similar to: alpha-channel transparency in filled.contour

Hi everyone, I hope this question is beyond "read the manual". My task is simple, just to plot the following, but the plot in the middle should be a filled.contour plot: http://gallery.r-enthusiasts.com/graph/Scatterplot_with_marginal_histograms_78 Background: I prefer filled.contour rather than hist2d. Because, I could use kernel smooth, so the plot for discrete data won't be too

Quick question - I am having problems creating an orographic image (similar to volcano example). I have created a map matrix with 3 columns and over 2million rows. I have created the matrix as follows: map<-read.table("map.dat",header=TRUE) long.grid<-sort(unique(map$long) lat.grid<-sort(unique(map$lat) map.matrix<-matrix(map$height,nrow=length(lat.grid),byrow=TRUE) The

Dear all, I can't figure out a way to have more than one plot using filled.contour() in a single plate. I tried to use layout() or par(), but the way filled.contour() is written seems to override those commands. Any suggestions would be really appreciated. Jonathan [[alternative HTML version deleted]]

hello - a question about filled.contour plots, for which i haven't found a response in previous posts - sorry if already treated. i'd like to draw several filled.contour plots (that is, maps) on the same device (a postscript file, actually). I know about layout(matrix) , split.screen or par(mfrow) : it works well for simple plots, but with filled.contour plots, i get several pages

In order to gain a bit more control over the fill contour functionality I'm trying to use the Internal filledcontour function. I wasn't able any documentation on this function and only one reference to it. I believe the code shown below is close because all the dimensions seem to be correct, but I'm still getting a "dimension mismatch" error and the filled contour

Hi all, Does anybody know how to add contour lines to a filled contour plot? I want to draw a single contour around values that are above a certain level (e.g., significant). The problem I'm having is that since the filled.contour command actually draws two plots (data and the key), adding contour lines paints them over both plots. Any suggestions? Thanks, Andy #~~~~~~~~~~~~~~~~~~~

The following plot is a first approximation to what I need: *********************************** mu1 <- 0 mu2 <- 5 s <- 1 x <- seq(-2.5, 7.5, length = 41) y <- seq(-2.5, 2.5, length = 41) f <- function(x,y){ term1 <- 1/(2*pi*sqrt(s*s)) term2 <- -1/2 term3 <- (x - mu1)^2/s term4 <- (y - mu1)^2/s term5 <- (x - mu2)^2/s term1*(.5 * exp(term2*(term3 + term4)) + .5 *

I'm trying to make a set of contour plots of bivariate kernel density estimates, showing three such plots overlaid, similar to this plot http://euclid.psych.yorku.ca/SCS/Private/Test/ridge-boot2.pdf except that I would like to have the contours *filled* (using transparent colors). To make this reproducible, I've saved the results of KernSmooth::bkde2D() in the following file:

hello everyone, I was wondering if anybody can help me solve 2 problems related to the function filled.contour. I am entering the following R command: filled.contour(xx,yy,P1, nlevels=20,color=cm.colors, plot.axes={ contour(xx,yy,P1,add=T,col="grey", nlevels=20, drawlabels=F) axis(1,1:length(xx),labels=xlabels)

I was trying to add points to filled.contour plots, but the points(...) function apparently uses a different coordinate system than the filled.contour(...) function; it appears that points(...) paints points where they would be if the contours were stretched over the whole plotting frame including the legend bar. Am I missing something or is it a "misalignment" in the code? BTW, I have

First time user, so sorry if I don't understand protocol.. Anyway, I have created a data frame consisting of pearson's R values at various x and y coordinates and then plotted this using filled.contour. My data is similar to fMRI data except that it is a surface map reconstructed from histological sections. I like the results but would like to know how contours were detected. Google search

Hi. I'm a big user of level plots. Because filled.contour() didn't do exactly what I wanted, I hacked at it a bit to add these options: (*) Even spacing in the key, even if the contours are not evenly spaced. (*) Horizontal key (*) options to not use layout() and to plot only the level plot _or_ only the key. This means you can use layout yourself to (e.g.) have several

Hello, I'd like to remove color bar from "filled.contour" plot. Is it possible and how? I also want to overlay "contour" plot on filled.contour but due to scaling of the "filled.contour" to account for the color bar, aspect ratio for "contour" is different from "filled.contour". Can this problem be solved? Thanks, Mark

Hi, Is there a way to make the filled.contour() function produce a plot similar to the image() function? i.e. not have smooth contours but rather distinct "squares" corresponding to the different cells of the matrix. The reason I ask is because since image doesn't have an option to display colour bars it is a lot less useful. Cheers Muri Soares Department of Maths and Applied

Hola a todos: Yo pensaba que la diferencia entre contour y filled.contour radicaba, simplemente, en que la segunda pintaba con colores los espacios entre las curvas de nivel, pero haciendo lo de abajo aparecen diferencias require(gplots) celdas <- 5 m <- matrix(10,celdas,celdas) m[3,3] <- 20 m[2,2] <- 20 m[1,] <- m[celdas,] <- m[,celdas] <- m[,1] <- 20 image(m,asp=1)

I am attempting to create a contour plot using R with this code: > contour <- as.matrix(read.csv("contour.csv", row.names=1, header=TRUE)) > library(gplots) > filled.contour(contour, main="Flume 1 Flow Velocities") Now this produces the image/plot that I am looking for perfectly. However, the both axes only go from 0 to 1 instead on of using the row and column

Dear All, I have a question on overlaying a filled.contour (e.g. on soil properties data) and contour (by elevation) in one graph. Both have the same z matrix dimension. I'm able to overlay both graph, but the plots dimension did not overlap well on the same plots. How can I have both filled.contour and contour on the same graph? The commands that I have written are as follows:

Dear R help contributors, I'd like to plot ground temperature with time on X-axis and depth on Y-axis on this datasets ( http://r.789695.n4.nabble.com/file/n3301033/NEdaily.csv NEdaily.csv ), and to do so I use the following commands: library(RSEIS) xNE <- seq(1, as.numeric(as.Date(max(NEdaily[[1]])) - as.Date(min(NEdaily[[1]]))), 1) yNE <- rev(c(-0.3, -0.5, -0.7, -0.9, -1.1,

Hi R-help community, Can anyone tell me why, while using : x <- seq(as.Date("2001-01-01"),as.Date("2001-01-01") + nrow(volcano)-1,1) y <- seq(1, ncol(volcano),1) when I plot the volcano matrix with that command : filled.contour(x,y,volcano) the graph has a Date format on X-axis, ok ... ... but when adding a contour plot to the filled contour, using this

Dear R-users, I haven't found a way in the searchable archive to overplot a contour (lines) over a surface. I have a (n,m) matrix that represents sea surface temperature that I have plotted using image.plot(), filled.contour() or image(). I would like to overplot this image with some contour lines of mixed layer depth values(same size matrix). How can I do this? Any help is appreciated,