similar to: Does R accumulate memory

Dear List: A few weeks ago I posted some questions regarding data simulation and received some very helpful comments, thank you. I have modified my code accordingly and have made some progress. However, I now am facing a new challenge along similar lines. I am attempting to simulate 250 datasets and then run the data through a linear model. I use rm() and gc() as I move along to clean up the

Dear List: First, many thanks to those who offered assistance while I constructed code for the simulation. I think I now have code that resolves most of the issues I encountered with memory. While the code works perfectly for smallish datasets with small sample sizes, it arouses a windows-based error with samples of 5,000 and 250 datasets. The error is a dialogue box with the following: "R

Dear all: Assume I have 3 distributions, x1, x2, and x3. x1 ~ normal(mu1, sd1) x2 ~ normal(mu2, sd2) x3 ~ normal(mu3, sd3) y1 = x1 + x2 y2 = x1 + x3 Now that the data I can observed is only y1 and y2. It is easy to estimate (mu1+m2), (mu1+mu3), (sd1^2+sd2^2) and (sd1^2+sd3^2) by EM algorithm since y1 ~ normal(mu1+mu2, sqrt(sd1^2+sd2^2)) and y2 ~ normal(mu1+mu3, sqrt(sd1^2+sd3^2)) However, I want

Hello everybody, I need to setup a Domain/subdomain environment with Windows AD. All the DCs run Windows Server 2012 R2. All domains (root and subdomains) The forest and domain functional level are set to Windows 2008 R2. I want to use Samba 4 server as fileservers in these domains, but up to now I have trouble adding Samba 4 member servers to Windows AD. My test environment is made of 2

Windows 7, R 2.12.1 Colleagues, I am trying to understand the n.for.2means function. The code below is a copy of the function (renamed to n.for.2means.js). I have inserted a single line of code towards the bottom of the function which uses the cat function to print the value of n1. You will note the value (preceded by stars) is printed as 1. The function (1) prints a lot of output without any

Dear R helpers I have following data stocks <- c("ABC", "DEF", "GHI", "JKL") prices_df <- data.frame(ABC = c(17,24,15,22,16,22,17,22,15,19),                                          DEF = c(22,28,20,20,28,26,29,18,24,21),                                           GHI = c(32,27,32,36,37,37,34,23,25,32),                                          

hello, I would like to create the following barplot: I have 4 different data sets (same length + stddev for each data point) data1 sd1 data2 sd2 data3 sd3 data4 sd4 now, I'd like to plot in the following way: data1[1],data2[1],data3[1],data4[1] with it's sd-values side-by-side at one x-axis label (named "position 1") and each bar in different colors.

For several years, I have been using Splus to analyze an ongoing series of datasets that have a bimodal distribution. I have used the following functions, in particular the ms() function, to estimate the parameters: two means, two standard deviations, and one proportion. Here is the code I've been using in S: btmp.bi <- function(vec, p, m1, m2, sd1, sd2) {

I want to obtain a barplot with error bars and a mean plot with error bars with other scale on the left in the same plot. I need help to get the same x axis (centered) when overlay two plots (barplot2 and plotCI (or lineplot.CI) with errorbars), with diferent y axis. I use par (new=T) but the X axis names are not centered with the figures. An example of my data:

Hello R-helpers, I want to ask your opinion since I am not so sure how to do it. This is regarding one part of my paper project and my situation is: Stage I I have 2 groups and for each group I need to compute the following steps; i) Generate 3 random numbers from normal distribution and square them. ii) Repeat step 1 for 15 times and at the end I will get 15 random numbers. I already done

Hi, I run this code to get the power of the test for modified bartlett's test..but I'm not really sure that my coding is right.. #normal distribution unequal variance asim<-5000 pv<-rep(NA,asim) for(i in 1:asim) {print(i) set.seed(i) n1<-20 n2<-20 n3<-20 mu<-0 sd1<-sqrt(25) sd2<-sqrt(50) sd3<-sqrt(100) g1<-rnorm(n1,mu,sd1) g2<-rnorm(n2,mu,sd2)

Hi all, I appreciate the help this list has given me before. I have a question which has been perplexing me. I have been working on doing a Bayesian calculating inserting studies sequentially after using a non-informative prior to get a meta-analysis type result. I created a function using three iterations of this, my code is below. I insert prior mean and precision (I add precision manually

Dear all, I found a discrepancy while performing a power calculation for a two sample t-test in R and S-PLUS, respectively. For given values of sample number (5 each), sd (0.2) , significance level (0.01), and a desired power (80%) I looked for the difference in means. These values differ: 0.5488882 in R and 0.4322771 in S-PLUS (see dump below). Did I overlook any detail or confuse some

Dear R-helpers: My question is how do I efficient and valid correct for multiple tests in a repeated measurement design: Suppose we measure at two distinct visits with repeated subjects a treatment difference on the same variable. The treatment differences are assessed with a mixed model and adjusted by two methods for multiple tests: # 1. Method: Adjustment with library(multcomp)

----- Forwarded Message ----- From: vramaiah at neo.tamu.edu To: "bernhard pfaff" <bernhard.pfaff at pfaffikus.de> Sent: Friday, November 11, 2011 9:03:11 AM GMT -06:00 US/Canada Central Subject: Use of R for VECM Hello Fellow R'ers I am a new user of R and I am applying it for solving Bi-Variate (Consumption and Output) VECM with Co-Integration (I(1)) with three lags on

Hi, I am a Ph.D. student from Québec, Canada. I’m a beginner with R and Bioconductor. Until now the only experience I have is in analyzing microarray data using affy and limma packages. Now I am trying to analyze Rat Gene 10 st arrays and I would like to run RMA analysis and Smyth moderated t test on those arrays. Since no cdf official package is available for those arrays, after reading many

I have historically noticed that in ZFS, when ever there is a heavy writer to a pool via NFS, the reads can held back (basically paused). An example is a RAID10 pool of 6 disks, whereby a directory of files including some large 100+MB in size being written can cause other clients over NFS to pause for seconds (5-30 or so). This on B70 bits. I''ve gotten used to this behavior over NFS, but

Hi, I've got a dataframe like this: df = data.frame(a=rnorm(100,1),b=rnorm(100,10),c=rnorm(100,100),d=rnorm(100,-100)) and I want to calculate sd1 for (a,b,c) for each entry, and sd2 for (b,c,d) for each entry. I don't seem to find the answer using aggregate or apply, How can I do this? Thanks in advance, Cheers, Albert.

I am needing to create a new identifier variable for a data set which has no ID variable in the original file. I am basically wanting to take the count of each row and add "sd" in front of it - so it would look like so sd1 sd2 sd3 sd4 sd5 etc....... I have no idea how to do this. I am a SAS user trying to learn R. This question may have been answered previously, but I could be

Hello All, I posted a similar question before, but the direction was driven to whether my case is suitable for a wilcoxon test. After research about the appropriateness, I am pretty sure that a wilcoxon test is the right tool for my case. But how to compute the power of the test is still an unanswered question bothering me. The basic stats of my two paired samples are: mean1 = 0.0032, sd1 =