Displaying 20 results from an estimated 1000 matches similar to: "matrix to gal object"
2007 Feb 06
2
How to do "moran's I test"?
I want to do "moran's I test" in R language. I try to use "gearymoran" in
Package "ade4","moran" in Package "spdep", and Moran.I in Package "ape". But
I do not know how to do it because data format is different.
My data:
x y dbh
111.03 10.7 7
118.11 0.28 1.2
165.36 0.36 8.4
2007 Oct 15
1
Distance matrix in SpDep-package
Hello everybody,
I would like to use the SpDep-package (especially the Local Moran index
analysis and the Getis-Ord statistics) in R for analysing my data. However,
I don't have x-y coordinates, but my data is in a distance matrix format. Is
it possible to use the SpDep package with predefined distances as well
instead of letting the program determining the distance itself by the
function
2009 Feb 08
1
Help on computing Geary's C statistic to test for Spatial Autocorrelation
Dear Users:
I have been trying to use the geary.test() function in *R*, but am having
slight difficulty understanding how I am to apply it in my context.
I have 2 matrices:
1) *n x p* matrix of *n* observations with *p* measurements each. It may be
noted that this matrix has a spatial dimension to it, as the
*n*observations are at different geographical locations on a map.
2) *n x n* spatial
2004 Aug 23
2
Reading GAL file
Greetings:
I am trying to work with spdep (everything is "brand new" downloaded this morning). OS = Windows 2000 (also up to date). The code I am using follows:
#example
gal.county=read.geoda("lnpilnd.GAL", row.names=NULL, skip=0)
summary.nb(gal.county)
Error in summary.nb(gal.county) : Not a neighbours list
#end
The gal file works just fine in GeoDa (also up to date).
2011 Oct 18
1
cygwing warming when creating a package in windows
Dear All,
I am a beginner creating R packages. I followed the Leisch (2009) tutorial
and the document ?Writing R Extensions? to write an example.
I installed R 2.12.2 (I also tried R2.13.2), the last version of Rtools and
the recommended packages in a PC with Windows 7 Home Premium.
I can run R CMD INSTALL linmod in the command prompt and the R CMD check
linmod. The following outputs are
2007 Jul 08
2
Making Gehan-Breslow test for Survival data
Hi all,
The survivals functions can be tested by the Log-rank test and others, for
example the Gehan-Breslow. The graham breslow work with the alpha values.
But I don't know how is the Gehan-Breslow test with R. Somebody know a
type function?.. or other suggestions? Any help will be really
appreciated
Jos? Bustos
Marine Biologist
Master Apllied Stat Program
University of Concepci?n
2008 Apr 21
1
Analysis of Epidemiological Data Using R
Hi everyone,
I'm studying the manual name: Analysis of Epidemiological Data Using
R and Epicalc, maked by: Virasakdi Chongsuvivatwong and Edward McNeil.
And I can't find the data base that they use in some examples, this are
the names:
Chapter7.Rdata,Chapter8.Rdata,Chapter9.Rdata
Somebody can tell me how can I have this files?
Thk!
Jos?
O__ ---- Jos? Bustos M.
c/ /'_ ---
2008 Jul 03
1
R-help Digest, Vol 65, Issue 4
Hi everyone,
We are looking for some data sets working with relative risk mortality.
so, someone know where can I find the data.mgus dataset and the data.mgus?
Using 1384 records from Minnesota.
Thank!
O__ ---- Jos? Bustos M.
c/ /'_ --- Master Apllied Stat Program
(*) \(*) -- University of Concepci?n
2003 Nov 16
3
an object of class lm returned by lm?
Can someone tell me what an object of class lm returned by lm means? I
assumed it mean the regression model - but I'm not sure how to enter
this in. I have tried
y~a+b
but this is not working. I have also tried saving the regression
results and entering these, but again this is incorrect.
This language is from the following:
lm.LMtests(model, listw, zero.policy=FALSE,
2013 Nov 29
1
mat2listw function
Hi all,
I am attempting to create a weights object and perform a Moran I test as
well. I have a very large spatial weights matrix (roughly 22,000x22,000)
that was created in Excel and read into R, and I'm now trying to implement:
library(spdep)
SW=mat2listw(matrix)
I am getting the following error:
Error in if (any(x<0)) stop ("values in x cannot be negative"): missing
value
2010 Mar 25
1
*** caught segfault *** address 0x18, cause 'memory not mapped'
Hello R Community,
I've been run the following codes. However, I've been getting an
unusual segfault
that I'm unable to trace its origin. Please give me a light to
decipher the "caught segfault"
Thanks for you attention.
Bernardo.
> options(STERM='iESS', editor='emacsclient')
> rm(list = ls())
> > source("fgenIGLD.R") #RNG
2003 Jun 30
2
spatial correlation test
hello,
I want to do a test for spatial correlation.
I tried it with geary.test() but I don't understand the required input.
x= a numeric vector the same length as the neighbours list in listw (my
sampled data, I assume)
listw= a listw object created for example by nb2listw (well when I check
nb2listw() I get to "neighbours - an object of class nb" - but I couldn't
figure
2005 Feb 11
3
How to solve error : "cannot allocate vector of size 1208235 Kb"
Howdy R gurus !
I am newbie to R
I use R 2.0.1 in Windows XP. When I run R
I got the follwoing memory error.
My physical memory size is 3 Gb.
My R got the memory problem when it reached to
about 2 Gb.
Thanks in advance,
> library(spdep)
> sfr.lagsarlm <- lagsarlm(sfr.data$Bldgsqft ~ sfr.data$Ncounty + sfr.data$Nugb + sfr.data$Ngroup, data=sfr.data, listw=sfr.listw,
2009 Jun 06
1
large numbers of observations using ME() of spdep
Dear All,
We aim to remove the spatial structure of our data using Moran Eigen
Vectors and spdep package . Our data has 3694 samples and 13
variables.
The computer stop working after almost 4 days of processing (we found
it emitting a sharp sound and with all colors on the screen. No
wories, it was restared without problem!). And we are left with
nothing: no result file was produced since the
2009 Oct 09
1
svy / weighted regression
Dear list,
I am trying to set up a propensity-weighted regression using the
survey package. Most of my population is sampled with a sampling
probability of one (that is, I have the full population). However, for
a subset of the data I have only a 50% sample of the full population.
In previous work on the data, I analyzed these data using SAS and
STATA. In those packages I used a propensity weight
2011 May 04
1
Instrumental variable quantile estimation of spatial autoregressive models
Dear all,
I would like to implement a spatial quantile regression using instrumental variable estimation (according to Su and Yang (2007), Instrumental variable quantile estimation of spatial autoregressive models, SMU economics & statistis working paper series, 2007, 05-2007, p.35 ).
I am applying the hedonic pricing method on land transactions in Luxembourg. My original data set contains
2013 Apr 16
1
Spatial Ananlysis: zero.policy=TRUE doesn't work for no neighbour regions??
Hello,
I'm new to R and to Spatial Analysis and got a problem trying to create a
Spatial Weights Matrix.
*I us the following code to create the Neighbourslist:*
>library(maptools)
>library(spdep)
>library(rgdal)
>location_County<- readShapePoly("....")
>proj4string(location_County)<- CRS("+proj=longlat ellps=WGS84")
>location_nbq<-
2009 Jan 07
1
troubles performing Moran.I test
dear R users,
I have troubles performing Moran.I test as suggested on
http://www.ats.ucla.edu/stat/r/faq/morans_i.htm
my spatial data are longitude and lattitide of communities. The
calculation of the inverse distance matrix according to the homepage
(using my data)
datAL <- read.csv2("C:\\Konvergenz AL.csv", header=T)
ALdist <- as.matrix(dist(cbind(datAL$L?nge,
2006 Oct 26
6
Client-identifier option in PXE search order
Hello,
Is there any plan to use the client identifier field as part of the PXE
search order ?
This will be helpful when using PXELINUX on Infiniband network which do
not have 6 byte Ethernet MAC address.
Thanks,
_________________________________________________
Nir Gal | +972-9-9717685 (o) | +972-54-499-6633 (m)
Manager, Customer Support
Voltaire - The Grid Backbone
www.voltaire.com
2011 Feb 04
1
Error in solve.default(inf, tol = tol.solve) :
Hello,
I'm trying to run a lagsarlm (maximum likelihood estimation of a spatial lag model) in the spdep library ; but R gives following error message:
Error in solve.default(inf, tol = tol.solve) :
system is computationally singular: reciprocal condition number = 4.20137e-12
I get the same message when I try to run de lagsarlm with a bigger data set (4333 regions).
The command