similar to: Rd problems when converting DVI version

OK, dumb question, and it is probably in the docs somewhere, but after 12 months working with R and quite a while looking at the docs, I still don't know (or have forgotten) how to replace all NA values in a matrix at once with some other value. I can do it column by column using is.na(), but I can't figure out how to do it for the whole matrix. My apologies, I am ashamed ;-) Michael

Hi First a simple question to do with plot(). How do I change the x-axis labels on a plot? For example, I am plotting each row of a matrix, and I want each row to be a line on my graph. Simple really. Eg: plot(sg[1,], type="l") When I do this, the x-axis is labelled 1:38, as I have 38 columns in my matrix. When I do: plot(sg[1,order(sg[1,])], type="l") Ideally I would

Hi I'm seeing some "odd" behaviour with cbind(). My code is: > cat <- read.table("cogs_category.txt", sep="\t", header=TRUE, quote=NULL, colClasses="character") > colnames(cat) [1] "Code" "Description" > is.factor(cat$Code) [1] FALSE > is.factor(cat$Description) [1] FALSE > is.factor(rainbow(nrow(cat))) [1]

Hi I have recently installed and implemented Xvfb (X virtual frame buffer) so that I can create jpegs using R over CGI (SUSE Linux 8.1 and Apache 1.3). I have noticed that in order to do this, a file (Rplots.ps) is created in my cgi-bin directory everytime a cgi script is run. This could cause problems though as I have a multi-user system where it is possible that two different users will run

Hi When I use plot(hclust(dist..)...)...) etc to create a dendrogram of a hierarchial cluster analysis, I end up with a vertical tree. What do I need to do to get a horizontal tree? Also, my users are used to seeing trees who's leaves all "end" at the same place (eg. Like in minitab). Is this possible in R? Thanks Mick Michael Watson Head of Informatics Institute for Animal

Hi I have seen a few posts to this list regarding problems accessing the x11() device over cgi - namely, when trying to create a graphic using the jpeg() function, everything is fine from the command line but it won't work over cgi, producing the error: "Unable to open connection to X11 display" Has anyone actually solved this particular problem satisfactorily? Please reply

Hi I am running an R script that creates 100s of graphs, and I need to use the greek CAPITAL letter delta in the mtext() function. I got as far as expression(delta) but this gives me the lowercase version. Can anyone help? I'm using R 2.7 on Windows XP Mick Head of Informatics Institute for Animal Health Compton Berks RG20 7NN 01635 578411

Hi I am applying the wilcoxon paired signed rank test to many sub-groups of a data frame using by() and wilcox.test, and sometimes the test uses continuity correction and sometimes it doesn't. What I want to know is: 1) what is continuity correction? The docs say: correct: a logical indicating whether to apply continuity correction in the normal approximation for the p-value.

Following on from my previous mail! plot(1:10,1:10) mtext("title", side=3, adj=0, font=3, cex=1.5) This works as expected and puts the font in italics. tag <- "A)" suffix <- "genea::" plot(1:10,1:10) mtext(bquote(.(tag) ~ Delta * .(suffix)), side=3, adj=0, font=3, cex=1.5) Here, the font isn't in italics, it's normal. I presume this is some

Replacing the NA?s with eg. 1 : > a 1 2 3 4 1 20 50 10 80 2 NA 19 NA 49 3 NA 32 NA 61 4 45 101 44 190 a[try(is.na(a)) == TRUE] <- 1 > a 1 2 3 4 1 20 50 10 80 2 1 19 1 49 3 1 32 1 61 4 45 101 44 190 I this can help you, Matthias > -----Urspr?ngliche Nachricht----- > Von: r-help-bounces at stat.math.ethz.ch > [mailto:r-help-bounces at

Hi You may remember a while ago I was having problems with creating jpegs using R over CGI. I solved this on my LAPTOP (*grins*) by - executing "xhost +localhost" from the command line - putting "SetEnv DISPLAY=:0.0" in my httpd.conf (apache) And all worked well. Now I'm trying to move the whole system onto my shiny new server - and encountering yet more problems

https://bugs.freedesktop.org/show_bug.cgi?id=108651 Bug ID: 108651 Summary: Screen flickering when using compositor with OpenGL backend Product: Mesa Version: unspecified Hardware: All OS: Linux (All) Status: NEW Severity: normal Priority: medium Component:

Yesterday I cloned one of my VMs and, somewhat implausibly, it took virt-clone something like 8-9 hours to clone the 8Gb disk image... Copying it from the command line took a mere 6.5 minutes. I assume this is a bug, and it's not expected to take this long ;-) This was using virt-clone from python-virtinst-0.500.2-1.fc12.noarch in the virt-preview repository. Tom -- Tom Hughes (tom at

On Wed, 2013-08-21 at 23:59 -0700, Dmitri Gribenko wrote: > On Wed, Aug 21, 2013 at 11:04 PM, Steven Newbury <steve at snewbury.org.uk> wrote: > > I've been trying > > to get x32 ABI support working in Clang and compiler-rt, I based off the > > previous clang patch, bringing it up to date with the changes in trunk, > > and hacked together handling of x32

is anybody else having problems with the new java 1.6.0.22 ? i am tried both cortado-ovt-debug and cortado-ovtk-debug - neither seem to work anymore once i installed the new java. once i go back to the old java 21 everything works fine. my jar file downloads for console messages (below) came from: http://downloads.xiph.org/releases/cortado/cortado-ovtk-debug-0.6.0.jar i have included

On Thu, 2013-08-22 at 15:22 +0100, Steven Newbury wrote: > This patch is still not creating elf32_x86_64 objects. No idea > why. :( It does however, fix elf_x86_64 (-m64) code generation on x32 > hosts which is nice. :) I know why. I had assumed Michael Liao (the original patch author) had submitted all the _LLVM_ x32 support as separate patches, and it was just the

Hi, Our desktop clients are running CentOS 7 with the Xfce desktop from EPEL. The CR repository is enabled. A few days ago I launched an update, which brought in close to 1 GB of packages. I had some weird problems on two clients. One is an old Dell Optiplex 330 with a legacy video card. [root at cybermule:/] # lspci | grep -i vga 01:05.0 VGA compatible controller: Advanced Micro Devices, Inc.

https://bugs.freedesktop.org/show_bug.cgi?id=109407 Bug ID: 109407 Summary: GTX 1050 fails to initialise acceleration Product: xorg Version: unspecified Hardware: Other OS: All Status: NEW Severity: normal Priority: medium Component: Driver/nouveau Assignee: nouveau at

Hi All I received a raw data set with one record per tennis player (both male and female) and then i cured it by aggregation i.e by 4 age groups, 2 gender levels and 6 income levels. Gender and Income are categorical variables. Please advise me how to use 'R' to model this data set (Actually, i want to know the right regression technique and steps to do that, including removing

On Thu, Aug 22, 2013 at 11:23 AM, Steven Newbury <steve at snewbury.org.uk>wrote: > On Wed, 2013-08-21 at 23:59 -0700, Dmitri Gribenko wrote: > > On Wed, Aug 21, 2013 at 11:04 PM, Steven Newbury <steve at snewbury.org.uk> > wrote: > > > I've been trying > > > to get x32 ABI support working in Clang and compiler-rt, I based off > the > > >