similar to: Fwd: RSPerl buffer overflow

Hello, I am having errors when I try to install RSPerl-0.92 under fedora 14. I have the following rpms installed: R-devel-2.13.0-1.fc14.x86_64 R-core-2.13.0-1.fc14.x86_64 perl-5.12.3-143.fc14.x86_64 perl-devel-5.12.3-143.fc14.x86_64 perl-ExtUtils-* (all of them from yum) Now I get the following errors: # R CMD INSTALL RSPerl_0.92-1.tar.gz * installing to library ‘/usr/lib64/R/library’ *

Hi, I'm wanting to call R from Perl via the RSPerl package. However I cannot seem to install it on my Macbook (OS X Tiger - R 2.6 - Perl 5.8.6). I try to install the source downloaded from the sigmahat website - but it seems to fail - when I search my system for R.pm - I can't find it? Something looks to be going wrong with the make bits? Cheers David M ---- $ R CMD INSTALL

Folks, I am having trouble installing RSPerl on a redhat 6.x box, in which i am an ordinary user, the R install is done as a shared library. I get the following message when i do a R INSTALL RSPerl Any help would be greatly appreciated, thanks & regards Krishna ---------------------------------------------------------------------------- Support R in Perl: updating cache ./config.cache

Hi, I am having problems installing RSPerl 0.92-1 in my Mac OSX 10.5.1. I?ve installed correctly R-2.6.1 with the .mpkg. I run the next command: <R CMD INSTALL --configure-args=' --with-in- perl ' RSPerl> And the next error message appears: RSPerl * Installing to library '/Library/Frameworks/R.framework/Resources/ library' * Installing *source* package

Hello everyone, I am probably not the only one having trouble with this package but here goes. I want to install XML on Ubuntu. I installed libxml2-dev and everything works out fine until I get the following: Error in reconcilePropertiesAndPrototype(name, slots, prototype, superClasses, : No definition was found for superclass "namedList" in the specification of class

I tried to build (and install) XML_3.95-0.1.tar.gz on FreeBSD 10.0-CURRENT amd64, but it stopped during the check of R_HAS_REMOVE_FINALIZERS (full log appended): ---------------------------------- R CMD INSTALL XML_3.95-0.1.tar.gz [..snip..] Checking for 1.8: -DR_HAS_REMOVE_FINALIZERS=1 -I/usr/local/include/libxml2 -I/usr/local/include Using libxml2.* checking for gzopen in -lz... gcc46

Dear R-list, I'm struggling installing RGtk2 on my Mac. Has anybody succeeded in doing so? I've got Gtk2.8 (finally) and I have R2.0.1 I'm using ibook G4 and Mac 10.3.9 and here is the error I got from installing > R CMD INSTALL ~/Desktop/install/RGtk2_2.8.0-0.tar.gz * Installing *source* package 'RGtk2' ... checking for pkg-config... /sw/bin/pkg-config checking

Hi, I hope someone has seen this problem before. I am trying to install the XML package from http://cran.r-project.org/src/contrib/XML_0.95-6.tar.gz. Using > R CMD INSTALL XML_0.95-6.tar.gz I get the following error message: /usr/vac/bin/xlc_r -I/usr/local/lib/R/include -DLIBXML -I/opt/freeware/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1

I am currently using R 2.15.0 with R Tools 2.15 (in Windows XP). I downloaded the source for RGgobi and extracted it to a folder.   Then I tried compiling and installing with the following command and got an error message: -------------------------------------------------------------------------------------------- D:\Work\tmp>R CMD INSTALL --build "D:\\DPF\\Rggobi\\rggobi" *

Dear all, I have an error message installing SJava package. So I searched web site(google) and R-mailing list to find a similar error message. But I couldn't find it. I installed R-2.1.1 like this on Fedora Core4 1) /configure --enable-R-shlib --with-libpng --with-jpeglib 2) make -> make check -> make install and then issuing on shell prompt (red lines are error messages) R CMD

I am currently using R 2.15.0 with R Tools 2.15 (in Windows XP). I downloaded the source for RGgobi and extracted it to a folder.   Then I tried compiling and installing with the following command and got an error message: ------------------------------------------------------------------------------------------------------------------ D:\Work\tmp>R CMD INSTALL --build

Colleagues, How i can solve this error when i install SJava package Thanks ---------------- R CMD INSTALL -c /usr/local/lib/R/SJava_0.69-0.tar.gz * installing to library ?/usr/local/lib/R/site-library? * installing *source* package ?SJava? ... checking for java... /usr/lib/jvm/java-6-sun/bin/java Java VM /usr/lib/jvm/java-6-sun/bin/java checking for javah... /usr/lib/jvm/java-6-sun/bin/javah

Hi, I installed SJava 0.66-1 on my linux RH 7.2 machine. I am using R-1.7.1. I set LD_LIBRARY_PATH up then called library(SJava) and it was fine. But when I called .JavaInit(), I got weird error that states it could not find java/lang/Hashtable. The session is below and shows my java configuration. I am using j2sdk1.4.2_01 from Sun. Thank you very much. Weiming Zhang > .javaConfig

Dear List, I'd like to call pyhton function from within R. I tried installing the latest version of RSPython: wget http://www.omegahat.org/RSPython/RSPython_0.7-1.tar.gz R CMD INSTALL --clean RSPython_0.7-1.tar.gz I get a compile error (posted below). Did anyone else run against this ? Is there a solution ? checking for python... /usr/bin/python Python version 2.6 Using threads checking

Thanks for your help Duncan. Your last comment helped me to figure out what FreeBSD was doing differently than Linux/Solaris. This fix worked on a machine with Python 2.1, R 1.3.1 and FreeBSD 4.1. Here are the details: The pthreads fix: I added '-lc_r' to the PKG_LIBS definition in src/Makevars.in. The FreeBSD 'man pthread' page suggests that adding -pthread to the gcc statement

Hello, I tried the R-Sig-Mac list with this query, but had no takers. I hope that the following isn't too far off the mark for this list. Many thanks in advance if someone can help me out! Quick summary: I can't get RSPerl working on a PPC G5 with the pre-compiled binary for Mac OS X, but it does work if I compile R from source with the "--enable-R-shlib" flag. If I

Hi, installation of RSPerl works fine without errors. Running RSPerl does not work at all. If I start R, and then enter this command: library(RSPerl) this error appears: ----------------- > library(RSPerl) Error in dyn.load(x, as.logical(local), as.logical(now)) : unable to load shared library "/usr/local/lib/R/library/RSPerl/libs/RSPerl.so":

Dear list, I have updated to version R-2.10.0. When I try to load the RSPerl library I get the following error: > library(RSPerl) Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared library '/usr/local/lib/R/library/RSPerl/libs/RSPerl.so': /usr/local/lib/R/library/RSPerl/libs/RSPerl.so: undefined symbol: boot_DB_File__Glob Error: package/namespace load failed

Hi, I'm trying to install de RSPerl module and i have some problems trying to test it. I've tried to contact with the author but the e-mail address seems not to exist. Hope that anyone in this list could explain me a little about this problem. I have a bash shell and what i do is the following: #PERLLIB=/usr/lib/R/library/RSPerl/share/blib/arch:/usr/lib/R/library/RSPerl/share/blib/lib #

Hi, I am somewhat new to R and RSPerl, but I think this particular problem has to do with RSPerl and so I am not sure if this is the right forum to ask for help. Nevertheless I am quite sure that many of you would have used RSPerl with R. My hardware platform is a Sun/Solaris V440 server running Solaris 9 operating system I use the gcc-3.4.0 compiler to compile R without any problems. My