similar to: ylim in barplot2 function?

Dear R-list, Is there a way to convert the typical long R data-format to a 1-line per subject format? I have data formatted as: Group subj condition variable 1 1 1 746.36625 2 2 1 1076.152857 1 3 1 1076.152857 2 4 1 657.4263636 1 5 1 854.1266667 2 6 1 1191.676154 1 7 1 1028.175385 1 1 2 46.36625 2 2 2 76.152857 1 3 2 76.152857 2 4 2 57.4263636 1 5 2 54.1266667 2 6 2 191.676154 1 7 2 028.175385

Hi list, I'm currently processing textual data and I would really appreciate some help with one off my problems. I have a set of strings and I want to count how often each of this strings appears in this set. This is not very difficult and can be done as: TB<-table(my_set) plot(TB) However, I also want to collapse across sub-strings. This is, I want a sub-string ss of string S to be

Hi List, I have a problem plotting data using the lineplot.CI command in the sciplot package. I want to plot the data of 2 experimental cases using different lines (traces). Time is on the X-axis. The tricky thing is that the data collection in the second case started later than for the first case. This is to say: the first n data points for the second case are missing. So far so good. However,

Dear list, I have a data frame with a number of events (factor) and the times at which they occurred (continuous variable): event time A 10 A 12 B 15 A 17 C 13 ... Is it possible in R to make a plot against time of the cumulative frequency of occurrence of each event? This would be, a raising line for each factor. Regards, Dieter

Hello, I'm currently trying to find a method to interpolate or smooth data that represent a trajectory in space. For example, I have an ordered (=time) set of (x,y) tuples which constitute a path in a 2D space. Is there a way using R to interpolate between these points in a way similar to spline interpolation so that I get a smooth path in space? Greetings, Dieter -- Dieter Vanderelst

Hi All, I have an R script that spawns output in the form of an HTML page. This is done by the R2HTML package. Now I want to run the same script using Rcmd BATCH. However, it seems that it is not possible to use R2HTML in this case. My script ends with this error message: ######################### Error in dev.print(png, file = AbsGraphFileName, width = Width, height = Height, : can only

Hello, I get a nice looking barplot using the barplot2 function in the gregmisc package: body2 <- barplot2(hh3, beside = TRUE, col = c("mistyrose", "lightcyan"), .... cex.names = 1.0, plot.ci = TRUE, ci.l = cil, ci.u = ciu, plot.grid = TRUE) box() However, obviously I lose the collors when converting from ps to a pdf (outside of R)

I'm using barplot2 to plot some data. Is there any way to determine the width of the bars in the generated plot? I know that barplot2 returns a list of the coordinates of the center of each bar, but since there is some white space between each bar, I don't know how to get the width of each bar. Jamie

Dear All, I have the following data coming out from s <- with(final, summarize(norm, llist(gtt,fdiab), function(norm) { n <- sum(!is.na(norm)) s <- sum(norm, na.rm=T) binconf(s, n) }, type='matrix') ) ie gtt fdiab norm.norm norm.norm2 norm.norm3 18

Hello, I would like to know if it's possible to modify the name of groups of bar because on my barplot2, I have 5 groups of bars and one of them is called "User Contributes" and when I save the plot "User contributes" is to big so I don't have it on my plot! Is it pssible to put the name vertically! Thanks! Sabine --------------------------------- ils, photos

Hi R-users, I inted to make multiple plots using for loop. The question is how can I adjust the left hand side margin of the plot according to the names.arg argument in barplot2. In every plot I have different annotations in the y axis and they vary in length. Now when I have fixed margins opar <- par(mar=c(3,15,0,2)... I get the same margins in all of the plots. That leaves lots of white

Hello, I try to handle a simple bar-plot, but it turns out to be not as simple as I thought. 1) I have created a .dat-File, e.g. test.dat: DATA DATA-SEM 2.2 0.32 6.2 1.30 12.7 1.61 48.6 3.08 4.1 0.86 4.5 0.32 1.5 1.13 1.2 1.08 The first row is the data represented by bars. The second row deals with the Standard Error of Mean. The lines correspond to time-intervals of experiments. 2) I now

Dear R users, I am trying to build a barplot2 graph however I can't find a way of defining the scale for the x-axis. I would like to show in my x-axis only the numbers 0, 25, 50, 75 etc. (so far R is giving me a random scale hard to interpret and it doens't look nice...). Could anyone advise me on how to do this please, it would be a great help! Thank you. Below I show the code I have

R-Users, I am working with gplots (in gregmisc bundle) plotting some posterior probabilities (using barplot2) of harvest bag limits for discrete data (x-axis from 0 to 12, data is counts) and I ran into a couple of questions whose solutions have evaded me. 1) When I create and include the confidence intervals, the lower bound of the confidence intervals for several of the posterior probabilities

Dear List, I'm trying to interpret the results of the Kruskal's Non-metric Multidimensional Scaling algorithm (isoMDS, MASS package). The 'goodness of fit' is reported as "The final stress achieved (in percent)". What does this mean exactly? I've tried to google for an answer but I've not come up with a definitive answer. Regards, Dieter -- Dieter Vanderelst

Hi All, I'd like to see the function code behind the barplots2() function in the gplots package, however i come across a bit of a stumbling block of a hidden function, can anyone help? > library(gplots) > methods(barplot2) [1] barplot2.default* Non-visible functions are asterisked > barplot2 function (height, ...) UseMethod("barplot2") <environment:

I am performing this sequence barplot title legend abline When abline renders the lines they appare to be in the layer above the bars in the graph. Is there a way to make them render first or 'behind' the bars? Thanks.

Dear R Users, (and dear Marc) First of all many thanks for the answers to my previous questions. I would like to barplot the mean percent change of a variate with it's CI. Bars should start from the zero reference line to height (in barplot2). Is there a way to tweak barplot2, for example, to do that ? I have tried to see what the function was but unlike other functions was not able to

Hi How do I install "gregmisc" packages? I did- % sudo R > install.packages("gregmisc") . . > barplot2() but, Error: couldn't find function "barplot2" -- atuya Mac OSX 10.2.6 R 1.7.1

Hi, help.I would like to plot the mean and standard deviation against a factor in the xaxis- in other words I want an errorplot. I also want to put the standard deviation like a "T" on top of a barplot. How can do this in R Bragadeesh