Displaying 19 results from an estimated 19 matches similar to: "subset question"
2006 Dec 08
1
question for if else
I have a data set like this
I want to assign "outward" to Y if sc <90 and assign "inward" to Y if sc>=90.
then cbind(p1982,Y) to get like these
p aa as ms cur sc Y
1 154l_aa ARG 152.04 108.83 -0.1020140 92.10410 inward
2 154l_aa THR 15.86 28.32 0.2563560 103.67100 inward
3 154l_aa ASP 65.13 59.16 0.0312137 7.27311 outward
4 154l_aa CYS 57.20 49.85
2006 Dec 12
1
Is my data set too large
I have a data set like this.
I want to do glm, but I get this error:
Error in model.matrix.default(mt, mf, contrasts) :
cannot allocate vector of length 932889958
I am wondering if my data set is too large or I did something wrong.
Is there some limitation for data size for R?
thanks,
Aimin
> p1982<- read.csv("p_1982_aa.csv")
> names(p1982)
[1] "p"
2006 Dec 08
1
(no subject)
I have a data set like this:
if I want to less than 200000 obs from this data set.
How can I do these?
> str(p1982)
'data.frame': 465979 obs. of 6 variables:
$ p : Factor w/ 1982 levels "154l_aa","1A0P_aa",..: 1 1 1 1 1 1 1 1 1 1 ...
$ aa : Factor w/ 19 levels "ALA","ARG","ASN",..: 2 16 4 5 18 3 19 3 2 9 ...
$ as : num 152.0
2006 Oct 24
2
for help
I have a question in R.
In directory H:/Delta_angle
I have 19 files like this:
ALA.delta
ASN.delta
ASP.delta
CYS.delta
GLN.delta
GLU.delta
HIS.delta
ILE.delta
LEU.delta
LYS.delta
MET.delta
PHE.delta
PRO.delta
SER.delta
THR.delta
TRP.delta
TYR.delta
VAL.delta
I want to read these files to 19 data sets in R.
All these data sets have "P","AA",index","delta"
2004 Nov 10
1
Samba BDC with LDAP support
Hi,
PDC works fine, but Samba BDC doesn't make its job.
In srvmgr.exe PDC, BDC appear, but when I kill smb
PDC's process, normaly BDC may give a response to smb
request.
My problem... BDC do not respond, no PDC :: no
authentification.
any idea.
my smb.conf :
[global]
# Main Config.
netbios name = LYS
workgroup = TNN
server string = Lys (TNN's PDC)
security = user
domain
2002 Apr 24
1
Fwd: need help in ssh client: key exchange
This is debugs seen on server, whose keys are
not accepted by the client:
debug1: Seeding random number generator
debug1: sshd version OpenSSH_2.5.2p2
debug1: load_private_key_autodetect: type 0 RSA1
debug1: read SSH2 private key done: name rsa w/o
comment success 1
debug1: load_private_key_autodetect: type 1 RSA
debug1: read SSH2 private key done: name dsa w/o
comment success 1
debug1:
2004 Jul 14
0
forward_msg: no 2nd via found in reply
Hi everybody,
I'm trying to use Asterisk as SUA with SER. But Asterisk doesn't
succeed to register the Asterisk user to SER... the standard error output of
SER tell me:
"ERROR: forward_msg: no 2nd via found in reply"
the SIP message looks like:
to 193.175.133.19:5060
Retransmitting #5 (no NAT):
REGISTER sip:potemkin.fokus.fraunhofer.de SIP/2.0
Via: SIP/2.0/UDP
2012 Oct 22
0
Help with a R script using grid
Dear Dr. Murrell
Sorry to bother you at home, so to speak, but my emails to r-help at r-project.org
are falling into the void.
I am trying to make a multiple panel plot with 26 rows and 2 columns
with plots from a tool (genoPlotR) that is layered on grid. My code
and session info are below. When I execute the code, I get a single
plot in the center of the graphics page. I have tried
2001 May 08
1
sftp problem
I am trying to resolve an issue with SSH2 version 2.5.2p2 on Solaris 2.6.
SSH2, SSH1 and SCP all work fine in and out. The problem is with SFTP. I
can SFTP out, but not in. I can't SFTP into itself. After I issue the
command, I get a password prompt. After I give the password, the connection
closes with an Exit Status 127. There are 3 other system configure the same
and everything is
2006 Jun 18
2
analyze amino acid sequence (composition)of proteins
Dear R-helpers:
thank your for your attention.
i am a newer to R and i am doing some protein category classification based on
the amino acid sequence.while i have some questions urgently.
1. any packages for analysis amino acid sequence
2. given two sequences "AAA" and "BBB",how can i combine them into "AAABBB"
3. based on "AAABBB",how can i get some
2006 Nov 20
4
for help about logistic regression model
I have a dataset like this:
p aa
index x y z sdx sdy sdz delta as
ms cur sc
1 821p MET 1 -5.09688 32.8830 -5.857620 1.478200 1.73998 0.825778
13.7883 126.91 92.37 -0.1320180 111.0990
2 821p THR 2 -4.07357 28.6881 -4.838430 0.597674 1.37860 1.165780
13.7207 64.09 50.72 -0.0977129 98.5319
3 821p GLU 3 -5.86733 30.4759
2006 Apr 20
0
Major internal changes, TI DSP build change
>> You found it. The SHL32 (not SHR32) line fixes the problem. It must be
>> doing a 16-bit shift, then extending the result (which is reasonable).
>> As
>> it happens, that it the same macro which gave us trouble last May
>> (25th/26th), when the C55 build was more subtlely broken.
>
> Yes, that's what I finally remembered. I think I've fixed all
2011 Jul 20
2
bar chart issue
Hi everyone,
I determined the presence of three types parasites in a passerine bird
over two years. I would like to create a bar chart that shows the
proportion infected on the y and year/parasite on the x such that each
type of parasite is grouped together (single label) and a bar for each
year . This would show if there have been changes in the prevalence of
a the parasite over two years.
1999 Dec 01
2
R and XML -- a near perfect combination?
Please ignore my ignorance, I'm new to R,
but starting a longish project that will use R a lot.
(a computer scientist learning about stats at the
same time).
Did anybody alreay write a XML parser for R?
XML, as we will have tons of data-interchange with
all sorts of other programs and XML is good for giving
meaning to raw data.
I checked the FAQs and the documentation, but didn't find
1999 Dec 03
1
R-help Digest V1 #34
R-help Digest Friday, December 3 1999 Volume 01 : Number 034
In this issue:
[R] model.tables
Re: [R] Installing R on Slackware Linux
Re: [R] Installing R on Slackware Linux
[R] nlmin
Re: [R] nlmin
Re: [R] nlmin
Re: Summary: [R] Wanted: online Introduction to R
[R] Applying a function of several variables to data
Re: [R] R and XML -- a near perfect
2013 Feb 21
1
Problem with managesieve proxy
Hi folks,
I'm setting up a new dovecot email service and have a proxy server running in
front of it to facilitate migrating users from my very old UW-IMAP-based mail
server to the new one.
I have a mysql proxy table that directs inbound IMAP and LMTP connections to
the correct server, works great. Managesieve connections are not working
through the proxy using either with the sieverules
2004 Apr 28
1
Autoreply: Protected message
This mailbox is unmonitored. Mail sent to this address is not received or read.
I am unable to offer support for general technical issues via private e-mail. I only provide support via the newsgroups, so that others may benefit from the solution to a given problem. In addition, many others will see your post, and may have an answer that I do not. If your message was a follow up to a post I
2006 Apr 19
2
Major internal changes, TI DSP build change
> You found it. The SHL32 (not SHR32) line fixes the problem. It must be
> doing a 16-bit shift, then extending the result (which is reasonable). As
> it happens, that it the same macro which gave us trouble last May
> (25th/26th), when the C55 build was more subtlely broken.
Yes, that's what I finally remembered. I think I've fixed all
occurrences (by adding EXTEND32)
2009 Jul 23
1
[PATCH server] changes required for fedora rawhide inclusion.
Signed-off-by: Scott Seago <sseago at redhat.com>
---
AUTHORS | 17 ++++++
README | 10 +++
conf/ovirt-agent | 12 ++++
conf/ovirt-db-omatic | 12 ++++
conf/ovirt-host-browser | 12 ++++