similar to: make check failed on linux-amd64 using PGI compilers

Dear R-devel, [I'm not sure if this is appropriate for R-devel. If not, I'm more than happy to move it to R-help.] As those of you who saw my post on R-help know, I've been trying to build R-patched on a dual Opteron box running Scyld Beowulf, using the PGI 6.1 compilers. The build went fine, but I couldn't get it to pass make check-all. Jennifer Lai, who reported success with

Hi All, While attempting to build R-patched using the Portland Group compiler suite on our dual Opteron 250 box running Scyld 29cz5 (based on RH, kernel 2.4.29), I get: make[5]: Leaving directory `/home/andy/Rbuild/R221-pgi/src/library/tools/src' make[5]: Entering directory `/home/andy/Rbuild/R221-pgi/src/library/tools/src' pgcc -I../../../../include -I/include -I/include/CC -fpic

Dear R-helpers, I am having difficulty making R plot only integer labels on the x-axis of a simple graph. I want to plot the median values of a score on each of three occasions. Non-integer occasions are impossible. But, R keeps labelling the x-axis with half-occasions, despite my attempts to stop this using the "xaxs" and "xaxp" parameters of 'plot'. p1=c(1,2,3);

Hello I would like to build R from source and use the PGI compiler, rather than the GCC compiler. I saw the instructions for the Intel compiler in the R Installation Manual, but I didn't see the PGI. I tried a few times without instructions, but without success. Any suggestions would be most welcome. Also, I hope this is the right group for the question. Sincerely, Erin -- Erin

Dear DevelopeRs, I'd like to ask those who develop R packages with compiled code to please try avoiding dependency on GCC (gcc/g77/gfortran/g++) specific features in the code, for the simple reason that there are non-GCC compilers out there that might choke on such features. I found this out back when I was trying to build R-2.3.0-to-be on our dual Opteron based Scyld cluster. Because the

Dear R-devel, I'm trying to compile R-1.9.0beta (2004-03-31) with the PGI compilers (15-day free evaluation: after the 15 days the binaries will stop working). I'm running into some problems, that I hope some can offer pointers. 1. After configure, the FLIBS include /usr/local/lib' --- note the extra '. I had to manually delete it in a couple of places. In a previous thread on

I think this is a bug; at least this behavior is not documented in plot or plot.default. plot.default resets xaxp, and leaves xaxp reset when it exits: par(xaxp=c(0,1,4)) print(par("xaxp")) plot(c(0,1),c(0.2,0.3)) print(par("xaxp")) R. Woodrow Setzer, Jr. Phone: (919) 541-0128 Experimental Toxicology Division

Hi there, I guess this must be a standard issue, but I'm starting to go crazy with it. I simply want a plot with the x axis being logarithmic, having labels 1, 10, 100..., and ten unlabelled ticks between each of them - just as they introduce logarithmic axis at school. I've played around a bit with log="x", xlog=T (where exactly is the difference here?), xaxp, and xaxt

Hello, I'm new to R, and I'm trying to set the number of tickmarks for a plot using xaxp, but R seems to ignore this setting completely. Maybe you've an idea what I'm doing wrong. I'm using R 1.4.1, and here's hat I'm doing: > d[,'seq'] [1] 28913 16323 13922 6237 4257 3881 4100 3781 2694 2064 1769 1550 [13] 1539 480 >

R-Helpers; This seems simple to set graphic parameter, but I tried plot a graph with 10 intervals in x axis with par(xaxp = c(0, 150, 10) but to no avail: par(xaxp =c (0, 150, 10)) plot(age, y18, type="n", ylab="Height (m)", xlab=" age (Yrs)", font = 2) lines(age, y6, lty = 4, lwd = 2) lnes(age, y10, lty = 1, lwd =2) lines(age, y14, lty = 2, lwd =2)

Dear R users, Plotting question from a R beginner... When I try to plot a response through time, for example: >Date<-c("2006-08-17", "2006-08-18", "2006-08-19", "2006-08-20") >response<-c(4,4,8,12) >as.Date(Date) >plot(Date,response) The dates on the graphic appear in spanish. This I guess is the default way of plotting because my

Dear friends. As promised ver 1.01 solved the former problem and now dates plot OK in windows. But. In the following code, "cex.axis"=0.5 works OK but "xaxp"=c(14620,14680,4) has seemingly no effect. The limits for xaxp was found from the default plot and inspecting par(). I need to put the date marks at specific points. Could I suppress them altogether and make a new xaxis

----------------------- transcript -------------------------- $ R --vanilla R : Copyright 2002, The R Development Core Team Version 1.5.0 (2002-04-29) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type `license()' or `licence()' for distribution details. R is a collaborative project with many contributors. Type

Hi, we have installed R-2.8.1 using the current pgi compiler (8.0.2) for AMD64 on a SLES9 system. When I try to install "Matrix" everything is fine until the last step. make[1]: Leaving directory `/tmp/R.INSTALL.TW3399/Matrix/src/AMD' pgCC -L/usr/lib64 -L/usr/X11R6/lib64 -pgf90libs -o Matrix.so CHMfactor.o Csparse.o TMatrix_as.o Tsparse.o init.o Mutils.o chm_common.o

It takes a lot of sweat to generate a composite plot with R ... sigh. I though I was almost done when I met the umpteenth hurdle. I cannot place a nice title on the 2nd plot (raw signal) on the layout. I do not have control on where either the "main" option of "plot" function, or "title", place the text string which keeps dysplaying chopped from above. I also tried

Dear friends. I'm in windows version R1.0.0. The code below produced a very beautiful and efficient graph in R Version 0.99.0 Patched (February 9, 2000) but in the newest, the x-axis is unreadable with dates written unformatted. I tried to set the numbers using par(xaxp) or xaxs but to no avail. Since it was OK just in the last version I guess there might perhaps be something wrong

Hi, Has anyone had any luck in using portland group compiler to build R(-devel) with AMD's pgi compiled ACML library? I've downloaded the packages and set LD_LIBRARY_PATH, and run configuration script as follow: % ./configure --prefix=/usr/local/R.pgcc --with-blas='-lacml' However, it failed to pick up double complex BLAS, checking for sgemm_ in -lacml... yes checking

Dear R-devel, Kurt had alerted me to the problem that the randomForest package that I maintain has been failing checks in R-devel. However, I just can't see why or where it's failing. I'd very much appreciate any pointer. The failure occur when running the example code in varImpPlot.Rd: > varImpPlot(mtcars.rf) Error in par(opar) : invalid value specified for graphical parameter

----- Original Message ----- > From: "Alex Bradbury" <asb at asbradbury.org> > To: "Hal Finkel" <hfinkel at anl.gov> > Cc: "LLVM Dev" <llvm-dev at lists.llvm.org>, "flang-dev" <flang-dev at googlegroups.com>, "Rob Neely" <neely4 at llnl.gov>, > "douglas miles (PGI)" <douglas.miles at

Hi everyone, I have some very good news for everyone interested a production-quality Fortran frontend for LLVM: The U.S. Department of Energy’s National Nuclear Security Administration and its three national labs have reached an agreement with NVIDIA's PGI division to adapt and open-source PGI's Fortran frontend, and associated Fortran runtime library, for contribution to the LLVM