similar to: color palette from red to blue passing white

Hi, The move to sRGB is nice, is there any interest in adding an interface to lcms, http://www.littlecms.com, to allow gamut matching? I can think of a lot of instances where I would like to render a figure as it would appear on my printer. This is probably best done as a separate package though, at least at first. Nicholas Martin Maechler wrote: >>>>>> "Paul" ==

Dear All, Is there any existing code for plotting silhouette for kmeans clustering results? Many thanks! Linda [[alternative HTML version deleted]]

I'm trying to convert an S-Plus program to R.  Since I'm a SAS programmer I'm not facile is either S-Plus or R, so I need some help.  All I did was convert the underscores in S-Plus to the assignment operator <-.  Here are the first few lines of the S-Plus file:   sshc _ function(rc, nc, d, method, alpha=0.05, power=0.8,              tol=0.01, tol1=.0001, tol2=.005, cc=c(.1,2),

I am trying to create a topographic map of an island - the filled.contour function works fine except i am experiencing difficulty trying to represent the sea properly. Basically I want the default colour blue for any instance where z=0, if I simply use the default topo.color I get shades of blue for z values up to 220 metres. Is there a way in which I can specify terrain.color for all values of

I have R version 2.9.1 on my computer and the anlaysis is not working because I need to update to R version 2.12.0 the latest release. The person incharge of IT tried to download R version 2.12.0 but .exe file referenced in install isn't there - What might we be doing wrong? We have downloaded as tar.gz, uncompress then look for .exe file but not present. Many thanks, Morris

I'm working on some heatmaps, and the person I'm working with would prefer a red-black-green color palette (red denoting gene induction and green denoting gene repression). Does such a palette exist already? If not, is there an easy way to create one? Thanks, Jake

Ah, but the interesting thing is that they are coming out with a 'clam' version like the 5MX. Details are limited at the moment, but that could mean the combination of 5MX usability with a supported linux distro. I am drooling in anticipation. Sounds like a "I've finally finished my PhD and deserve a treat" situation to me :) Dave On Thu, Mar 06, 2003 at 09:17:20AM

Hi, I am still new to R and have a programming question. I have created a small function which takes a parameter. In the function I want to be able to refer to the names of the variables sent to the function (specifically I want to be able to use the name of the variable given to the function in an output table). For example, in the following (fictional) function I want some way of printing

Dear All, [I'd already sent this message earlier (Apr 6) but as I had no response and I still see that it is the case in R1.5 I thought I'd try again] I recently encountered a problem (actually missed some data) because "white" is one of colours in the "default" palette and that does not show up to well on my transparent (on white background). Of course it is

Dear List Apologies for such a simple question: I have a vector of 738 elements, coded with values between 1 and 16 (but not containing 7, 10, 11 or 13) and wish to recode value 14 to 1, 4 to 2, 1 to 3, 2 to 4 and all other values to 5. I've been trying to use the replace function (in base) and %in%, but without success. Many thanks Roy

I just tried to install CentOS (x86_64 4.4 and i386 4.3, not both at once, when I found the 64bit version didn't boot, I tried the 32bit version, same result) on a dual Naconda Xeon system. I get an OOPS just after the IDE info is printed on the screen during boot (this is booting off the CD during the install phase). After mucking about with the bios settings (and many reboots later), I

Hi When I install NCL on my system. There are many error about X11 appeared. Such like: xdevice.c(40): catastrophic error: could not open source file "X11/Xlib.h" rasdraw.c(30): catastrophic error: could not open source file "X11/Intrinsic.h" w_idt.c(26): catastrophic error: could not open source file "X11/Intrinsic.h" X11_class0.c(39): catastrophic error: could not

Hi, for example one could do it this way: v <- summary(fit)$coefficients[,4] the coefficient attribute is a matrix, and with the "4" you refere to the pvalue (at least in lm - don't know if summary(glm) produces sligthely different output). to skip the intercept (1st row): v <- summary(glmfit)$coefficients[-1,4] hope this helps, Arne -- Arne Muller, Ph.D.

Dear list, I am plotting dots using distinct colors according to the species. Like the style of topo.colors(18), please kindly advise if any color vector exists for green, red, and blue. Thank you Elaine [[alternative HTML version deleted]]

Hello I'm very new to R (which is excellent), so apologies if this has already been raised. In the spdep package, I'm trying to undertake an autoregressive mixed model using the lagsarlm function. This is working fine, but there does not appear to be a method of including an explanatory variable without it automatically being included as a lagged term. I'm after something along the

Hello everyone, (This is my second question posted today on the R list). I am carrying out a competing risks analysis using the cuminc function...this takes the form: cuminc(ftime,fstatus,group) In my study, fstatus has 3 different causes of failure (1,2,3) there are also censored cases (0). "group" has two levels (0 and 1). I therefore have 6 different cumulative incidence curves:

Dear R users, I'm starting to get acquainted with R. I've been reading the manual, and I understood that if I wanted to install a user written package on R, I could do it directly from the Internet, by typing the line install.packages("quantreg") in an R session. To my surprise this command did not work, nor did the command "update packages from CRAN..." from the menu

Shown below is most of the FORTRAN subroutine named HCLUST. My question concerns the DO loop labeled as '10'. What happened to its CONTINUE statement? I will assume that after FLAG(I)=.TRUE. is executed that control returns to DO 10 I=1,N. Am I correct? Dave ---------------------------- C Initializations C DO 10 I=1,N C We do not initialize MEMBR in order to be able to

Is there anyone who can run .Net Framework 2.0 with the stable kernel 2.6.34 or 2.6.35? I can successfully install dotnet2 both with kernel 2.6.33 and 2.6.35, but can only run it when booting into kernel 2.6.33. With kernel 2.6.35 I don't have the permission as user to run dotnet2, and get an access denied. An example: Running AGS (Adventure Game Studio) with kernel 2.6.33 works fine. But

Dear R-help I have two separate experiments, one a repeated-measures design, the other a split-plot. In a standard ANOVA I have usually undertaken a multiple-comparison test on a significant factor with e.g TukeyHSD, but as I understand it such a test is inappropriate for repeated measures or split-plot designs. Is it therefore sensible to use Helmert contrasts for either of these designs?