Displaying 20 results from an estimated 6000 matches similar to: "generating lognormal variables with given correlation"
2007 Sep 17
1
Create correlated data with skew
Hi all,
I understand that it is simple to create data with a specific
correlation (say, .5) using mvrnorm from the MASS library:
> library(MASS)
> set.seed(1)
>
> a=mvrnorm(
+ n=10
+ ,mu=rep(0,2)
+ ,Sigma=matrix(c(1,.5,.5,1),2,2)
+ ,empirical=T
+ )
> a
[,1] [,2]
[1,] -1.0008380 -1.233467875
[2,] -0.1588633 -0.003410001
[3,] 1.2054727 -0.620558768
2011 Aug 26
2
How to generate a random variate that is correlated with a given right-censored random variate?
Hi,
I have a right-censored (positive) random variable (e.g. failure times subject to right censoring) that is observed for N subjects: Y_i, I = 1, 2, ..., N. Note that Y_i = min(T_i, C_i), where T_i is the true failure time and C_i is the censored time. Let us assume that C_i is independent of T_i. Now, I would like to generate another random variable U_i, I = 1, 2, ..., N, which is
2009 May 29
1
Mean of lognormal in base-2
Hi, Does anyone know what the mean value of a lognormal distribution in base-2 is? I am simulating stochastic population growth and if I were working in base-e, I would do:lambda <- 1.1 #multiplicative growth rates <- 0.6 #stochasticity (std. dev)lognormal <- rlnorm(100000, log(lambda) - (s^2)/2, s)## or lognormal <- exp( rnorm( 100000, log(lambda) - (s^2)/2,
2012 Oct 12
1
better example for multivariate data simulation question-please help if you can
Dear?All,
?
a few weeks ago I have posted a question on the R help listserv that?some of you have responded to with a great solution, would like to thank you for that? again.?I thought I would reach out to you with the issue I am trying to solve now. I have posted the question a few days ago, but probably it was not?clear enough, so I thought i try it again.?At times I have a multivariate example
2006 Aug 05
1
AIC for lognormal model
Dear all,
I want to compare some different models for a dataset by QQ plots and AIC. I get the following AICs:
- linear model: 19759.66
- GAMLSS model: 18702.7
- linear model with lognormal response: -7862.182
The QQ plots show that the lognormal model fits better than the linear model, but still much worse than the GAMLSS. So, in my opinion, the AIC of the lognormal model should be between the
2004 May 01
2
Generating Lognormal Random variables (PR#6843)
Full_Name: Anthony Gichangi
Version: 1.90
OS: Windows XP Pro
Submission from: (NULL) (130.225.131.206)
The function rlnorm generates negative values for lognormal distribution.
x- rlnorm(1000, meanlog = 0.6931472, sdlog = 1)
Regards
Anthony
2007 Sep 07
1
How to obtain parameters of a mixture model of two lognormal distributions
Dear List,
I have read that a lognormal mixture model having a pdf of the form
f(x)=w1*f1(x)+(1-w1)*f2(x) fits most data sets quite well, where f1
and f2 are lognormal distributions.
Any pointers on how to create a function that would produce the 5
parameters of f(x) would be greatly appreciated.
> version
_
platform i386-pc-mingw32
arch i386
os
2010 Dec 27
3
Gamma & Lognormal Model
Dear,
I'm very new to R Gui and I have to make an assignment on Gamma Regressions.
Surfing on the web doesn't help me very much so i hope this forum may be a
step forward.
The question sounds as follows:
The data set is in the library MASS
first install library(MASS)
then type data(mammals)
attach(mammals)
Assignment:
Fit the gamma model and lognormal model for the mammals data.
2012 Oct 11
2
Help on probability distribution question
Dear All,
I have a questions I would like to ask about and wonder if you have any thoughts to make it work in R.
1. I work in the field of medicine where physiologic variables are often simulated, and they can not have negative values. Most often the assumption is made to simulate this parameters with a normal distribution but in the "log-domain" to avoid from negative values to be
2008 Feb 22
1
fitting a lognormal distribution using cumulative probabilities
Dear all,
I'm trying to estimate the parameters of a lognormal distribution fitted
from some data.
The tricky thing is that my data represent the time at which I recorded
certain events. However, in many cases I don't really know when the event
happened. I' only know the time at which I recorded it as already happened.
Therefore I want to fit the lognormal from the cumulative
2010 Aug 01
2
Lognormal distribution - Range Factor
Hi, What does it mean to say Lognormal distribution with a mean of 1.03E-6
with a range factor of 100 ? How can I find the lognormal distribution
paramters from this information?
Thanks, Tims
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2004 Dec 13
1
AIC, glm, lognormal distribution
I'm attempting to do model selection with AIC, using a glm and a lognormal
distribution, but:
fit1<-glm(BA~Year,data=pdat.sp1.65.04, family=gaussian(link="log"))
## gives the same result as either of the following:
fit1<-glm(BA~Year,data=pdat.sp1.65.04, family=gaussian)
fit1<-lm(BA~Year,data=pdat.sp1.65.04)
fit1
#Coefficients:
#(Intercept) Year2004
# -1.6341
2009 Jan 16
3
Fitting of lognormal distribution to lower tail experimental data
Hi,
I am beginner with R and need firm guidance with my problem. I have seen
some other threads discussing the subject of right censored data, but I am
not sure whether or not this problem can be regarded as such.
Data:
I have a vector with laboratory test data (strength of wood specimens,
example attached as txt-file). This data is the full sample. It is a
common view that this kind of data
2010 Mar 26
1
Poisson Lognormal
Hi R Users,
I'm going to estimate via. ML the parameters in Poisson Lognormal
model. The model is:
x | lambda ~ Poisson(lambda)
lambda ~ Lognormal(a,b)
Unfortunately, I haven't found a useful package allowing for such
estimation. I tried to use "poilog" package, but there is no equations
and it's hard to understand what exactly this package really does.
Using it I get the
2002 Dec 10
1
Lognormal distribution
I am trying to fit a lognormal distribution to a set of data and test its
goodness of fit with regard to predicted values.
I managed to get so far:
> y <- c(2,6,2,3,6,7,6,10,11,6,12,9,15,11,15,8,9,12,6,5)
> library(MASS)
> fitdistr(y,"lognormal",start=list(meanlog=0.1,sdlog=0.1))
meanlog sdlog
1.94810515 0.57091032
(0.12765945) (0.09034437)
But I would
2011 Nov 01
1
low sigma in lognormal fit of gamlss
Hi,
I'm playing around with gamlss and don't entirely understand the sigma
result from an attempted lognormal fit.
In the example below, I've created lognormal data with mu=10 and sigma=2.
When I try a gamlss fit, I get an estimated mu=9.947 and sigma=0.69
The mu estimate seems in the ballpark, but sigma is very low. I get similar
results on repeated trials and with Normal and
2008 Oct 07
3
Fitting weibull, exponential and lognormal distributions to left-truncated data.
Dear All,
I have two questions regarding distribution fitting.
I have several datasets, all left-truncated at x=1, that I am attempting
to fit distributions to (lognormal, weibull and exponential). I had
been using fitdistr in the MASS package as follows:
fitdistr<-(x,"weibull")
However, this does not take into consideration the truncation at x=1. I
read another posting in this
2005 May 03
2
comparing lm(), survreg( ... , dist="gaussian") and survreg( ... , dist="lognormal")
Dear R-Helpers:
I have tried everything I can think of and hope not to appear too foolish
when my error is pointed out to me.
I have some real data (18 points) that look linear on a log-log plot so I
used them for a comparison of lm() and survreg. There are no suspensions.
survreg.df <- data.frame(Cycles=c(2009000, 577000, 145000, 376000, 37000,
979000, 17420000, 71065000, 46397000,
2005 Mar 24
2
Bivariate lognormal distribution
Dear experts!
Is there a package that enables to create the bivariate log-normal variables?
Thanks a lot,
Vicky Landsman.
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2003 Apr 09
3
plotting the lognormal density curve
I am trying to plot a lognormal density curve on top of an existing
histogram. Can anybody suggest a simple way to do this? Even if someone
could just explain how to plot a regular normal density curve on top of an
existing histogram, it would be a big help.
Also, is there some way to search through the R-help archives other than
simple browsing?
Thank you so much. Your help and time is greatly