Displaying 20 results from an estimated 500 matches similar to: "Building a R package under Windows XP"
2005 Mar 15
4
How to extract x rows to get x pvalues using t.test
Hi all,
My data
genes
[,1] [,2] [,3] [,4]
[1,] 25 72 23 55
[2,] 34 53 41 33
[3,] 26 43 26 44
[4,] 36 64 64 22
[5,] 47 72 67 34
stu<-t.test(genes[,1:2],genes[,3:4])
> stu$p.value
[1] 0.4198002
i get 1 pvalue for the entire col1:col2 Vs col3:col4. I am trying to get 5 p values for the 5 rows i have.
I am trying to avoid a for loop coz my
2005 May 20
2
comparing a vactor of values in IF statement.
Hi,
my vector V<- c(1,0.5,0.06,0.056,0.01,0.04,0.4,0.9,0.82,0.1)
if( V > 0.5) { V <- 1 - V }
I get a warning saying only the first element will be used in comparing (if V > 0.5).
However, my results tell me vis-versa ,it actually compares every element of the vector V with 0.5 and that is waht i want it to do.
Using a for loop is expensive and time consuming since my actual
2005 Mar 09
4
How to get standard deviation of rows in a matrix
Hi all,
I am trying to find sd of my rows in a matrix and i get column sd inspite of extracting rows.
I tried to do the sqrt(var(x)) but that did'nt work as well,
Here is my data
genes
15 24 63 40
25 42 46 35
23 53 37 45
30 37 50 55
40 51 30 48
x<-sd(genes[1:5,])
y<-sqrt(var(genes[1:5,]))
I get 4 sds for the 4 columns instead of 5 sds for my 5 rows.
Thanks you in advance.
2005 Jan 14
2
Help in Overlaying of 2 Plots on the same Device.
I'm trying to overlay a density plot on a previously plotted histogram. However, i need to use the same axis as of the 1st(histogram) plot to plot the second. My second plot is creating its own axis and causing my plot to extend the entire histogram instead of getting a subplot on a portion of the histogram. I tried 'fig' and 'new' parameters with no luck.
Thanks in advance.
2005 Jan 08
2
Least square minimization (non-linear)
Hi all,
I think the last time i posted this topic i started on the wrong foot. Thnaks alot to everyone who responded.
i'm coding in R(first time) for a paper my colleague is publishing. i plotted a histogram for 6000 values.
I am told to plot experimental vs theoretical vlaues from the histogram and do a non linear least square curve minimization and compute the mean and sd of the new x
2005 Jan 04
1
Non linear Square fit Function
Hi all,
I'm trying to use the nls function to do a nls curve fit. I have a histogram for my data. I need to get athe best curve fit for this. i am plotting experimental vs the theoretical values. my experimental values are got from my dnorm function, mean=mean of my mid values(hist) and sd=sd of my mid values. For the theoretical i'm using mean and sd of all 20000 raw values as the start
2005 Jan 06
1
Help in Customising NLS function to spit out Mean and SD of the new fit!!!
Hi all,
I'm trying to customize the nls function code to spit out the sd and mean of the new fit. All it gives me are the fitted values. THis function seems to work fine for my project otherwise. All i need is the SD and MEAN. Can someone help me to customise. I frankly did not understand the nls code at all.
I have 10 x and 10 y values from a histogram. I need to use nls to do the best fit
2005 Jan 10
1
How to obtain nls parameter estimates
How can I receive parameter estimates for a given curve that has been fit with the NLS function.
The problem is that I have a "n parameter" curve and I want the optimal fit. The NLS procedure gives me final function values and not the individual parameter estimates that were used to define this "best" fit. What function can I use to get these parameters?
Thanks
2005 Feb 12
1
Trimming Parallel Vectors.
Good Day All !
I have a 2-D vector of mode numeric and a parallel 1-D vector of mode numeric.
Here are my values.
2-D vector 1-D vector
80 75 85 80 80
70 80 90 80 80
60 70 80 70 70
85 75 95 85 85
70 60 90 60 70
My 1-D vector is the average across the rows of my 2-D vector.
I process each column of the 2-D vector in a loop.
When I trim my 2-D vector column
2005 Jan 07
1
Help in customising the NLS function to spit out mean and SD of new fit!!
i'm coding in R(first time) for a paper my colleague is publishing.
i plotted a histogram for 6000 values. Taking the mean and sd of the midpoints i did a dnorm and got the densities.
pl<-dnorm(trimmedvals,mean=midsmean,sd=midsSD)
(now in a loop of 5 times)
i plotted these experimental values against theoretical values using
the nls function the following way.
2005 Jun 02
1
how to rectify t.test( ) error
Hi All,
I get the following error when i perform a t.test.
studentt<-apply(tlr, 1, function(x) t.test(x[2:6], x[7:11],var.equal=TRUE)$p.value)
# tlr is a table of 11 columns and 22500 rows. I am not able to post tlr due to its size.
Error in if (stderr < 10 * .Machine$double.eps * max(abs(mx), abs(my))) stop("data are essentially constant") :
missing value where
2005 Jun 10
1
RCMD Warnings on src directory.
Hi Group,
I performed the following commands to build my package in R 2.0 under Windows XP
I got all my tools from Dr. Duncan Mudroch's website.
I did a RCMD build dnal and it built a tar file for me.
I did a RCMD INSTALL dnal and it installed well.
When i do RCMD check dnal i get the following 2 WARNINGS with no Errors.
checking package directories..WARNING
Subdirectory 'src'
2005 Jan 07
0
Help in customising the NLS function to spit out mean and SD ofnew fit!!
Doesn't look like nonparametric fit to me, since nls() is used to fit to a
gaussian density, so the result is a gaussian density (with estimated
parameter).
What I do not understand is why people would do this. This is not the first
time I've seen people doing this, on both R-help and S-news (if my memory is
still any good). If the objective is to fit a Gaussian distribution to the
2020 Mar 16
6
[Bug 3137] New: -f keeps stdin and stderr open
https://bugzilla.mindrot.org/show_bug.cgi?id=3137
Bug ID: 3137
Summary: -f keeps stdin and stderr open
Product: Portable OpenSSH
Version: 8.2p1
Hardware: All
OS: All
Status: NEW
Severity: normal
Priority: P5
Component: ssh
Assignee: unassigned-bugs at mindrot.org
2005 Feb 22
4
Winbind - how to map ADS group to Unix group
I am running 3.0.10-1.4E on RHEL4. The machine is a ADS member server. I
would like to statically map the ADS group "Domain Admins" to the built in
"wheel" group so all members of "Domain Admins" are in the "wheel" group. I
have looked at the username map option, but I don't want a group of users
mapped to a UID (this would defeat what I am trying to
2005 Jan 21
1
SAMBA + OPENLDAP - Getent - Please help :)
I have setup a SAMBA + OPENLDAP server following Samba-3 By Example, but I have run into several problems. All the tests described in the Chapter 6 such as pdbedit -Lv, slapcat, and ldapsearch -x -b give the desired results. But, getent can't read passwd or group information from ldap backend. I have done my best to solve the problem, but it just doesn't work. I have compiled the nss_ldap
2005 Feb 09
2
"My Documents" doesn't sync unless logged off
"My Documents" folder doesn't sync with the server unless users log off from the machine and log back in. Is there a way to sync the "My Documents" folder during the session?
Thank you.
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2011 Mar 30
2
mbox sync: Expunged message reappeared in mailbox
Mar 29 10:57:02 k8ux dovecot: POP3(stf): mbox sync: Expunged message
reappeared in mailbox /var/mail/stf (UID 123 < 60016, seq=2, idx_msgs=0)
Mar 29 10:57:02 k8ux dovecot: pop3-login: Login: user=<stf>, method=...
Mar 29 10:57:03 k8ux dovecot: POP3(stf): mbox sync: UID inserted in the
middle of mailbox /var/mail/stf (60016 > 123, seq=2, idx_msgs=1)
Mar 29 10:57:03 k8ux dovecot:
2013 Jun 07
14
Puppet Windows package not seeing DisplayName in Registry?
Hello,
I''ve got Package resource on my Windows machine that keeps creating itself
even though the package has been properly installed.
I''ve got the name attribute set to the DisplayName found in the Registry
for the package.
Every time the agent polls, I see in the Event Logs:
/Stage[main]/Mssql_rtwo_sptwo/Package[mssql2008r2sp2_exec]/ensure: created
This is
2006 Jun 26
0
[klibc 25/43] ia64 support for klibc
The parts of klibc specific to the ia64 architecture.
Signed-off-by: H. Peter Anvin <hpa at zytor.com>
---
commit 951dc85bd690c6cc5a971815665da947160cbe51
tree 0843c8aa67a3c46a362d12c392c41c25d85ac9cd
parent bd0599e5290ca1a16bb7a68f7c362d395c612eb3
author H. Peter Anvin <hpa at zytor.com> Sun, 25 Jun 2006 16:58:24 -0700
committer H. Peter Anvin <hpa at zytor.com> Sun, 25 Jun