Displaying 12 results from an estimated 12 matches similar to: "about MCMC pack again..."
2006 May 11
1
about MCMC pack
Hello,
I tryed to use the MCMC pack, particularly the function MCMCirtKd to
simulate the posterior distribution in a multidimensional IRT model.
The code I used is:
posterior1 <- MCMCirtKd(Y, dimensions=2,
item.constraints=list("V2"=list(3,0)),
burnin = 1000, mcmc = 10000, thin=1, verbose = 1, seed = NA,
alphabeta.start = NA, b0 = 0, B0=0, store.item = FALSE,
2005 Sep 02
1
source package linking problem under linux
I'm having some problems in installing some source packages under linux.
As an example, MCMCpack. An error is raised when linking:
> install.packages("MCMCpack")
[...]
* Installing *source* package 'MCMCpack' ...
checking for C++ compiler default output file name... a.out
checking whether the C++ compiler works... yes
checking whether we are cross compiling... no
checking
2004 Oct 31
2
Error Message: MCMCpack and coda
Hello All,
I'm trying to run a one-dimenional irt model using the packages MCMC and
coda on a rather large set of roll-call voting data with many missing
observations. Here's a sample of the code:
Post10<-
MCMCirt1d (Italy10, burnin = 1000, mcmc=50000, thin=100, verbose=TRUE,
theta.constraints = list(V549=1, V443=-1))
The MCMCirt1d command seems to work fine, but when I try to
2006 Aug 14
0
missing data treatment in MCMC pack
Hello,
does anyone know something about missing data in the MCMC pack?
thank you,
Mariagiulia
Mariagiulia Matteucci
Dipartimento di Scienze Statistiche ?Paolo Fortunati?
Universit? di Bologna
Via Belle Arti, 41
40126 Bologna (ITALY)
e-mail: matteucci at stat.unibo.it
TEL: +39 051 264182
FAX: +39 051 232153
2005 Mar 28
1
mixed model question
I am trying to fit a linear mixed model of the form
y_ij = X_ij \beta + delta_i + e_ij
where e_ij ~N(0,s^2_ij) with s_ij known
and delta_i~N(0,tau^2)
I looked at the ecme routine in package:pan, but this routine
does not allow for different Vi (variance covariance matrix of
the e_i vector) matrices for each cluster.
Is there an easy way to fit this model in R or should I bite the
bullet and
2007 Apr 05
1
Running MCMCpack
Hi there,
I am running MCMCpack (MCMCirt1d model) on some files (26 items x about 800
– 1200 individuals).
I have a problem. When I am working on “big” files, the R program crashes.
More precisely I got the following Microsoft Warning:
*******************************************
Microsoft Visual C++ Runtime Library
Runtime Error!
Program: C:\Program Files\R\R-2.4.1\bin\Rgui.exe
2003 Apr 18
1
MCMCpack gelman.plot and gelman.diag
Hi,
A question. When I run gelman.diag and gelman.plot
with mcmc lists obtained from MCMCregress, the results are following.
> post.R <- MCMCregress(Size~Age+Status, data = data, burnin = 5000, mcmc = 100000,
+ thin = 10, verbose = FALSE, beta.start = NA, sigma2.start = NA,
+ b0 = 0, B0 = 0, nu = 0.001, delta = 0.001)
> post1.R <- MCMCregress(Size~Age+Status, data
2011 Aug 10
2
function runif in for loop
Hello,
I'd like to perform a regression using MCMCregress (MCMCpack).
One variable therefore should be a function rather than a variable:
I want to use X as an input and X should be defined as a random number between to values. Therefore I want to use the function runif like:
X <-(1, Xa, Xb) but it seems that runif doesn't allow to use vectors.
So I think I've to calculate the new
2006 Dec 07
0
Help to understand an Error using summary to an mcmc object
Hi,
I used the MCMCirtKd function of MCMCpack:
posterior2 <- MCMCirtKd(data, dimensions = 2,
+ burnin = 5000, mcmc = 50000, thin = 10,
+ verbose = 10000, B0 = .25, store.item = TRUE, item.constraints =
beta.constraints)
And after apply the comand summary() I got some erros and warnings that I
could not understand:
summary.posterior2 <- summary(posterior2)
2011 Aug 15
2
MCMC regress, using runif()
Hello,
just to follow up a question from last week. Here what I've done so far (here an example):
library(MCMCpack)
Y=c(15,14,23,18,19,9,19,13)
X1=c(0.2,0.6,0.45,0.27,0.6,0.14,0.1,0.52)
X2a=c(17,22,21,18,19,25,8,19)
X2b=c(22,22,29,34,19,26,17,22)
X2 <- function()runif(length(X2a), X2a, X2b)
model1 <- MCMCregress(Y~X1+X2())
summary(model1)
but I am not sure if my X2-function is
1998 Jul 08
0
Supplemental groups in samba
Hi,
We're running samba-1.9.18p8 on a few different platforms (mostly IRIX and
AIX.)
I have noticed that we don't seem to have supplemental group support. We
have a group file shared by NIS, and some directories are controlled by
group.
For example:
We have a share here called cs whose path is /home/cs/common. Under that
directory we have /home/cs/common/ta. The "ta"
2008 Feb 03
1
Effect size of comparison of two levels of a factor in multiple linear regression
Dear R users,
I have a linear model of the kind
outcome ~ treatment + covariate
where 'treatment' is a factor with three levels ("0", "1", and "2"),
and the covariate is continuous. Treatments "1" and "2" both have
regression coefficients significantly different from 0 when using
treatment contrasts with treatment "0" as the