similar to: Plot Moran's I

Hello all, I'm a new user on R, and I used the abline function to draw a line on my graph but it doesn't work with xyplot(). With the plot function, abline() is ok but with plot it doesn't make what I want. Maybe it's a little thing to change in plot() but I don't find what! With xyplot I write this : Xyplot(m~ordered(l,levels=1),

Dear R users, I'm trying to fit a parametric survival model using the survreg function with a Weibull distribution. I'm studying the time to death of individuals from different families and I would like to fit different shape parameters (ie 1/scale in R) for each of the families. I looked it up in the help pdf and on the internet, but I couldn't find anything. Would it be possible to

Hi all, I am a very recent user of R. Mine is probably a basic question. I would like to know how do we create a certain set of points with geographic coordinates, between two endpoints. Please explain me how to do this using R. Which are the packages to be used for doing this. Thanks in advance, Ravichandra Mondreti. Ravichandra Mondreti PhD student/ Doctorant Spatial

Dear R users, I'd like to fit different longevities for males and females (µm vs µf below) with a Weibull interval-censored survival model. Unfortunately more than 50% of the individuals in the experiment died before their sex could be assigned. Hence I was wondering about fitting the proportion of females in the model ( "prop" below) with a likelihood function such as:

Hi, I am trying to calculate Moran's I test for the residuals for a regression equation, but I have trouble converting my coordinates into nb format. I have used the dnearneigh() funtion now with an arbitrarily high upper distance to make it include all plots. However, when I do the lm.morantest() I get a Moran's I value which is the same as the expected value and a P-value of 1. I

Dear R-users, I was wondering if someone could give me some advices on the following problem. I tried to apply moran’s test to a small dataset and couldn’t succeed, here is the error message:   mor <- moran.test(x, res2)   Avis dans moran.test(x, res2) :   Out-of-range p-value: reconsider test arguments   mor     Moran's I test under randomization data:  x  weights: res2 

Dear , This is Elaine. I am computing moran's I using moran.test for a generalized linear model (multiregression). The following contents are the results, and I cannot find the observed Moran's I mentioned as estimate in the manual. Please kindly help indicate if there is observed Moran's I did not notice or other method for calculation. Thanks Elaine data: residuals(modg1)

Dear all, I have a question regarding the spdep package: Assume that each person within my dataset is characterized by a continuous variable y. In order to test for spatial autocorrelation in y I calculated a Moran's I statistic. The problem is that y is also likely to be influenced by a series of other variables x that are unique to each person in my dataset. To test to which extent the

Hello- I am using the vegan package PCMN() because I need to use option of row weights (I am using CCA following the selection of the significant/positive PCNM variables). In the library PCNM (PCNM function), the Moran's I is calculated for you as part of the function. I see that I need to calculate Moran's I separately in order to retain the eigenfunctions with positive spatial

Hi, I am trying to do a Moran's I test on an ordinal logistic regression model. I have a simple spatial weights matrix listed below I would like to use. Y= 1 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 1 0 1 1 0 0 0 0 1 1 0 0 0 1 1 1 1 0 0 0 0 0 1 1 1 1 0 0 0 0 0 1 1 1 1 0 0 0 0 0 1 1 1 1 0 0 0 1 1 0 0 0 0 1 1 0 0 1 0 0 0 0 1 1 I try to run the test as follows- moran.test(order$resid,

Hi, I am looking for some code for Moran's I. Has anyone previously done this? I have been unable to find it in the search engines. James

i would like to perform moran's analysis with r... thanks duccio

Dear all, I would like to calculate a Moran's I statistic using the moran function in the spdep package. The problem I'm having deals with how to create the listw object. My data stems from the area of social network analysis. I have list of poeple and for each pair of them I have a measure of their relationship strength. So my dataset looks like: Jim; Bob; 0.5 This measure of

hi,friends, we all know that moran's I index and Geary'C index can be used to test spatial autocorrelation in both the area data and point data, but i only can find something on how to calculate on the data of area, and can't find the methods to perform it on the point data, could anybody give me some information, thanks in advance! -- Kind Regards, Zhi Jie,Zhang ,PHD Department of

how to calculate moran's i having a matrix of species vs. plots? cheers duccio

Dear list: I've tried professor Roger Bivand's spdep package for a while, and found it is quite useful. However, when considering the significance test of the local moran's index under the assumption of both normality and randomization, I just can't get a clue from the package's calculating results. I also read professor Luc Anselin's 1995 LISA paper (geographical

Sorry for the repetition, unless I've got bad deja vu this questions been asked before but I couldn't turn up an answer on CRAN. Is there already any code in existence for local dependence measures such as Moran's I or Getis and Ord G? Also, S-Plus has a number of interstingly named Cluster Algorithms based on some previous stand-alone fortran algorithms (agnes, daisy etc.) which

I want to do "moran's I test" in R language. I try to use "gearymoran" in Package "ade4","moran" in Package "spdep", and Moran.I in Package "ape". But I do not know how to do it because data format is different. My data: x y dbh 111.03 10.7 7 118.11 0.28 1.2 165.36 0.36 8.4

Hello, I'm writing some genetic simulations in R where I would like to place genes along a chromosome proportional to the density of markers in a given region. For example, a chromosome can be presented as a list of marker locations: Chr1<-c(0, 6.5, 17.5, 26.2, 30.5, 36.4, 44.8, 45.7, 47.8, 48.7, 49.2, 50.9, 52.9, 54.5, 56.5, 58.9, 61.2, 64.1) Where the numbers refer to the locations of

The attachment is my dataset: 1.ccc.shp (the original data) 2.ccc.gwt, which is computed by Geoda; Introduction to the variables in my data: ID: key variable; N_LATITUDE: latitude measured by GPS; E_LONGITUD: longitude measured by GPS; LIVES: attribute data I get the different result of Moran's between ARCGIS and Geoda, R, why? ARCGIS:spatial statistics tools:spatial