similar to: install ncdf package on a 64-bit machine

Friends, I tried to install ncdf package in ubuntu with the following command. R CMD INSTALL --configure-args="-with-netcdf_incdir=/apps/netcdf/4.0.1/gcc/include -with-netcdf_libdir=/apps/netcdf/4.0.1/gcc/lib" ncdf_1.6.tar.gz The installation was stopped throwing the following error. I tried to google it but didnt find any solution. someone kindly write me what is going wrong. **

Dear R users I am attempting to add lncdf_1.6.tar.gz libraries within R, and have failed. I have R version 2.8.1, and are running on fedora 10 Kernel Linux 2.6.293.-60.fc10.x86_64. I've run R CMD INSTALL ncdf_1.6.tar.gz and I have the following --------------- * Installing to library '/usr/lib64/R/library' * Installing *source* package 'ncdf' ... checking for gcc... gcc

Greetings. I am attempting to add NetCDF libraries within R, and have failed. We have R version 2.8, and are running on a 64-bit Redhat Linux 2.6.18 kernel: Red Hat Enterprise Linux Client release 5.2 (Tikanga) Linux halfmoon.ncdc.noaa.gov 2.6.18-92.1.22.el5 #1 SMP Fri Dec 5 09:28:22 EST 2008 x86_64 x86_64 x86_64 GNU/Linux I have run the installation instructions found at

Dear all, I'm having issues with the installation of the ncdf package. It returns a non-zero exit status. Can anyone suggest what I should do next? FYI, I do not have problems installing other packages. Thanks. Muhammad * installing *source* package ?ncdf? ... checking for nc-config... /usr/local/bin/nc-config configure: creating ./config.status config.status: creating src/Makevars **

Dear all, working with R under Linux, I am not able to install the ncdf-package. The following appears: install.packages("ncdf") Warnung in install.packages("ncdf") : argument 'lib' is missing: using '/user/silke/R/x86_64-unknown-linux-gnu-library/2.6' --- Please select a CRAN mirror for use in this session --- Loading Tcl/Tk interface ... done versuche URL

Hello, I'm trying to install ncdf4 on RHEL 5.8, R version 2.15.1. Previously installed is netcdf 3.6.2 from Red Hat, so I've compiled and installed netcdf 4.2.1.1 (with hdf5 and zlib as per install instructions, and also set --enable-netcdf4 option) into /usr/local. When attempting to install ncdf4 it is failing with: ** testing if installed package can be loaded Error in

Hi All, I am trying to install ncdf package on a Linux 64-bit machine. I successfully installed netcdf using this command, ./configure --prefix=/home/challar/netcdf/ --disable-netcdf4 I then tried to install ncdf package in R R CMD INSTALL --configure-args="-with-netcdf_incdir=/home/challar/netcdf/include -with-netcdf_libdir=/home/challar/netcdf/lib" ncdf_1.6.3.tar.gz I get this

Buenas tardes, pido disculpas si mi consulta es demasiado elemental, pero actualmente encuentro una gran barrera para continuar mi trabajo si no lo solvento. Soy usuaria principiante de R, estoy trabajando con una base de datos climática <https://digital.csic.es/handle/10261/104742>que se encuentra en formato netcdf4 y necesito transformarla a la versión 3 con el fin de visualizarlo en un

Hi All, i'm on a debian linux 64bit, i'm tying to install the netcdf intraface, i tried both ncdf and ncdf4 but trying to build i received the error : (i have necdf installed on my machine and it is able to fiund it .. no missed .h) epy at epinux:~$ sudo R CMD INSTALL --configure-args="-with-netcdf_incdir=/usr/include -with-netcdf_libdir=/usr/lib" ncdf4_1.8.tar.gz *

Hello all, I set 'UDUNITS_PATH' and 'NETCDF_PATH' successfully to my custom places and then % R CMD INSTALL RNetCDF_1.1-3.tar.gz and got this: ... checking for executable suffix... checking for object suffix... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for main in -lnetcdf... yes checking for main in -ludunits...

Dear R communities Could you please help me with the problem I encounter while trying to install the ncdf package? download.packages("ncdf", "/home/user/soft/R/library/") cd /home/user/soft/R/library R CMD INSTALL ncdf_1.6.tar.gz # fail sudo R CMD INSTALL ncdf_1.6.tar.gz # fail cd /home/user/soft/ # download

Hi, I'm using the "ncdf" library for creating ncdf files. But I need to create about 100 variables per file (e.g. single rivers), So I do not like to create each variable separately. Unfortunately I found no way to make this work, as I'm unable to create a correct list of class "var.ncdf". ###code piece river=list(mode='var.ncdf', length=nriv)

Greetings all, I recently tried to install RNetCDF from within R (install.packages) on Fedora Core 8 (with netcdf 3.6.2 and netcdf-devel 3.6.2 already installed). This resulted in an error because the netcdf header files are installed in /usr/include/netcdf-3 rather than /usr/include which is where RNetCDF looks for them. This problem was described in a 2006 post (see below), but no

Hi everyone, I am a newbie in R and in this discussion list. I am trying to use R package "ncdf" to read values of temperature from a NCDF file. I did it before to another file using the function "get.var.ncdf", but now there is an error that I can not solve, and I would really appreciate if you could help me. I am using R version 2.11.1 (2010-05-31) in a machine with Linux

Friends, Someone please share your experience in installing ncdf and RNetCDF in fedora10. I am not able make it work as it throws me the following error. My R version is 2.8.0. > library(ncdf) unable to load shared library '/usr/lib/R/library/ncdf/libs/ncdf.so': /usr/lib/R/library/ncdf/libs/ncdf.so: cannot restore segment prot after reloc: Permission denied Error in library(ncdf)

I imagine this "where are your header files" problem comes up in other packages, so I'm asking this as a general R question. How should configure scripts be re-written so they look in more places? Briefly, the problem is that Fedora-Extras installs the header files in a subdirectory /usr/include/netcdf-3 rather than /usr/include: # rpm -ql netcdf-devel /usr/include/netcdf-3

Hello, I have a problem writing a variable to an existing file. Below is a part of my script and how it fails. I can't find "create.var.ncdf" in help Thanks for any help. Mark nc <- open.ncdf(ncname, readunlim=FALSE, write=TRUE ) missing <- 1.e+30 xdim <- nc$dim[["west_east"]] ydim <- nc$dim[["south_north"]] tdim <- nc$dim[["Time"]]

Dear all, I have a problem in writing a variable to a NetCDF-File. My code works pretty well until the step put.var.ncdf(): # Get variables #--------------------- data1 <- open.ncdf("PREC_me_03-1500.nc") prec1 <- get.var.ncdf(data1,"PRECT") dim.time <- get.var.ncdf(data1,"time2") close.ncdf(data1) # Calculation #--------------------- spi24.me <-

Hello I'm trying to install the "ncdf" package on a Ubuntu 10.04 laptop. Can you offer suggestions to install this package? > install.packages("ncdf", repositories = TRUE) Installing package(s) into ‘/home/steve/R/i486-pc-linux-gnu-library/2.12’ (as ‘lib’ is unspecified) --- Please select a CRAN mirror for use in this session --- Loading Tcl/Tk interface ... done

Hello, I'm running R 2.7.2 in a windows XP environment and I run the following in an R console: library(ncdf) nc <-open.ncdf('c:/file.nc') aa <- get.var.ncdf(nc,'var1') This works fine, but 'aa' takes up about 100mb and I want to release the memory after using it. I try: rm(aa) close.ncdf(nc) and look at Windows Task Manager, but the memory hasn't been