similar to: Difference between "R CMD build --binary" and "R CMD INSTALL --build"

Hi all, Unfortunately I must use winXP at my job, so I'm trying install from source RMySQL. Here are some details about this problem: - R 1.7.1 - RMySQL 0.5-2 - mysql 4.1.0-alpha-max-nt I followed the instructions posted in http://www.biostat.jhsph.edu/~kbroman/Rintro/Rwinpack.html and the following messages appeared. BTW, thanks in advance for your help and comments. C:\Program

Hi folks, Debian 504 64-bit I found following document; http://www.biostat.wisc.edu/~kbroman/Rintro/ Whether it is the right document for installing Emacs+ESS and R so that R can run on Emacs? TIA B.R. Stephen L

Hi all, I am trying to re-compile some "unmaintained" (it seems) packages, namely rSoNIA and dynamicnetwork from: http://csde.washington.edu/~skyebend/rsonia/rsoniaDemo/ These packages predates R 2.10.0 so they need to be recompile. After split the single big file in /man in each packages into a file for each function + some minor fix, I successfully manage to recompile and load

Hi, I'm a group of functions and I would like to create a package for load in R. I have created a directory named INE and a directory below that named R, for the files of R functions. A have created the files DESCRIPTION and INDEX in the INE directory. The installation from local zip files, in the R 2.3.0, results but to load the package I get an error like: 'INE' is not a

I found the following document on making R packages. But it is old. I'm wondering if there is more current ones and hopefully more complete ones. http://biosun1.harvard.edu/courses/individual/bio271/lectures/L6/Rpkg.pdf

Hi all, I'm using windowsXP and R 2.10.0. I downloaded "randomForest 4.5-33.tar.gz" from its archive, but how do I make it into a installation ZIP file? Thanks, Ted

Hi R Gurus! I have 2 questions, please: a. I'm putting together a little baby package on SUSE Linux 10.1. I want to create a zip of the package for windows. How should I create that please? b. I don't know if the following is possible but here it is: I have R and a bunch of libraries set up very nicely. I would like to hand off this setup to someone else. Should I just copy

Hello useRs, I am trying to put my funcs in a package to avoid clutter in my workspace as the funcs are now in .Rprofile. All plain R code no compilations. Using win XP with a full cygwin install and R2.12 I first did package.skeleton("mypack",list="getdfv", namespace=T) # just a single func which created a folder with the required stuff in it. Calling R CMD build creates a

Hi the list, Some rumour (!) say that is it possible to prepare some tests for checking our code using .Rin and .Rout. It seems to be a very good practice, but I did not manage to find information on it. So does someone know how it works ? What are we suppose to write in Rin ? More precisely : - I have a package myPack.r in directories ~/myR/myPack/R/ - I create the directory

Dear all, I writing my first package and everything seems to work (at least up to now) However when I try to build documentation (.dvi or .pdf), using Rcmd Rd2dvi.sh --pdf mypack.Rd I get a mypack.pdf whose title is "R documentation of mypack.Rd" instead of "The mypack package" as it should be, is it right? Also Version, Title, ....License, namely info from the DESCRIPTION

Hello. I have what I know to be a simple question, but never having done anything like this it is pretty tough. I'm trying to write an R package. I have a collection of functions that I loaded into R and then used package.skeleton(). After editing everything in the resulting folder, call it NewPackage, I tried to follow along with some instructions I found for Windows users. I installed

Greetings, I am trying to run a short script from a shell: c:\projects\hell>Rscript --default-packages=mypack X:/4Stephen/commit/curve.R > X:/4Stephen/commit/run1.out Loading required package: utils Warning message: package 'RODBC' was built under R version 2.12.2 Error: could not find function "normalize" Execution halted Warning message: closing unused RODBC handle 1

Hi Thanks once again for your help, I do appreciate it..... however.... Here is what I get with your test.... (under tcsh - i normally use bash, but I will keep everything the same) users/mwatson> env http_proxy=http://wwwcache.bbsrc.ac.uk:8080/ R >options(internet.info=0) >update.packages() trying URL `http://cran.r-project.org/src/contrib/PACKAGES' unable to connect to

OK, I really am struggling with this one! Forgive me if I am being stupid.... I am running R 1.7.1 on Suse Linux 8.1. I connect to the internet through a proxy so I have: IAHC-LINUX03:~ # echo $http_proxy wwwcache.bbsrc.ac.uk:8080 IAHC-LINUX03:~ # echo $HTTP_PROXY wwwcache.bbsrc.ac.uk:8080 just in case ;-) SO, i go into R and I get: >

> > Generally I find it's good to look at examples that work. For > examples of packages using tests, look at source packages on CRAN. > Run the tests on them (using R CMD check), and see what gets produced. > Do you have the name of a package that use it ? I try the 10 first package, and 10 other at random, but none of them use tests... >>> Create tests/myPack.R

OK, dumb question, and it is probably in the docs somewhere, but after 12 months working with R and quite a while looking at the docs, I still don't know (or have forgotten) how to replace all NA values in a matrix at once with some other value. I can do it column by column using is.na(), but I can't figure out how to do it for the whole matrix. My apologies, I am ashamed ;-) Michael

Hello experienced R-ers, I'm converting from S-Plus Win 98SE to SuSE 8.1, R 1.62 and have run into som problems. 1) When I use help.start() netscape comes up OK and all links are accessible except "Search Engine & Keywords" : search doesn't work and the keywords from base doesn't respond either. ?command within R gets netscape running and works OK. 2) I haven't

Hi Now a more theoretical question. I have two correlation matrices - one of a set of variables under a particular condition, the other of the same set of variables under a different condition. Is there a statistical test I can use to see if these correlation matrices are "different"? Thanks Mick

Quite a simple one really! When I run boxplot(), the labels on the X axis are horizontal, and I want them vertical. So I did: par(las=3) boxplot(...) And my labels just aren't there anymore.... Any help???

> On 19 Feb 2018, at 12:25, Duncan Murdoch <murdoch.duncan at gmail.com <mailto:murdoch.duncan at gmail.com>> wrote: > > On 19/02/2018 5:47 AM, Michael Hannon wrote: >> Thanks, Duncan. The files in question are Emacs Org-mode files, and I >> think these are more or less isomorphic to Rmd files, but I haven't >> used Org-mode in a long time, so I think