Displaying 20 results from an estimated 5000 matches similar to: "build R source package in place from CVS?"
2005 Oct 09
3
[ subscripting sometimes loses names (PR#8192)
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R, like recent versions of S-Plus, sometimes - but not always - loses
names when subscripting objects with "[". (Earlier versions of S and
S-Plus had the correct, name-preserving behavior.) This seems bad, it
would be better to remove names only by explicit request, not as an
accidental
2009 Jun 12
1
Rprof loses all system() time
Rprof seems to ignore all time spent inside system() calls. E.g.,
this simple example actually takes about 10 seconds, but Rprof thinks
the total time is only 0.12 seconds:
> Rprof("sleep-system.out") ; system.time(system(command="sleep 10")) ; Rprof(NULL)
user system elapsed
0.000 0.004 10.015
> summaryRprof("sleep-system.out")$by.total
2014 Apr 24
2
palette() can hang and fail due to X11
For many years, when my R process starts up I've been automatically
setting my preferred default plot colors, basically like so:
my.colors <-
c("black" ,"red" ,"gold" ,"sky blue" ,"green" ,"blue" ,"orange"
,"grey" ,"hot pink" ,"brown" ,"sea green" ,"cyan"
2007 Oct 24
2
R trunk (2.7) build fails with -fpic, needs -fPIC (PR#10372)
On Linux x86-64 (Ubuntu 6.06), the latest R sources from the
Subversion trunk fail to build with the following "recompile with
-fPIC" error:
$ ./configure --with-x=yes --prefix=$inst_dir --enable-R-shlib --with-tcltk=/usr/lib/tcl8.4 --with-tcl-config=/usr/lib/tcl8.4/tclConfig.sh
$ make
/usr/bin/ld: ../appl/approx.o: relocation R_X86_64_32 against `a local symbol' can not be
2013 Sep 30
1
how to interpose my own "[" function?
I want to create my own "[" function (for use on vectors, matrices,
arrays, etc.), which calls the stock R "[", does some additional work,
and then finally returns the modified result.
But, how do I properly call the stock R "[" function? It takes a
varying number of positional arguments, and its R-level closure is
just: .Primitive("[") It's
2014 Apr 21
1
read.table() code fails outside of the utils package
One of the great things about R is how readable and re-usable much of
its own implementation is. If an R function doesn't do quite what you
want but is close, it is usually very easy to read its code and start
adapting that as the base for a modified version.
In the 2.x versions of R, that was the case with read.table(). It was
easy to experiment with its source code, as it all worked just
2008 Sep 05
2
typo in cov()? var() fails on NA in R 2.7.2 but not R 2.6.1
I recently started using R 2.7.2, and noticed a surprising change in
the behavior of var() on NA data:
R 2.6.1 (Patched), 2007-11-26, svn.rev 43541, x86_64-unknown-linux-gnu:
> stdev(rep(NA,3), na.rm=F)
[1] NA
> stdev(rep(NA,3), na.rm=T)
[1] NA
> var(rep(NA,3), na.rm=T, use="complete.obs")
[1] NA
R 2.7.2 (Patched), 2008-09-02, svn.rev 46491,
2010 Oct 27
2
must .Call C functions return SEXP?
For using R's .Call interface to C functions, all the examples I've
seen have the C function return type SEXP. Why? What does R actually
do with this return type? What happens if I *don't* return a SEXP?
Reason I ask, is I've written some R code which allocates two long
lists, and then calls a C function with .Call. My C code writes to
those two pre-allocated lists, thus, I
2005 Aug 03
1
tree/graph data structure APIs?
What is the best code available for simple general purpose
manipulation of tree (and/or directed graph) data structures in R?
Looking through CRAN, I see a bunch of packages for stastical
regression trees, but nothing that seems to provide an API for
manipulating tree data structures. What I'm looking for is something
along the lines of an R version of the Tcllib ::struct::tree API
available
2009 Oct 05
1
R's --enable-threads does nothing?; gdb needs -lpthread
In the R-2-9-branch (svn revision 49914, 2009-09-24), R's configure
script has an "--enable-threads" option. But, does it do anything
useful? When I use "--enable-threads=posix", some of the configure
output changes slightly, but it seems to have no effect on the actual
link commands used when building R. Is that a bug, or am I
misunderstanding what it's supposed to
2023 Oct 24
1
as.character.Date() strips names in R 4.3.2 beta, bug?
In previous versions of R, as.character.Date() retained any names on
its input vector. In R 4.3.2 beta, it removes names. Is this change
intentional, or a bug? (For what it's worth, I greatly dislike this
change, and hope it gets changed back.)
$ grep DESCRIPTION /etc/lsb-release
DISTRIB_DESCRIPTION="Ubuntu 20.04.1 LTS"
$ R --vanilla
R version 4.2.1 Patched (2022-07-09 r82577)
2014 Apr 18
1
Why did R 3.0's resolveNativeRoutine remove full-search ability?
In versions of R prior to 3.0, by default .C and .Call would find the
requested C function regardless of which shared library it was located
in. You could use the PACKAGE argument to restrict the search to a
specific library, but doing so was not necessary for it to work.
R 3.0 introduced a significant change to that behavior; from the NEWS
file:
CHANGES IN R 3.0.0:
PERFORMANCE
2006 Nov 30
1
use one custom package with multiple R versions?
I'd like to install several different versions of R from source. I'm
doing this on Ubuntu Linux 6.06 Dapper x86-64, which ships with R
2.2.1, so the versions of R I want to use are (for now) 2.2.1, 2.4.x,
and the development head.
Fetching the sources with Subversion and running configure with
something like "--prefix=/usr/local/R-2.4-branch-20061130" is
straightforward, but
2005 Oct 03
2
access to R parse tree for Lisp-style macros?
R folks, I'm curious about possible support for Lisp-style macros in
R. I'm aware of the "defmacro" support for S-Plus and R discussed
here:
http://www.biostat.wustl.edu/archives/html/s-news/2002-10/msg00064.html
but that's really just a syntactic short-cut to the run-time use of
substitute() and eval(), which you could manually put into a function
yourself if you cared
2011 Sep 14
3
make check reg-tests-1b.R fails with Ubuntu R
Today I built R from source on a 32-bit Ubuntu 10.04.3 LTS box, and
saw that the "make check" tests/reg-tests-1b.R failed. From the
output at the end of my "tests/reg-tests-1b.Rout.fail" file, the
problem is appearing in the "identical(z, x %*% t(y))" test code
below.
I then tried the stock R provided by the Ubuntu r-base-core binary
package, and to my surprise, it
2005 Oct 09
0
all.equal() improvements (PR#8191)
--k1lZvvs/B4yU6o8G
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The attached patch against R 2.2.0 makes the following improvements to
the all.equal() function:
1. Check names! Stock R all.equal() (unlike S-Plus) ignores names
completely on some objects. I consider this wrong - if the names
are different, the object is NOT "the same".
2. When a
2016 Jul 18
1
failed to assign RegisteredNativeSymbol for splitString
I saw a warning from R that I don't fully understand. Here's one way
to reproduce it:
$ /usr/local/pkg/R-3.2-branch-20160718/bin/R --version | head -n 3
R version 3.2.5 Patched (2016-05-05 r70929) -- "Very, Very Secure Dishes"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu/x86_64 (64-bit)
$
2023 Oct 24
1
as.character.Date() strips names in R 4.3.2 beta, bug?
>>>>> Andrew Piskorski
>>>>> on Tue, 24 Oct 2023 00:01:58 -0400 writes:
> In previous versions of R,
Not in R 4.3.0 or 4.3.1 {you are a bit late with updating ..}.
> as.character.Date() retained any names on
> its input vector. In R 4.3.2 beta, it removes names. Is this change
> intentional, or a bug? (For what it's
2006 Jan 11
3
natural sorting
It would be nifty to incorporate this into R or into an R package:
http://sourcefrog.net/projects/natsort/
2014 Apr 21
0
how to get old type.convert() numeric behavior?
Regarding this change:
> CHANGES IN R 3.1.0:
> NEW FEATURES:
> * type.convert() (and hence by default read.table()) returns a
> character vector or factor when representing a numeric input as a
> double would lose accuracy. Similarly for complex inputs.
>
> If a file contains numeric data with unrepresentable numbers of
> decimal