similar to: label outliers in boxplot and/or bwplot

RenE J.V. Bertin wrote: > Hello, and (somewhat belated) best wishes for 2005. > > Can one order not to draw outliers in bwplot, or at least exclude them from the vertical axis scaling? If so, how (or what doc do I need to consult)? > The options that have this effect in boxplot() do not appear to have any effect with bwplot (although outline=FALSE in boxplot does *not* change the

Hi. My data contains information for 10 hospitals for 12 different measures. Let's call it x1-x12. I need to create a boxplot for each one of this measures and put them into one page. Each plot also needs to be independent, i.e. cannot use the group feature because of different scales for each measure. I was successful using the following code: x1 <- c(1.317604376, 0.978038233,

Hi List, Just wondering where the documentation exists for the statistics which makeup the bwplot. I'm guessing that if R is like similar products that the graph is constructed as The median is the filled circle. The box surrounding the filled circle depicts the 25th and 75th quartile. The range of values is given by the dotted lines (?whiskers?) outside of each box, and possible

Hi All- I have 24 boxplots on one graph. I do not have the whiskers extending to the outliers, but I would like to label the maximum value of each outlier above the whiskers. I have the stats but am having trouble figuring out how to label the whiskers. Any suggestions would be great! sherri

Given my reproducible example test<-structure(list(site = structure(c(1L, 1L, 1L, 1L, 1L, 1L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 3L, 3L, 3L, 3L, 3L, 3L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 5L), .Label = c("A", "B", "C", "D", "E"), class =

Sorry if this is a stupid question, I'm a beginner and I didn't find help in manuals, archives, or web I have a z matrix of this type: a b c d 786-30.s2.gpr 0.2186214 1.3374486 89.37757 9.066358786-31.s1.gpr 1.0931070 1.3245885 81.37860 16.203704786-31.s2.gpr 0.5529835 1.3374486 86.43261 11.676955786-32.s1.gpr 0.6815844

Hello This is Elaine. I am using package lattice to generate boxplots. Using Richard's code, the display was almost perfect except the outlier shape. Based on the following code, the outliers are vertical lines. However, I want the outliers to be empty circles. Please kindly help how to modify the code to change the outlier shapes. Thank you. code package (lattice) dataN <-

Hi, I was just trying to figure out how to beautify the output of my bwplot-output. Altogether I figured most of the things out on my own. The one thing which puzzles me though are the symbols for the outliers. I can easily change the form of the median symbol by using "pch" but I don't know how to do this for outliers. Obviously the "outpch" of the

Hello to all users and wizards. I am regulary using 'boxplot' function or its analogue - 'bwplot' from the 'lattice' library. But they are, as far as I understand, totally flawed in functionality: they miss ability to select what they would draw 'in the middle' - median, mean. What the box means - standard error, 90% or something else. What the whiskers mean -

Hello I am using lattice bwplot to draw migration distance of three groups of birds. The boxplots from the left to right is displayed in alphabetic order of the boxplot names, as the default setting. However, I would like the boxplots from the left to right to be displayed according to the migration distance from the short values to the long ones. In the data below, from the left to the

Dear List, I know this has been covered before, but I don't seem to be able to get it right. I am constructing a boxplot in lattice and can't get the scales in the correct alphebetical order. I have already read that this is due to the way factors are treated, and I have to redefine the levels of the factors. However, I have failed. As a simple example: library(lattice)

Hi, I was using Gviz package to create a boxplot. I understand that Gviz uses "panel.bwplot" to create the boxplot. Is there any way that I can remove the dashed line surrounding each pair of boxplots? Here is some sample code: ############# library(Gviz) thisdata <- matrix(sample(1:100,60),nrow=10,ncol=6) positions <- sample(1:100,6) limit1 <- min(positions)-1 limit2

Hello all, I wrote a small function to add labels for outliers in a boxplot. This function will only work on a simple boxplot/formula command (e.g: something like boxplot(y~x)). Code + example follows in this e-mail. I'd be happy for any suggestions on how to improve this code, for example: - Handle boxplot.matrix (which shouldn't be too hard to do) - Handle cases of complex

Dear all, I would like to have the same color for the all boxplots from the same panel, but my code below shows the two colors alternating. Thanks! set.seed(42) D1 <- rnorm(200) D2 <- factor(sample(letters[1:2],200,TRUE)) D3 <- factor(sample(letters[3:5],200,TRUE)) DF <- data.frame(x=D1,a=D2,b=D3) print(bwplot(b~x|a,data=DF,col=c("black","black"),

Dear R-users, Following is part of my data, where slide has 36 levels and block 48 levels. I have done boxplot for each slide on the same graph. There are outliers for each slide and I tried to use indentify functtion to identify outliers in such a way that when I click on an outlier or point, the points will be labelled by either their block or ID or by both but without success. How can I make

I really like the ease of use with the boxplot command in R. I would rather have a boxplot that shows the average value and the standard deviation then the median value and the quartiles. Is there a way to do this? Chad Junkermeier, Graduate Student Dept. of Physics West Virginia University PO Box 6315 210 Hodges Hall Morgantown WV 26506-6315 phone: (304) 293-3442 ext. 1430 fax: (304)

dear all, could somebody tell me how I can plot mild outliers as a circle(?) and extreme outliers as an asterisk(*) in a box-whisker plot? Thanks very much in advance -- View this message in context: http://www.nabble.com/mild-and-extreme-outliers-in-boxplot-tp25040545p25040545.html Sent from the R help mailing list archive at Nabble.com.

Hi, Is there some alternative to the 'groups' argument in lattice's bwplot function for boxplots? Say in the example below: bwplot(yield ~ site | year, data = barley) you want to have two side by side boxplots per site, corresponding to each year in the barley data frame. Ideally, the space between boxplots of the same site should be smaller than that between boxplots of different

Hi, can I find something comparable to boxplots$stats in the resulting trellis object of a bwplot() call? All I could find was a list named panel.args, which apears to be identical to the list I get calling xyplot(). This isn't helping very much since I would still have to compute the median/quantiles myself to use it for further statistical evaluation (such hierarchical clustering). All kind

Dear r-helpers, tst <- data.frame(as.numeric(x <- 1:20), f <- rep(c('hi','lo'), times = 10)) with(tst, bwplot(f ~ x, panel = function(x, y){panel.bwplot(x, y, pch = '|', stats = boxplot.stats, fill = 8, varwidth = T)})) I can't figure out from the documentation how to tell stats that I would like to see notches or (even bands). Here is what I've