similar to: Confidence intervals of quantiles

Dear, I want to make an application to calculate quantile within a For() I tried the following without success: ej. date p_val <- matrix(sample(10, 1000, replace=TRUE), 200,5) test 1 rr <- paste("p_val$",names(p_val[1]), sep="") quant <- quantile(rr, probs = c(0, 10, 20, 30, 40, 50, 60, 70, 80, 90, 100)/100, na.rm=FALSE, type=1) test 2 rr <-

All, I have been trying to get the following code to work: A.quantiles <- quantile(foo.frame$A, probs = seq(from = 0.05, to = 0.95, by = 0.05)) base.quantiles <- quantile(Efficacy205$BASELINE_RANK, probs = seq(from = 0.05, to = 0.95, by = 0.05)) gender <- levels(Efficacy205$GENDER) contrast.1 <- contrast(Model.1, list(TPCODE= 'A', AGE =

Dear R-Experts I am sure this might look simple question for experts, at least is problem for me. I have a large data frame with over 1000 variables and each have different distribution( i.e. have different quantile). I want to create a new grouped data frame, where the new variables where the value falling in first (<25%), second (25% to <50%), third (50% to <75%) and fourth quantiles

Hi r-users, I have a matrix B and a list of 3x3 matrices (mylist). I want to calculate the quantiles in the list using each of the value of B as probabilities. The codes I wrote are: B <- matrix (runif(12, 0, 1), 3, 4) mylist <- lapply(mylist, function(x) {matrix (rnorm(9), 3, 3)}) for (i in 1:length(B)) { quant <- lapply (mylist, quantile, probs=B[i]) } But quant

Hello everybody, after searching around for quite some time, I haven't been able to find a package that provides a function to compute the Windorized mean and variance. Also I haven't found a function that computes the trimmed variance. Is there any such package around? thanks, Roberto

Hello Everyone, I'm currently learning about quantile regressions. I've been using an optimizer to compare with the rq() command for quantile regression. When I run the code, the results show that my coefficients are consistent with rq(), but the intercept term can vary by a lot. I don't think my optimizer code is wrong and suspects it has something to do with the starting

I am trying to calculate quantiles of a data frame column split up by two factors: # Calculate the quantiles quarts = tapply(gdf$tt, list(gdf$Runway, gdf$OnHour), FUN=quantile, na.rm = TRUE) This does not work: > quarts 04L 04R 15R 22L 22R 27 32 33L 33R 0 NULL Numeric,5 NULL Numeric,5 NULL Numeric,5 NULL Numeric,5 NULL 1 NULL

Hi, I want to compute the quantiles of Chi^2 distributions with different degrees of freedom like x<-cbind(0.005, 0.010, 0.025, 0.05, 0.1, 0.5, 0.9, 0.95, 0.975, 0.99, 0.995) df<-rbind(1:100) m<-qchisq(x,df) and hoped to get back a length(df) times length(x) matrix with the quantiles. Since this does not work, I use x<-c(0.005, 0.010, 0.025, 0.05, 0.1, 0.5, 0.9, 0.95, 0.975,

I'm trying to obtain the mean of the middle 95% of the values from each row of a matrix (that is, the highest and lowest 2.5% of values in each row are removed before calculating the mean). I am having all sorts of problems with this; for example the command: apply(matrix1,1,function(x) quantile(c(.05,.90),na.rm=T)) returns the exact same quantile values for each row, which is clearly

I have a simple doubt: I have a function, say: test <- function (theta) { return (theta^2) } I can use: integrate (test,0,1) to obtain the area under de function. Can I do the opposite? I`d like to give the lower limit and the area I need as arguments, in order to get the upper limit. In other words, I`d like to obtain the quantile of the function (the lower limit could be 0, for example).

Hello, I am using Dr. Harrell's design package to make a nomogram. I was able to make a beautiful one without stratifying, however, I will need to stratify to meet PH assumptions. This is where I go wrong, but I'm not sure where. Non-Stratified Nomogram:

Hi folks, I'm having some trouble understanding the intricacies of panel functions. I wish to create three side-by-side graphs, each with different data-- so far, so good: I rbind() the data, add a column of subscripts as a conditioning variable, load up the lattice package, specify either a c(3,1) 'layout' or work through 'allow.multiple' and 'outer' and I'm

Hello, I have a question regarding shading regions under curves to display 95% confidence intervals. I generated bootstrap results for the slope and intercept of a simple linear regression model using the following code (borrowed from JJ Faraway 2005): > attach(allposs.nine.d) > x<-model.matrix(~log(d.dist,10))[,-1] > bcoef<-matrix(0,1000,2) > for(i in 1:1000){ +

I have used PCA for data classification by visual examination of the 3D scatter plot of the first 3 principal components. I now want to use the results to predict the class for new data. I have used predict.princomp to predict the scores and then visualise the results on a 3D scatter plot using the rgl library. However, is there an R function that will fit the new data to the class assignments

Dear all. I have a question on plotting the coefficients from a series of mutivariate quantile regressions. The following code plots the coefficients for each RHS variable x1 and x2. Is there a way to plot only the coefficients on x1? In the data I am using, I have a large number of fixed effects and do want to plot the coefficients on these fixed effects. quant.plot <-

I'm trying to work out the simplest way to remove the upper and lower quantiles, in this case upper and lower 25% from an array. I can do it in two steps but when I try it in one, it fails. Is there something simple missing from my syntax or are there other simple elegant way to accomplish this? Thanks J > i <-1:20 > i2 <- i[i<quantile(i,.75)] > i3 <-

bradleyd wrote > Excuse the request from an R novice! I have a data frame (DATA) that has > two numeric columns (YEAR and DAY) and 4000 rows. For each YEAR I need to > determine the 10% and 90% quantiles of DAY. I'm sure this is easy enough, > but I am a new to this. > >> quantile(DATA$DAY,c(0.1,0.9)) > 10% 90% > 12 29 > > But this is for the entire

Dear friends, I'm probably wrong but is there anything better than bootstrap to get a confidence interval of the median from a population with unspecified distribution ? Best wishes Troels Ring, Aalborg, Denmark

Dear List, quantile(x) function allows to obtain specified quantiles of a vector of observations x. Is there an analogous function to compute quantiles in the case one have the vector of the observations x and the correspondent vector f of relative frequencies ? Thank you Paolo Radaelli [[alternative HTML version deleted]]

Given a dataset x, the ecdf is ecdf(x). Then I can use ecdf(x)(y) to find the percentile of y. Given the ecdf is there a way to determine what is the value of y that is the boundary of let's say 95 percentile? In other words, is there a function I can call on the ecdf like: fomeFunc( ecdf( x ), 0.95 ) Which will return the highest value of y, for which ecdf( y ) < 0.95? The only solution