similar to: R from Perl -- RSPerl and lines function.

Hi,. I've installed RSPerl on my Linux box. It runs all of the test scripts that I've been able to find. I've learned that I can pass in vectors of data as array-refs, and can use named parameters with R::callWithNames and a hash of names and values. The one problem that I'm left with is how to call a function from an add-on package ('ctest' in this case). I know that

Hi, Prof Duncan I am sorry to report to a wrong place. But I am lucky to meet you by chance, right? Thanks first ^^ 1. The variable y1 is an array get from Perl, each element is from a database (the type should be numeric). Here is the code for that. $query = qq{ select exonCount, count(hsEnsGene) as geneCount from countTop1000ks group by exonCount order by exonCount;

Hi, Prof Duncan I am sorry to report to a wrong place. But I am lucky to meet you by chance, right? Thanks first ^^ 1. The variable y1 is an array get from Perl, each element is from a database (the type should be numeric). Here is the code for that. $query = qq{ select exonCount, count(hsEnsGene) as geneCount from countTop1000ks group by exonCount order by exonCount;

Hi, I've just started using RSPerl. Though also tests in directory "/usr/local/lib/R/library/RSPerl/tests/" are passed successfully, I meet the problem with the following codes; use strict; use warnings; use R; use RReferences; my @array1=1..10; my @array2=1..39; &R::initR("--silent"); &R::library("RSPerl"); my $tt=&R::call("t.test",

Hi, installation of RSPerl works fine without errors. Running RSPerl does not work at all. If I start R, and then enter this command: library(RSPerl) this error appears: ----------------- > library(RSPerl) Error in dyn.load(x, as.logical(local), as.logical(now)) : unable to load shared library "/usr/local/lib/R/library/RSPerl/libs/RSPerl.so":

Hello, I am trying to use the "tree" package in R with RSperl. I have generated a regression tree using the "tree" package in R and saved it in a file say "RegTree_2.Rdata" If I use the predict function from R command line, it works fine. However, I want to use it from within perl using RSperl. To do that, here is what I do, my $regTree =

Hi: I'm using RSPerl_0.6-3 calling R from Perl under UNIX system. My perl programs with the RSPerl work well in my computer. If submitting these programs to a UNIX system by 'ssh' or to GNQS system by 'qsub', these programs do not work even though both systems can run R. Details are following. Any suggestion will be highly appreciated. Xiao My perl program 'tt.pl'

Dear list, I have updated to version R-2.10.0. When I try to load the RSPerl library I get the following error: > library(RSPerl) Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared library '/usr/local/lib/R/library/RSPerl/libs/RSPerl.so': /usr/local/lib/R/library/RSPerl/libs/RSPerl.so: undefined symbol: boot_DB_File__Glob Error: package/namespace load failed

Hi, I'm trying to install de RSPerl module and i have some problems trying to test it. I've tried to contact with the author but the e-mail address seems not to exist. Hope that anyone in this list could explain me a little about this problem. I have a bash shell and what i do is the following: #PERLLIB=/usr/lib/R/library/RSPerl/share/blib/arch:/usr/lib/R/library/RSPerl/share/blib/lib #

Hi, I've just started using R and RSPerl. I have some code as follows: &R::initR("--no-save"); &R::call("t.test", (\@array1, \@array2)); where @array1 and @array2 are both 1-dimensional arrays in Perl having 54675 elements each. On execution the output is as follows: Calling R function name `t.test', # arguments: 3 1) Arg type 3 Got a reference to a

Hi, I am having problems installing RSPerl 0.92-1 in my Mac OSX 10.5.1. I?ve installed correctly R-2.6.1 with the .mpkg. I run the next command: <R CMD INSTALL --configure-args=' --with-in- perl ' RSPerl> And the next error message appears: RSPerl * Installing to library '/Library/Frameworks/R.framework/Resources/ library' * Installing *source* package

Hello, Has anyone gotten RSPerl ( (http://www.omegahat.org/RSPerl/) to work on Mac OS X? After installing RSPerl, I run the test program (or, even simpler, perl -e 'use R;') and get the following error: dyld: perl Undefined symbols: _RPerl_createRProxy _RPerl_discardRProxy _RPerl_getProxyValue _RPerl_getReferenceName _addPerlConverterRoutine _fromPerl _tryEval _userLevelConversionToPerl

If anyone can help it would be very much apreciated... System RedHat 9 R installed as # ./configure --enable-R-shlib # make # make install and R seems to work fine ... Then I do # R INSTALL --clean --configure-args='--with-in-perl' RSPerl_0.5-7.tar.gz # export R_HOME=/usr/local/lib/R # cd /usr/local/lib/R/library/RSPerl/examples/ # perl -I

Hi, I am somewhat new to R and RSPerl, but I think this particular problem has to do with RSPerl and so I am not sure if this is the right forum to ask for help. Nevertheless I am quite sure that many of you would have used RSPerl with R. My hardware platform is a Sun/Solaris V440 server running Solaris 9 operating system I use the gcc-3.4.0 compiler to compile R without any problems. My

Hi I have R 2.11.1 installed at Fedora 13. when I tried to install RSPerl by command line sudo R CMD INSTALL ~/Download/RSPerl_0.92-1.tar.gz It failed with following errors, could some one offer help? Thanks Yuan Converters.c: In function ?PerlAllocHomogeneousVector?: Converters.c:1003: error: ?elementType? undeclared (first use in this function) Converters.c:1004: error: ?SVt_IV? undeclared

Hi list, For my research, I started using R as a statistics engine, driven by perl scripts that manage my data and computational jobs. I recently upgraded my cluster to Suse 9.2, and obviously wanted to upgrade R to it's latest version, 2.1.1. Installation of R-2.1.1 went flawlessly thanks to the rpm's created by Detlef Steuer (see cran, thanks Detlef). To interface perl and R, two

Hi, I try to use R within perl. however, I have a bit difficulty to install RSperl. I followd steps from http://www.omegahat.org/RSPerl/. but still can' t make it work. could someone list a fe w clean steps that I can follow to install it? cheers -- .................................... Yuandan Zhang 张元旦 ..................................... [[alternative HTML version deleted]]

Hi all, I'm trying to use the RSPerl module in a script that uses threads. I am able to call R functions without a problem when I don't use threads. However, using threads, I get varying errors depending on how I call the R functions. If I call the R::initR function in the "boss" thread and then try to call R functions from a "worker" thread, I get the following

Hi, I'm wanting to call R from Perl via the RSPerl package. However I cannot seem to install it on my Macbook (OS X Tiger - R 2.6 - Perl 5.8.6). I try to install the source downloaded from the sigmahat website - but it seems to fail - when I search my system for R.pm - I can't find it? Something looks to be going wrong with the make bits? Cheers David M ---- $ R CMD INSTALL

Greetings! Being a Perl hacker for some time, and wanting to leverage what R provides, I've been trying to work with Statistics::R and RSPerl. The former has a race condition that breeds some unreliability and the latter seems to have issues all around, and neither has been updated in some time. Are these projects are abandoned, or is there some effort currently being undertaken to