similar to: Boxplots illustrating the fixed effects in a lme object

Dear all, W.XP I recently upgraded to R2.10.0 and did what I usually do: copied all "special" libraries from the old installation and then used "update.packages()" on the command line. Nothing happened. Then I clicked on the same command on the droplist which generated "update.packages(ask='graphics')", but still with no effect. When I tried to load the

Thanks a lot to Demitris for a prompt answer some minutes ago on another tread (see below). To avoid excess mails on the list, I move onto next question: I have another small plotting problem that confuses me. I want to plot results from a field trial series, using the numbers of the trials as symbols in the plot. pch = as.character(trial_no) works fine, but truncates the trial number to the

Dear all, W2k, R 2.5.1 I am trying out the AMMI function in the agricolae package, to analyse the dependence of environment for a certain cultivar. The function responds to four basic variables: ENV Environment GEN Genotype REP Replication Y Response My question concerns the 'REP' term. When I normally do an analysis of variance, the replication would refer to repeated observations

Dear all! W2k, R 2.5.1 I am working with an ongoing malting barley variety evaluation within Sweden. The structure is 25 cultivars tested each year at four sites, in field trials with three replicates and 'lattice' structure (the replicates are divided into five sub blocks in a structured way). As we are normally keeping around 15 varieties from each year to the next, and take in 10 new

Hello all! R2.0.1, W2k. All packages updated. I?m heavily dependant on using mixed models. Up til?now I have used lme() from nlme as I have been told to. Together with estimable() from gmodels it works smooth. I also often run Rcmdr, mostly for quick graphics. After using Rcmdr, on reopening the R workspace all help libraries for Rcmdr (22 !) loads, among them nlme, but not Rcmdr itself. Why?

Dear all R2.10 WinXP I have a dataset dealing with the way different wheat cultivars build their yield. Wheat ears are organised in spikelets where the spikelets can be numbered from the bottom, with even numbers on one side and odd on the other. I know how many kernels there were in each spikelet after some months spent counting them... Now I want to illustrate the differences between the

Hello all! R2.0.1, W2k I posted this question to the list last Sunday without getting any replies on the list. I got two off the list though, suggesting me to plot "manually" as a second step, from estimable() or intervals() objects respectively. As this was not really what I wished for, I take the risk to upset somebody with a trivial question, and re-post it (just a little

Hello all, R2.2.1, W2k I posted a similar question last week after having problem with a group update (using update.packages()), without getting any answer. Now I have updated all packages separately, and found that the problem comes from nlme: Everything comes home, the md5 checksums are ok, but then the old version can??t be removed from my computer, leaving a "nlme" library with

Hello all! I have a problem that calls for a better understanding, than mine, of how lme() uses the random part of the call. The dataset consists of eleven field trials (Trial) with three replicates (Block) and four fertiliser treatments (Treat). Analysing for example yield with lme() is easy: m1 <- lme(Yield ~ Treat, data=data, random =~1| Trial/Block) giving estimates of

Hello all, R2.1.1, W2k I try to make a plot of a simple regression model in this way: > with(njfA_bcd, { + plot(TC_OS.G31,Prot,cex = 2, col = "red", xlab= "TC/OS at GS32", + ylab="Grain crude protein (CP)") + }) This part works well and produces the datapoints as red circles. When I try to add a line, using a fitted linear model in a way that works perfect

Hello all! System: R2.0.1, W2k. All packages apdated with update.packages(). I use the default graphic device for my system (no active choice). I?m trying to fine-tune scatterplot() graphs (package car), for publication. I want to control plotting symbols and colours to match plots from other, less flexible, systems. I also need to make all text and symbols bigger, to enable printing of the

Hello everybody! I use R 1.6.2 in Windows, and have a problem controlling the na.action. In a dataset with twelve trials, one of the trials lack any readings of the variable "STS.SH" (standing power at harvest) Fitting an aov() object with the call: led1t7sts.aov <- aov(STS.SH ~ Trial/Block + Treatment + Treatment:Trial, data = led1t7, na.action=na.exclude) seems to work as it

Hello all, R2.1.1, Wk2 I am doing some two-step plotting, first using plot() to illustrate the datapoints and then using abline() to place a trend line from a fitted model into the plot. Everything works well as long as the formula of the fitted model i of the type: m1 <- lm(Dependent ~ Independent) then abline(m1) puts the proper straight line into the plot. But if I use: m2 <-

Hello all! I?ve been using Rcmdr for some time, as a quick way of producing graphics and basic statistics. I run R1.8.1, OS W2000. Two days ago the dataset loader stopped working. Normally, the button <No active dataset> is clickable to give you the opportunity to choose dataset to load in the Rcmdr context. Clicking on the button now produces this: Rcmdr Version 0.9-3 Error in parse(file,

Hello all! I recently switched mail program to Mozilla Thunderbird, running on W2k. Everything works fine, except the MIME-digests from this list. The decoding doesn??t work properly. I had contact with Martin Maechler some time ago, and he suggested a try on this list for ideas on how to do the decoding in Windows, even if it??s not a proper R-question. Outlook do the proper job on the MIME,

R2.1.0 JGR 1.2 W2k Hello all! I??ve just installed JGR on my both R-equipped computers and am very pleased with the look and functionality. Except in one, very important, way. I can??t figure out how to get the ~ sign from the keyboard to the console. Copying it from old code works fine. Using the traditional GUI works as usual. I have a Swedish keyboard layout, where ~ shares key with ??

Hello All, I have been looking over Tinc & VPE for a project and really like what I have seen in Tinc. In the VPE documentation, I came across: ----------------------------------------------------------- *connect = ondemand|never|always|disabled * Sets the connect mode (default: always). It can be always (always try to establish and keep a conenction to the given host), never (never

Does the /dev/urandom issue apply to Solaris 9 as well??? Thanks Ron -- Dr. Ronald Barker Senior Technology Manager Vodafone Group Research & Development - D Vodafone Pilotentwicklung GmbH Chiemgaustrasse 116 81549 Munich Germany Fon: + 49 (89) 95 410-0 Fax: + 49 (89) 95 410-111 mailto:ron.barker at v-pe.de http://www.vodafone-rnd.com <<Barker, Ron, vpe.vcf>>

Hi to all, We are a bit of newbes to imap etc, so may be we just not doing it right. Nevertheless, We have compiled dovecot to run under Solaris 8/9 for IPv6 test. We are going crazy. After a successful compilation, the troubles really began. Solaris 9 1. Every?time we reboot- the directory /var/run/dovecot/auth is gone ???? 2. After the dir is created manually, the server starts.

Hello everybody! I?m working with a dataset from eleven field trails on barley fertilization. I use R 1.6.2 (Windows) It is quite easy to fit aov() objects to the dataset. The call: > (l1t4y.aov <- aov(Yield ~ Trial + Treatment, data=led1t4b)) Results in an object with this anova table: Df Sum Sq Mean Sq F value Pr(>F) Trial 10 121423585 12142358 63.499