similar to: R interface to ImageMagick

Hi, R is having the following weird behavior and I am not sure if that is a feature or a bug: I am working on the following "3D" array: > bIm , , 1 [,1] [1,] TRUE [2,] TRUE [3,] TRUE [4,] TRUE [5,] TRUE > class(bIm) [1] "array" > dim(bIm) [1] 5 1 1 When I try to get the first 2D subarray, the whole thing folds into a vector: > bIm[,,1] [1] TRUE TRUE TRUE

Hi, I am having a problem with a very slow indexing and sub-sectioning of a 3d array: > dim(arr) [1] 245 175 150 For each point in the array, I am trying to calculate the mean of the values in its surrounding: mean( arr[ (i - radius):(i + radius), (j - radius):(j + radius), (k - radius):(k + radius)] ) Putting that code in 3

Hi, I can not comprehend the linear fitting results of polynoms. For example, given the following data (representing y = x^2): > x <- 1:3 > y <- c(1, 4, 9) performing a linear fit > f <- lm(y ~ poly(x, 2)) gives weird coefficients: > coefficients(f) (Intercept) poly(x, 2)1 poly(x, 2)2 4.6666667 5.6568542 0.8164966 However the fitted() result makes sense: >

Hi, my client pc hangs on pxelinux before starting to fetch the linux kernel. It hangs after printing the ip information row. No traffic is observed at this point on the network. The pxelinux is transferred to the client through a tftp server and with no problems. What options do I have to proceed from this point and try to find out where the problem is? Thanks, Firas. -- Firas Swidan, PhD

Hi, I am having difficulties in finding ways to analyse scatter plots and quantitatively differentiate between them. Since this is best demonstrated by a figure, I have attached one with 4 subfigures (a)-(d). Qualitatively (and I hope you would agree with me), sub-figures (a), (b), and (d) seem to represent uniform 2d scatters. It is hard for me to quantify it, but it seems as if the envelopes

Hi, I have collected a bunch of old PII PCs that I am trying to PXE boot. There NICs are old and so I use etherboot floppy to emulate a native PXE boot. I have configured tftp, dhcpd, pxelinux, and all the other stuff. Everything works fine till pxelinux start booting. Then it stucks after printing the IP row. --------------- pxelinux output ----------------------- PXELINUX 3.10 2005-08-24

Hi, I am experiencing a long delay when using dataframes inside loops and was wordering if this is a bug or not. Example code: > st <- rep(1,100000) > ed <- rep(2,100000) > for(i in 1:length(st)) st[i] <- ed[i] # works fine > df <- data.frame(start=st,end=ed) > for(i in 1:dim(df)[1]) df[i,1] <- df[i,2] #takes for ever R: R 2.0.0 (2004-10-04) OS: Linux, Fedora Core 2

Hi, I have a small R question: how to print a single "\" character? I have the following results: > print("\") does not work > print("\\") [1] "\\" I need to make the following substitution as well, but it does not work either: > sub("_","\_","g_g") [1] "g_g" Thanks in advance, Firas.

Hi, I am using the following command to print to a file (I omitted the file details): cat( paste( paste(orientation, start, end, names,"\n"), paste(start, end, "exon\n"), sep="")) where "orientation" and "names" are character vectors and "start" and "end" are integer vectors. The problem is that R coerce the integer vectors

Hi, I have two (different types of) measurements, say X and Y, resulting from the same set of experiments. So X and Y are paired: (x_1, y_1), (x_2, y_2), ... I am trying to calculate the standard deviation of Y with respect to X. In other words, in terms of the scatter plot of X and Y, I would like to divide it into bins along the X-axis and for each bin calculate the standard deviation along

Dear I hope you are wery well when read this e-mail.My name is Firas ALSHAWY and I am a Phd student in the high Institute of marine research - tishreen university- Syria I would like to want some help my in my research, I have data ( length - weight - gonad weight - fishing mortality - natural mortality - the number of fish-temperature of water, maximum age ) , I would like to use the package (

Hi all, I am a new R- user and I am going through the R-manuals, but I could not find an answer for my question. I am confused about when to use the GAM package and when to use the MGCV package?? My Model is a GAM model of continuous outcome and many non-linear continuous predictors (using the "s" function) as well as categorical predictors. Thanks in advance for your help and

Hi R users, I'd like to draw a nomogram using a competing-risks regression (crr function in R), rather than a cox regression. However, the nomogram function provided in the Design package is not good for this purpose. Do you have any suggestion. I really appreciate your help Many thanks F.Abdollah, MD San-Raffele hospital Milan, Italy -- View this message in context:

The recently released update to ImageMagick (6.0.7.1-14.x86_64) has a problem on x86_64 -- it's missing /usr/bin/animate, /usr/bin/display, and /usr/bin/import. The previous ImageMagick-6.0.7.1-12.x86_64.rpm is fine... -- Matthew Miller mattdm at mattdm.org <http://mattdm.org/> Boston University Linux ------> <http://linux.bu.edu/>

I accidentally discovered 'convert'. It is a command line utility. Changing a file from png to gif works like this convert aaa.png aaa.gif Amazingly simple, powerful and effective. I've since discovered it has an amazing list of options convert --help a manual file:///usr/share/doc/ImageMagick-6.2.8/www/convert.html and a web site http://www.imagemagick.org/ Does anyone

https://imagetragick.com/ As CentOS is often used for web servers, I thought this should be posted here. Bug in ImageMagick allows remote exploit. AFAIK no patch exists yet but defense against the exploit is detailed at the link. CVE-2016?3714

I recently came across the need to convert jpg images with IM, did a standard install of "yum -y install ImageMagick" and found that images converted with CentOS's base port of IM would actually corrupt the images, yet using the same (albiet different version, different distro) software didn't corrupt the images at all. By corrupted, I mean, the bottom portion of the image under

Hi all, just installed ImageMagick on my Mac, then added the gem rmagick, and not can''t launch the server on my local machine. Anyone experience this or have any ideas? rails s /Library/Ruby/Gems/1.8/gems/rmagick-2.13.1/lib/RMagick2.bundle: This installation of RMagick was configured with ImageMagick 6.6.4 but ImageMagick 6.6.5-0 is in use. (RuntimeError) from

Dear list, (sorry if I post to the wrong place...), Though having spent some time on it, I cannot find an answer by myself to the following behaviour of the read.image function (adimpro package) : I'm running R.2.6.2 on Windows XP. The home directory is C:\Program files\R\R-2.6.2 Version 0.4.4 of adimpro is loaded. ImageMagick 6.3.0 is installed, its directory is C:\Program

I am having issues loading imagemagick and rmagick on webfaction. I have installed a rails app called balder that organizes images. my main problem is that i can''t seem to upoload the image sthrough balder. balder uses imagemagick and rmagick when i use the console and do this: irb(main):003:0> require ''RMagick'' => nil I don''t think rmagick is