similar to: t.test using RSPerl

Hi, I've just started using RSPerl. Though also tests in directory "/usr/local/lib/R/library/RSPerl/tests/" are passed successfully, I meet the problem with the following codes; use strict; use warnings; use R; use RReferences; my @array1=1..10; my @array2=1..39; &R::initR("--silent"); &R::library("RSPerl"); my $tt=&R::call("t.test",

Hi, The file I am reading is a text file, whose contents are a matrix that has 15 rows and 58 columns. The first row has column names, and the first column has row names, so the format is correct as far as using read.table is concerned. The other values in the table are all float values (numeric). So when I read in the file using data1 <- read.table("HAL001_HAL0015_Signals.txt"), it

I have been using R and Perl. When I read in a text file using the read.table option, and I try to mathematically manipulate the individual elements in the table, I keep getting an "object is not subsettable" error. If I try to use a different method, it works, but takes too much time(basically, I then need to read in values individually into R instead of as a 2D array, so the number of

Hi, I have been using the prcomp function to perform PCA on my example microarray data, (stored in metric text files) which looks like this: 1a 1b 1c 1d 1e 1f ...................................................4r 4s 4t g1 1.2705 1.2766 ...........................................................2.0298 g2 0.1631

Hello, I tried the R-Sig-Mac list with this query, but had no takers. I hope that the following isn't too far off the mark for this list. Many thanks in advance if someone can help me out! Quick summary: I can't get RSPerl working on a PPC G5 with the pre-compiled binary for Mac OS X, but it does work if I compile R from source with the "--enable-R-shlib" flag. If I

Dear list, I have updated to version R-2.10.0. When I try to load the RSPerl library I get the following error: > library(RSPerl) Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared library '/usr/local/lib/R/library/RSPerl/libs/RSPerl.so': /usr/local/lib/R/library/RSPerl/libs/RSPerl.so: undefined symbol: boot_DB_File__Glob Error: package/namespace load failed

Hi, installation of RSPerl works fine without errors. Running RSPerl does not work at all. If I start R, and then enter this command: library(RSPerl) this error appears: ----------------- > library(RSPerl) Error in dyn.load(x, as.logical(local), as.logical(now)) : unable to load shared library "/usr/local/lib/R/library/RSPerl/libs/RSPerl.so":

Hi, I'm trying to install de RSPerl module and i have some problems trying to test it. I've tried to contact with the author but the e-mail address seems not to exist. Hope that anyone in this list could explain me a little about this problem. I have a bash shell and what i do is the following: #PERLLIB=/usr/lib/R/library/RSPerl/share/blib/arch:/usr/lib/R/library/RSPerl/share/blib/lib #

Hello, Has anyone gotten RSPerl ( (http://www.omegahat.org/RSPerl/) to work on Mac OS X? After installing RSPerl, I run the test program (or, even simpler, perl -e 'use R;') and get the following error: dyld: perl Undefined symbols: _RPerl_createRProxy _RPerl_discardRProxy _RPerl_getProxyValue _RPerl_getReferenceName _addPerlConverterRoutine _fromPerl _tryEval _userLevelConversionToPerl

Hi I have R 2.11.1 installed at Fedora 13. when I tried to install RSPerl by command line sudo R CMD INSTALL ~/Download/RSPerl_0.92-1.tar.gz It failed with following errors, could some one offer help? Thanks Yuan Converters.c: In function ?PerlAllocHomogeneousVector?: Converters.c:1003: error: ?elementType? undeclared (first use in this function) Converters.c:1004: error: ?SVt_IV? undeclared

If anyone can help it would be very much apreciated... System RedHat 9 R installed as # ./configure --enable-R-shlib # make # make install and R seems to work fine ... Then I do # R INSTALL --clean --configure-args='--with-in-perl' RSPerl_0.5-7.tar.gz # export R_HOME=/usr/local/lib/R # cd /usr/local/lib/R/library/RSPerl/examples/ # perl -I

Hi, I try to use R within perl. however, I have a bit difficulty to install RSperl. I followd steps from http://www.omegahat.org/RSPerl/. but still can' t make it work. could someone list a fe w clean steps that I can follow to install it? cheers -- .................................... Yuandan Zhang 张元旦 ..................................... [[alternative HTML version deleted]]

I know that I'm a fool for trying to get this working under windows but I'm obliged. Note I have R 2.6.1 and the latest cygwin. I'm running winxp sp2. 1) If I issue: R CMD INSTALL RSPerl_0.92-1.tar.gz, it fails as such ---------- Making package RSPerl ------------ ********************************************** WARNING: this package has a configure script It

Folks, I am having trouble installing RSPerl on a redhat 6.x box, in which i am an ordinary user, the R install is done as a shared library. I get the following message when i do a R INSTALL RSPerl Any help would be greatly appreciated, thanks & regards Krishna ---------------------------------------------------------------------------- Support R in Perl: updating cache ./config.cache

Hello, I am trying to use the "tree" package in R with RSperl. I have generated a regression tree using the "tree" package in R and saved it in a file say "RegTree_2.Rdata" If I use the predict function from R command line, it works fine. However, I want to use it from within perl using RSperl. To do that, here is what I do, my $regTree =

Dear R-helpers, I am running well Perl and R on my Debian Linux, and I tried RSPerl. Installation is ok and all simple functions run well. But I have a problem to call the "lines" function. I would like to draw an histogram with the density curve on. Is is OK in R with the command: >x<-rnorm(1000) >hist(x,prob=T) >lines(density(x)) for example. Now, I have a Perl script

Dear Sir, I am Vijaya, working as a research assistant in one small research organisation named IBAB in India. Here is my problem, after installing RSPerl in linux, I tried to test it by executing test.pl program which is present in RSPerl/script directory but I am getting the following error Can't load '/usr/lib/perl5/site_perl/5.8.8/i386-linux-thread-multi/auto/R/R.so'

Dear Sir, I am Vijaya, working as a research assistant in one small research organisation named IBAB in India. Here is my problem, after installing RSPerl in linux, I tried to test it by executing test.pl program which is present in RSPerl/script directory but I am getting the following error Can't load '/usr/lib/perl5/site_perl/5.8.8/i386-linux-thread-multi/auto/R/R.so'

Hi, Does anybody try to write CGI script using RSPerl package ? I am interested in RWeb but that doesn't really do what I want. In fact I would like the user to load the file to analyze; then a R program will treat the data ,display resulting graphs and save results in text files. I have test the following script by John Barnett without success. #!/usr/lib/R/bin/R.bin --source

Hi, After installing RSPerl module, when I tried to test the module, I am getting the following error. Can't load '/usr/lib/perl5/site_perl/5.8.8/i386-linux-thread-multi/auto/R/R.so' for module R: /usr/lib/perl5/site_perl/5.8.8/i386-linux-thread-multi/auto/R/R.so: undefined symbol: R_ClassSymbol at /usr/lib/perl5/5.8.8/i386-linux-thread-multi/DynaLoader.pm line 230. at rpack.pl