similar to: R for HTS data analysis

Dear colleague, Just an e-mail to know if they are people working in the field of chemoinformatic that are using R in their work. If yes I was wondering if we couldn't exchange tips and tricks about the use of R in this area ? Best regards Fred Ooms [[alternative HTML version deleted]]

dear all, i need some help in structuring my data file for a hierarchical time series analysis. can someone help please ? i have a 600 row database in the nature of a panel data, with 3 time series values of interest. the data also has 4 classificatory variables comprising a code for each entity in the panel, a value for time (year), and classification of type of entity and a further sub-group

Have a look at http://stackoverflow.com/questions/5963269/how-to-make-a-great-r-reproducible-example and http://adv-r.had.co.nz/Reproducibility.html On Wednesday, January 10, 2018, 11:51:22 AM EST, deva d <devazresearch at gmail.com> wrote: dear all, i need some help in structuring my data file for a hierarchical time series analysis. can someone help please ? i have a 600

Hello, Have a look at the plm package https://cran.r-project.org/web/packages/plm/index.html It has a convenient way to structure your data into panel according to some id. Best regards, Jeremie On Wed, Jan 10, 2018 at 5:41 PM, deva d <devazresearch at gmail.com> wrote: > dear all, > > i need some help in structuring my data file for a hierarchical time series > analysis.

Hi all. How do I extract date from fcs format file with R. I.e I'd like make statistical analysis using R-program, but I don't know if there are R-packets for fcs format file, and using examples. Thanks. Pta: In Linux SO exist any program that transform from fcs format to ASCII text file?

Hello, It's difficult to help without a sample of the format. Can you provide a short sample like 10 lines and a few columns.? Best regards, Jeremie On Wed, Jan 10, 2018 at 6:12 PM, John Kane via R-help <r-help at r-project.org> wrote: > Have a look at http://stackoverflow.com/questions/5963269/how-to-make- > a-great-r-reproducible-example > and >

You are the one with data. Supply what you have (or a simulated version of same, hence the reading recommendation) using dput, and someone may suggest how to transform it. In most cases a simple tabular format (data frame) is sufficient. -- Sent from my phone. Please excuse my brevity. On January 10, 2018 12:20:47 PM PST, "J?r?mie Juste" <jeremiejuste at gmail.com> wrote:

Hi, I'm having some trouble trying to run tinc over GNU httptunnel. On server A I have: /etc/tinc/netname/tinc-up: #!/bin/sh ifconfig $INTERFACE 10.3.0.1 netmask 255.255.0.0 /usr/bin/hts -F localhost:655 8888 /etc/tinc/netname/hosts/A: Address = foo.com Subnet = 10.3.0.0/24 TCPonly = yes /etc/tinc/netname/hosts/B: ConnectTo = A Subnet = 10.4.0.0/24 TCPonly = yes

thanks jeff and jeremie, i am attaching 40 rows of the data, randomly picked from the large table. the vars are - entity (1-46, with some missing IDs not included due to missing data), group (1/2), sub group (1/2/3/4), year (2002-2016), y, x1 and x2 - large values included due to size of players - (may not be considered as outliers as they constitute the sample and are important countrywide

Hello people, I am in the process of migrating from Stata to R and I would like to check if my results are similar under the two softwares: Here is my GLM command under R nurse.model<-glm(pQSfteHT~dQSvacrateHTQuali3_2 + dQSvacrateHTQuali3_3 + dQSvacrateHTQuali3_4 + dQSvacrateHTQuali3_5 + cluster_32 + cluster_33 + cluster_34 ,family=binomial(link = "logit")) and below the stata

Dovecot 2.2.31 with mailboxes in mdbox format. Since a couple of days some mailboxes have the problem, that sieve rules moving mails to folders stop working and .sieve.log in mailbox shows: sieve: info: started log at Sep 07 13:57:17. error: msgid=<20170907155704.EGroupware.S4yThVJRr12WSiJLpKbK0Bz at somedomain.egroupware.de>: failed to store into mailbox 'INBOX/Munser': Mailbox

It's not in R, but the system described in the pair of papers our group published in the Journal of Biomolecular Screening late last year: http://jbx.sagepub.com/cgi/content/refs/8/6/624 http://jbx.sagepub.com/cgi/content/refs/8/6/634 is based on S-PLUS and StatServer. It was also presented at the Insightful Tech. Conf. back in 2000. For Excel/R connection, look for the R-(D)COM server on

This is my first post requesting help to this mailing list. I am new to R. My apologies for any breach in posting etiquette. I am new to this language and just learning my way around. I am attempting to run some sample code and and am confused by the error message: Loading required package: rrcov Error in fitNorm2(fdat[, "FSC-H"], fdat[, "SSC-H"], scalefac = ScaleFactor) :

Hi, I'm have some data on a grid (specifically high throughput assay plates) and am interested in evaluating measures of spatial autocorrelation to flag plates for corrections. I have been using moran.test and geary.test from the spdep package. My approach is as follows: ## plate is a matrix of data coords <- expand.grid(1:32, 1:48) x <- as.numeric(plate) moran.test(x,

Hi! I'm apologize for my poor English, but have a question. This question is a shorter than one i posted not so long ago (https://lists.samba.org/archive/samba/2013-September/175649.html) and received no answer for a while. In this question i took a log from the different server, but this is no matter: the problem persists on all of my servers. So, my OS is FreeBSD 9.0, my Samba is 3.6.18

Greetings! I have a samba 3.6.18 acts as a domain member. I'm using a samba nss and creating local groups for a domain users. Here part of my nsswitch.conf: group: files winbind passwd: files winbind The problem is that the tdb unix GID mappings returns different ID from time to time for the same SIDs. Suppose we have a local group "samba_svn1", created with "NET SAM

Greetings from Switzerland! Are there any plans/initiatives/considerations in future versions of R for commenting out regions via something like " /* */ "? (I've got an application for which something like that would be useful; if not, there are less simple solutions). best, -tony "Commit early,commit often, and commit in a repository from which we can easily roll-back

Samba is trying to be a member server in an AD in native mode, using winbind, nss, and kerberose. There are 3 kdc's (2 are Win2003, 1 is Win2000), samba server is RH-AS3 + Samba version 3.0.9 (from samba.org) + krb5 1.3.1-6 (from Fedora Core). I thought I had things working (join succeeded, could access shares, modify files), and then it stopped working. After clearing out the host account

Hello, I am Ruijie Fang, a GSoC student working on "Improve hot cold splitting to aggressively outline small blocks." Over the course of last week, I met with my mentor and co-mentor, Aditya Kumar, and Rodrigo Rocha, and we made a preliminary plan on improving the existing hot/cold splitting pass in LLVM through identifying patterns of cold blocks in real-world workloads via block

Hi Teresa, Thank you for your reply! I discussed this with Aditya and Rodrigo today about this. We will always have PGO turned on for our benchmark, (i.e. we assume the profiling information is always available). In terms of the workload we supply to PGO: For postgresql, I suggested we use the "pgbench" benchmark, a TPC-B-based SQL benchmark for postgres, to supply profiling information