similar to: Interpretation of output from glm

Hi All. I am a new R user. Trying to do scatterplot. Not sure how to resolve this error message A<-subset (ErablesGatineau, station=="A") > B<-subset (ErablesGatineau, station=="B") > > plot(diam ~ biom) > abline(lm(diam ~ biom), col = "red") > > goodcases <- !(is.na(diam) | is.na(biom)) > lines(lowess(diam[goodcases] ~

Hello, I have this command: x.axis <- seq(from=0.5, to=4.5, length.out=13112) How can I which of the x.axis components is the closest to a given value, for example 3.2? Best, Dani -- Daniel Valverde Saub? Grup de Biologia Molecular de Llevats Facultat de Veterin?ria de la Universitat Aut?noma de Barcelona Edifici V, Campus UAB 08193 Cerdanyola del Vall?s- SPAIN Centro de Investigaci?n

I have a table like the following. I want to fit Cm to Vm like this: Cm ~ Cl+Q1*b1*38.67*exp(-b1*(Vm-Vp1)*0.03867)/(1+exp(-b1*(Vm-Vp1)*0.03867))^2+Q2*b2*38.67*exp(-b2*(Vm-Vp2)*0.03867)/(1+exp(-b2*(Vm-Vp2)*0.03867))^2 I use nls, with start=list(Q1=2e-3, b1=1, Vp1=-25, Q2=3e-3, b2=1, Vp2=200). But I always get 'singlular gradient' error like this. But in SigmaPlot I can get the result. How

Hello, I am creating a plot and I would like to know how to put this expression to the y axis ?mol/10^6 cells I've tried some combinations using the expression() function, but none of them worked. Any idea? Best, Dani -- Daniel Valverde Saub? Grup de Biologia Molecular de Llevats Facultat de Veterin?ria de la Universitat Aut?noma de

Hello, I have a vector, lets say x <- 1:50 I would like it to be cut at certain points, being for example 1:5, 6:11, 12:17, ... How can I do it? I have tried the cut() function, but I don not know how to place the cutting points properly. Best regards, Dani -- Daniel Valverde Saub? Grup de Biologia Molecular de Llevats Facultat de Veterin?ria de la Universitat Aut?noma de Barcelona

Hello, I would like to combine different label sizes in the same x-axis, for example 1 2 3 4 5 6 7 8 9 How can I do it? Best, Dani -- Daniel Valverde Saub? Grup de Biologia Molecular de Llevats Facultat de Veterin?ria de la Universitat Aut?noma de Barcelona Edifici V, Campus UAB 08193 Cerdanyola del Vall?s- SPAIN Centro de Investigaci?n Biom?dica en Red en Bioingenier?a, Biomateriales y

Forget my last message, it was a really stupid problem. Sorry about the mess. Best, Dani -------- Missatge original -------- Assumpte: Problems when checking a package Data: Tue, 05 Feb 2008 11:20:28 +0100 De: Dani Valverde <daniel.valverde at uab.cat> A: R Help <r-help at r-project.org> Hello, I am tryining to build a package called NMRTools and when I check it using R CMD

Hello, I have two vectors, one with 13112 points and the other one with 10909. I wonder if there is a way to interpolate the data so the shorter vectors has the same number of points as the longer one. Best, Dani -- Daniel Valverde Saub? Grup de Biologia Molecular de Llevats Facultat de Veterin?ria de la Universitat Aut?noma de Barcelona Edifici V, Campus UAB 08193 Cerdanyola del Vall?s-

Hello, I have carried out an lda analysis using the lda function of MASS package. I have plotted the LD1xLD2 to represent the data. Now I would like to get the centroids for each group of data and plot it on the LD1xLD2 graph. How can I get the centroid value from the lda object? Best, Dani -- Daniel Valverde Saub? Grup de Biologia Molecular de Llevats Facultat de Veterin?ria de la

Hello! I have read somewhere (somehow, I can't seem to find it again, it's been a couple of months) that when analyzing factorial block design, the position where you put the block factor is important, even more when there are missing values. I understand that when using anova.lm, the order is sequential, so that if I want to check for a treatment effect, I should put my blocking factor

Hello, I have the next function call: lme(fixed=Error ~ Temperature * Tumour ,random = ~1|ID, data=error_DB) which returns an lme object. I am interested on carrying out some kind of lsmeans on the data returned, but I cannot find any function to do this in R. I'have seen the effect() function, but it does not work with lme objects. Any idea? Best, Dani -- Daniel Valverde Saub? Grup

Hello, I would like to convert an Rd object to a latex file, so that I can put it in my thesis. How can I do it? I tryed latex(), but it only works for code... Best, Dani -- Daniel Valverde Saub? Grup de Biologia Molecular de Llevats Facultat de Veterin?ria de la Universitat Aut?noma de Barcelona Edifici V, Campus UAB 08193 Cerdanyola del Vall?s- SPAIN Centro de Investigaci?n Biom?dica en

Hello, I would like to place some text that should appear in the same position of the graphic device, preferably outside the plotting area, regardless the x and y axes limits. How can I do this? Best, Dani -- Daniel Valverde Saub? Grup de Biologia Molecular de Llevats Facultat de Veterin?ria de la Universitat Aut?noma de Barcelona Edifici V, Campus UAB 08193 Cerdanyola del Vall?s- SPAIN

Hello, I am trying to perform a glm analysis on a 68x13113 matrix (named data.spect). The first column corresponds to the predictor (data.spect[,1]) and the rest to the response variables (data.spect[,2:13113]). When I try this code glmObject <- glm(data.spect[,2:13113]~data.spect[,1]) I get the following error: Error: (subscript) logical subscript too long Could anyone help me on

All, Looking for some help here. Not finding anything on the net that looks the same as what I'm seeing. Running Solaris 10 Sparc, on a Sunfire 5220, 16Gb of RAM. Samba version 3.4.5 and using ZFS file systems with user quotas. All cifs clients shares to this server freeze after about 10 to 15 minutes of connectivity. Only fix is to restart samba. I'm not getting any errors

Hello, I have a dataframe named myMatrix with the structure Treatment Time Cr mIb ... Being the treatment and time the predictors and Cr, mIb and so on the response variables. When I call Cr.aov <- aov(Cr~Treatment, data=myMatrix) I got this error: Error in storage.mode(y) <- "double" : invalid to change the storage mode of a factor In addition: Warning message: In

Hello, I want to perform an lme on a database with this structure: ID Sequence Temperature Tumour Error 1 5 0 1 8.721872e-08 1 5 0 2 8.695348e-08 1 5 0 3 2.019604e-13 1 5 37 1

Hello, This is a very basic question, but I don'y know the answer. I have these data delta <- c(28.6-8.825,28.6-8.828,28.6-8.836,28.6-8.845,28.6-8.897,28.6-8.944,28.6-9.027,28.6-9.091,28.6-9.263,28.6-9.4,28.6-9.7,28.6-9.981, 28.6-10.287,28.6-10.48,28.6-10.684,28.6-10.875) ph <- c(4.4,4.6,4.8,5,5.2,5.4,5.6,5.8,6,6.2,6.4,6.6,6.8,7,7.2,7.4)

Hello, I have a text file with this structure: # File created = Thursday, August 28, 2008 3:33:02 PM GMT # Data set = 373 2 1 C:\Bruker\TOPSPIN GABRMN # Spectral Region: # LEFT = 4.5 ppm. RIGHT = 0.5 ppm. # # SIZE = 13111 ( = number of points) # # In the following ordering is from the 'left' to the 'right' limits! # Lines beginning with '#' must be considered as

Hello, I am trying to insert a certain number of points into a certain position of a vector with this code: x <- seq(1:10909) x1 <- c(13112-10909) spect1 <- rnorm(13112) interpol <- approx(x,spect1,xout=c(seq(from=1, by=((10909 - 1)/(x1 - 1)), length.out=x1))) pos <- round(interpol$x,0) intensities <- interpol$y spect2 <- insert(spect1,ats=pos,values=intensities)