similar to: Trouble installing package 'sp' in R 2.4.1

Hi, I am having troubles trying to install package "sp" in R (2.13.0) on mac OSX. I have tried installing the package using GUi or function install.packages but it didn't work. Here is the error message I get: also installing the dependency ‘rgdal’ trying URL 'http://cran.univ-lyon1.fr/src/contrib/rgdal_0.6-33.tar.gz' Content type 'application/x-gzip' length

Hi Team, I am trying to very simple plot with command plot. Question : I am trying to plot (x,y) based on the value of Column e. If column e value is greater than 0 then plot(x,y) otherwise do not plot it. Data : structure(list(x = c(1, 1, 1, 2, 2, 2, 3, 3, 3), y = c(1, 2, 3, 1, 2, 3, 1, 2, 3), e = c(0, -1, -2, 1, 0, -1, 2, 1, 0)), row.names = c(NA, -9L), .Names = c("x",

This is the first time that I have tried to update packages with a tinkered around with .Rprofile. I start R with R --vanilla and it does not load my .Rprofile, but when I issue the command update.packages() R downloads the packages as expected, but then seems to load .Rprofile before compiling the packages sources. What am I doing wrong? kindest regards, Stephen Sefick see- Session info

While running a long script which source()s other scripts I get the following warning: Warning message: In t(object$S[[1]]) : bytecode version mismatch; using eval I cannot replicate it if I run the sourced files line by line though... What is that error? And do I care about it? It doesn't seem to affect my output as far as I can tell. Thanks! Justin > sessionInfo() R version

I don't understand what is happening! I have a (large) object sim1, an matrix list with dim c(101,101) where each element is an 3*3 matrix. I am subsetting that with a matrix coo, of dim c(100,2), of unique indices, but the resulting object has length 99, not 100 as expected. Code reproducing the problem follows: library(RandomFields) set.seed(123) sim0 <- GaussRF(x=seq(0, 100, by=1),

Dear all, I get the error when I use maxent.jar: Error .jcall(mxe, "S", "fit", c("autorun", "-e", afn, "-o", dirout, : java.lang.NoSuchMethodError: density.Params.readFromArgs([Ljava/lang/String;)Ljava/lang/String; sessionInfo() result: R version 2.14.0 (2011-10-31)Platform: i386-pc-mingw32/i386 (32-bit)locale:[1]

Dear R-listers, I am trying to assign colnames to a data frame within a loop, but I keep getting a "target of assignment expands to non-language object"-error. I need to split up a large dataset into about 20 smaller ones, and I would like to assign colnames within the loop, so I won't have to type the same thing 20 times over. I have concocted this really goofy example which

Hi I want to change a control parameter for an nls () as I am getting an error message "step factor 0.000488281 reduced below 'minFactor' of 0.000976562". Despite all tries, it seems that the control parameter of the nls, does not seem to get handed down to the function itself, or the error message is using a different one. Below system info and an example highlighting the

Hi everybody I have found something (for me at least) strange with duplicated(). I will first provide a replicable example of a certain kind of behaviour that I find odd and then give a sample of unexpected results from my own data. I hope someone can help me understand this. Consider the following # this works as expected ex=sample(1:20, replace=TRUE) ex duplicated(ex) ex=sort(ex) ex

Hi I bought a new laptop HP dv9500 just a week ago and installed a Ubuntu gutsy ribbon on this laptop. I wanted to install Fedora but there are more threads on Ubuntu, so I decided to install Ubuntu. After hours of struggle in configuring x server/graphic card stuff, I installed R for Gutsy ribbon using "sudo apt-get install g77 r-core'. Now when I tried to install 'sp' package

I get an error when using self-defined (not standard) functions with mapply with S4 objects from the raster package that I develop: "Error in as.character(sys.call(sys.parent())[[1]]) : cannot coerce type 'closure' to vector of type 'character'". Does anyone understand why? The problem is illustrated below. Thanks, Robert > # First a general example that works

ComRades: I am geeting the error message Error in ldots[[which(MET)]] : attempt to select less than one element when I try to fit the geostatistical model with the likfit() function of geoR. I have tried with old data for which likfit() successfully maximised the likelihood in previous versions of geoR, and yet the current version fails. I have tried in Windows Vista and Windows XP (I haven't

Hello list I am trying to use a Googlemaps tile (png file, 640 X 640 px tile) as a background to a plot and have been using the rgdal library to read in the PNG file (modified from code in the RGoogleMaps package). This works OK. My problem is is that the SGDF2PCT function in rgdal seems to be limited to 256 colors and this is introducing (I think) some degradation to the image which appears on

Hi, I am seeking help with an error when running the example from R Documentation for TukeyHSD. The error occurs with any example I run, from any text book or website. thank you... > plot(TukeyHSD(fm1, "tension")). Error in plot(confint(as.glht(x)), ylim = c(0.5, n.contrasts + 0.5), ...) : error in evaluating the argument 'x' in selecting a method for function

I have escaped Splus for Windows (mostly) and have started using R (v 2.3.1 on i686 redhat). Installing packages has been routine except for "sp" (classes and methods for spatial data). I get the following error message > install.packages("sp") Warning in download.packages(unique(pkgs),destdir=tmpd,available=available,: no package 'sp' at the

Hi all, I've read the R for windows FAQ and am a little confused re: memory.limit and memory.size to start using R 2.6.2 on WinXP, 2GB RAM, I have the command line "sdi --max-mem-size=2047M" Once the Rgui is open, memory.limit() returns 2047, memory.size() returns 11.315, and memory.size(max=T) returns 19.615 Shouldn't memory.size(max=T) return 2047? Upon running several

Hi all, I have 20 data frames, named frame1, ... , frame20. Each data frame has the dimension 20x5. I need to build a function that calls out the observation in Row 1, Col 2 from all 20 data frames and places it in a vector of length 20. I have tried the following code: vect <- rep(0,20) for(i in 1:20){ vect[i] <- paste("frame",i,"[1,2]",sep="") } The

I installed R (R-2.4.1-win32.exe) on a new computer with Windows Vista and a 64 bit operating system (hp dv9000 with intel core t7200). The base R runs fine, but I can not get any of the packages to load. From within R I choose install packages choose a site then a package. I tried installing 2 packages and get similar errors (see below), I just copied and pasted lines from R. Can anyone

Dear all, I have a problem with the command 'getURL' from the RCurl package, which I have been using to obtain a ftp directory list from the MOD16 (ET, DSI) products, and then to download them. (part of the script by Tomislav Hengl, spatial-analyst). Instead of the list of files (from ftp), I am getting the complete html code. Anyone knows why this might happen? This are the steps i

Dear All, I need to do something relatively simple: generate a map of Europe and paint the various states with different colors (only 3-4 are needed) according to a rule. I would like to keep it as simple as possible and the script resorting to the sp package that I found at http://bit.ly/Oc71ub is exactly what I am looking for (I need to repeat the exercise with Europe instead of