similar to: Plot window - save as Postscript question

Dear R graphics gurus, Another question about lattice graphics. This time I would like to plot means and confidence intervals by group factor in a lattice graph. I can not find any working lattice examples. Maybe a custom panel function is the answer, but that is a bit beyond me for now. The individual plots within the lattice graph could look like this: # Example with confidence intervals

Hi R-users, I inted to make multiple plots using for loop. The question is how can I adjust the left hand side margin of the plot according to the names.arg argument in barplot2. In every plot I have different annotations in the y axis and they vary in length. Now when I have fixed margins opar <- par(mar=c(3,15,0,2)... I get the same margins in all of the plots. That leaves lots of white

Dear All, I have the following data coming out from s <- with(final, summarize(norm, llist(gtt,fdiab), function(norm) { n <- sum(!is.na(norm)) s <- sum(norm, na.rm=T) binconf(s, n) }, type='matrix') ) ie gtt fdiab norm.norm norm.norm2 norm.norm3 18

Hello, I get a nice looking barplot using the barplot2 function in the gregmisc package: body2 <- barplot2(hh3, beside = TRUE, col = c("mistyrose", "lightcyan"), .... cex.names = 1.0, plot.ci = TRUE, ci.l = cil, ci.u = ciu, plot.grid = TRUE) box() However, obviously I lose the collors when converting from ps to a pdf (outside of R)

I am making a barplot using barplot2 from gplots where each bar represents a specific tree species. I have formatted the species names on the x-axis so that the genus name is above the species name and have then rotated the labels 45 degrees to save room. This is my code: >columncolor<-c("grey20", "grey20", "grey20", "grey70",

R users, I have a problem with function strwidth in 2.7.1. I'm trying to set the plot margins in a way that horizontal column labels will fit to the graph. tmp.t is a list of data.frame objects. This code works well in 2.6.0. ...snip.. library(gplots) for (i in names(tmp.t)) { bmp(filename=paste(i, "_", Sys.Date(), ".bmp", sep=""), width=1038,

Given this example mean.values<-colMeans(VADeaths) mean.values<-apply(VADeaths, 2, mean) median.values<-apply(VADeaths, 2, median) dotchart(VADeaths, gdata=mean.values) dotchart(VADeaths, gdata=median.values) is it possible to ?combine? a single dotchart showing both the mean and the median for each single group (with different plotting symbols)? ?is it that possible with the use of

Dear R users, using dotplot (R1.2.0, WinNT4.0), I am trying to change the character size of the labels of the points: > # example > data(VADeaths) > dotplot(VADeaths, main = "Death Rates in Virginia - 1940") > # I'd like to have smaller character size of the labels (for age and population groups) > ?dotplot > # for argument "cex", this says:

Hallo, What is the right way to get vertical bars in a barchart? For instance barchart(VADeaths, key=simpleKey(colnames(VADeaths),points=F,rectangles=T)) gives what I need, only I would like the bars to be vertical. But barchart(VADeaths,horizontal=F, key=simpleKey(colnames(VADeaths),points=F,rectangles=T)) does not give what I need, and I do not understand how to change the

Hi All, I'd like to see the function code behind the barplots2() function in the gplots package, however i come across a bit of a stumbling block of a hidden function, can anyone help? > library(gplots) > methods(barplot2) [1] barplot2.default* Non-visible functions are asterisked > barplot2 function (height, ...) UseMethod("barplot2") <environment:

I have found a bug/feature with barplot that at least to me shows undesireable behaviour. When using barplot and plotting fewer groups/levels/factors(I am unsure what they are called) than the number of colors stated in a col statement, the colors wrap around such that the colors are not fixed to one group. This is mostly problematic when I make R figures using scripts, since I sometimes have

It seems that there is a problem in displaying subtitle in general, independently from multi-plot display. when I do plot (c(1,2,3), c(9,8,7), type = "l") title(main = "Main title", sub ="Sub title",cex.main=2, cex.sub = 2) subtitle doesn't get displayed > --- On Sat, 11/21/09, David Winsemius <dwinsemius at comcast.net> > wrote: >

Dear R Users, (and dear Marc) First of all many thanks for the answers to my previous questions. I would like to barplot the mean percent change of a variate with it's CI. Bars should start from the zero reference line to height (in barplot2). Is there a way to tweak barplot2, for example, to do that ? I have tried to see what the function was but unlike other functions was not able to

I am trying to send a manuscript to a journal. One of the figures build by R is in the right orientation and 4 are rotated clockwise 90 deg in the preview. I used the right click save to PS option and I used the command line postscript("c:/temp/fig04.eps",bg="transparent",onefile = TRUE ,pointsize=20,paper = "letter",height=8,width=8,horizontal=FALSE,family =

Hello, I want to create a figure that consists of a collection of 16 graphs on 4 rows. I am using nf <- layout(matrix(seq(1,16), 4,4, byrow=TRUE), respect=TRUE) boxplot(... to create the layout of my 16 graphs. It works really well. However, I'd like to add sub-titles that would apply to each row of 4 graphs. More specifically, I'd like to have something like: subtitle 1

Hi list, I'm using barplot2 form the gplots package to plot a few numbers (I want to add SD bars later). However, I would like the y-axis not to start from 0 but 500. When I add the parameters YLIM, something goes wrong. The graph is not 'cut off' at 500. Instead the bars seems to sink trough the bottom of the graph. Because its a little hard to explain, here is a self-containing

I'm using barplot2 to plot some data. Is there any way to determine the width of the bars in the generated plot? I know that barplot2 returns a list of the coordinates of the center of each bar, but since there is some white space between each bar, I don't know how to get the width of each bar. Jamie

Is the width= parameter in barplot() supposed to work? I couldn't get it to work in my plot, and even in the example, data(VADeaths, package = "base") barplot(VADeaths, width=rep(0.1, 4)) the plot looks identical regardless of what I put in for the width. I looked at the source for barplot() and it looks like it SHOULD work (but what do I know). Am I doing something wrong?

hi everybody, I noticed the following: in one of my scripts 'layout' is used to generate a (approx. square) grid of variable dimensions (depending on no. of input files). if the no. of subplots (grid cells) becomes moderately large (say > 9) I use a construct like ###layout grid computation and set up occurs here### ... opar <- par(no.readonly = T);

I'm plotting obesity rates (y-axis) vs Public Health Unit (x-axis) for the province of Ontario and would like to have the Public Health Unit names appear vertically rather than the default, horizontally. I'm actually using the 'barplot2' function in the {gregmisc} library ... I haven't been able to find a solution in either the barplot2 options or the general plotting