similar to: Tick marks in lines.survfit

I have attempted to follow posting guidelines but I have failed to find out what I am doing wrong here. I am trying to use lines.survfit to plot a second curve onto a survival curve produced by plot.survfit. In my case this is to be a progression free survival curve superimposed upon an overall survival curve, but I will illustrate my problem using the example given in the help for

I am sorry that this is another novice question. I am having trouble using "legend" with the survival curve plot from the survival package, and I wonder if it is because I have rescaled my plot. Here is the relevant segment of code: > plot(survfit(Surv(OS,Status)~shortishcr1),main='Overall Survival by factor', + xlab='Years',ylab='%

Hi Dear R-users I have a database with 18000 observations and 20 variables. I am running cox regression on five variables and trying to use survfit to plot the survival based on a specific variable without success. Lets say I have the following coxph: >library(survival) >fit <- coxph(Surv(futime, fustat) ~ age + rx, data = ovarian) >fit what I am trying to do is plot a survival

R 2.8.1 Windows XP I am trying to plot the results of a coxph using plot(survfit()). The plot should, I believe, show two lines one for survival in each of two treatment (Drug) groups, however my plot shows only one line. What am I doing wrong? My code is reproduced below, my figure is attached to this EMail message. John > #Create simple survival object >

Dear all, I am trying to produce survfit plots in a trellis environment and I would like the plots to be logarithmic. I am trying this: print(Ecdf(~time | size*type, groups=alg,data=B,subscripts=TRUE, panel=function(x,groups,subscripts) { t <- survfit(Surv(time[subscripts],event[subscripts])~groups[subscripts],data=B)

I am sorry to trouble the list with this, but I'm hoping that someone will be able to help me track down this reference. I am looking for a good reference on repeated measures, and many of the relevant functions in R refer in their "help" to: Hand, D. J. and Taylor, C. C. (1987) _Multivariate Analysis of Variance and Repeated Measures._ Chapman and Hall. This sounds

Dear all, is there a way to produce survfit plots in a trellis environment? I am trying this: print(Ecdf(~time | size*type, groups=alg,data=B,subscripts=TRUE, panel=function(x,groups,subscripts) { t <- survfit(Surv(time[subscripts],event[subscripts])~groups[subscripts],data=B,conf.type="none")

I hesitate to post this question in the light of recent threads, indeed I have hesitated for several weeks, however I have come to a full stop and really need some help if I am going to progress. I am a new user of R for medical statistics. I have attempted to read all the relevant documents, but would welcome any suggestions as to what I have missed. I am trying to contruct "table 1"

Hi all, Using: R version 2.8.1 Patched (2009-03-07 r48068) on OSX (10.5.6) with survival version: Version: 2.35-3 Date: 2009-02-10 I get the following using the first example in ?summary.survfit: > summary( survfit( Surv(futime, fustat)~1, data=ovarian)) Call: survfit(formula = Surv(futime, fustat) ~ 1, data = ovarian) time n.risk n.event survival

I am dying here with linphone (not sure if it is crap software or just me being an idiot) but out of the box debian installations of two linphones fail with a "Got SIP response 415 "Unsupported Media Type" back from 192.168.1.3" Can anybody recommend a particular SIP soft phone that broadly satisfies the following criteria? 1. Run on linux. 2. Simple to use and setup. 3. Is

Ok, I finally got the slideshow code to a state worth showing it off. The site is a very rough cut of a site I''m building for my wife''s photography, so ignore the unfinished design for now :) http://rachel.kathihill.com/ To see the ajax version, go to: http://rachel.kathihill.com/?ajax=1 To randomize the order the images show: http://rachel.kathihill.com/?random=1 To change

For adjusted survival curves I took the sample code from here: https://rpubs.com/daspringate/survival and adapted for my date, but got error. I would like to understand what is my mistake. Thanks! #ADAPTATION FOR MY DATA library(survival) library(survminer) df<-read.csv("F:/R/data/base.csv", header = TRUE, sep = ";") head(df) ID start stop censor sex age stage treatment 1

For adjusted survival curves I took the sample code from here: https://rpubs.com/daspringate/survival and adapted for my date, but ... have a QUESTION. library(survival) library(survminer) df<-read.csv("base.csv", header = TRUE, sep = ";") head(df) ID start stop censor sex age stage treatment 1 1 0 66 0 2 1 3 1 2 2 0 18 0 1 2 4 2 3 3 0 43 1 2 3 3 1 4 4 0 47 1 2 3 NA 2 5 5

Hi All, I want to take a simple random sample from a large dataset, gly, but I'm getting an error message. Any help? dim(gly) [1] 112371 37 > s1 <- sample(gly,100) Error in `[.data.frame`(x, .Internal(sample(length(x), size, replace, : cannot take a sample larger than the population when 'replace = FALSE' Thanks, Rachel [[alternative HTML version

Hi, I would like to view matrices I am working with in a clean, easy to read, separate window. A friend showed me how to do something like I want with edit(). I can view the matrix in the 'R Data Editor': For a sample matrix: > mat=matrix(1:15,ncol=3) > mat [,1] [,2] [,3] [1,] 1 6 11 [2,] 2 7 12 [3,] 3 8 13 [4,] 4 9 14 [5,] 5 10 15

After a long and winding road (sorry but I'm a novice) I get to a final result which is quite close to what I need; nevertheless I would like to tweak a little further the xyplot so that I can get ***for each single panel defined by variable z*** a finer control over: -the x and y the limits: I would like to be the same for both axes; -the number of thick marks: again I would like to be same

Hello, I am trying to deal with a database table that contains a date in the form of the number of seconds since epoch. Data is inserted in this format by an existing script that I can''t change, so a schema change isn''t realistic. I would like to allow humans to view and edit this data in the form of an actual human-readable date. I figured a facade column would be the

Quick question please....A user logs into windowsXP and tries to create a folder/document and the ownership on the new file/folder defaults to nobody:nobody. I have the user set up in samba on the IRIX machine. All other users have no problem. Anyone have any suggestions? Thanks Rachel

I''m a rails newb and have been Googling about this, but I''m still stumped. Not showing everything here, but basically it should be a pretty common setup so I''m sure others know what I''m doing wrong. - A meter can belong to many meter_groups - A meter_group can have many meters. - A user can ''subscribe'' to viewing a meter_group (Subscription)

Hi All, I'm trying to automate a data summary using summary or describe from the HMisc package. I want to stratify my data set by patient_type. I was hoping to do something like: Describe(myDataFrame ~ patient_type) I can create data subsets and run the describe function one at a time, but there's got to be a better way. Any suggestions? Rachel [[alternative HTML