Displaying 20 results from an estimated 3000 matches similar to: "link to a vignette/overview document in .Rd file?"
2005 Mar 20
1
Re: [R-SIG-Mac] NaN and linear algebra
No, blas/veclib is tested, so aprt this extreme case you should report
some other more commonly used cases in which something fails on OS X.
This will help us to work it out.
As said, I'll try some tests without using veclib and let you know.
I've fowarded this mail to r-devel, which seems to be the right place,
so for future msg on the subject please use r-devel.
stefano
On
2008 Dec 10
0
FW: Kegg.db with GOstats
-----Original Message-----
From: Robert Gentleman [mailto:rgentlem@fhcrc.org]
Sent: Wed 10/12/2008 18:47
To: Legaie, Roxane
Subject: Re: Kegg.db with GOstats
Hi Roxanne,
Can you redirect your question to the mailing list. And, you can find the
answer in the mailing list archives...
best wishes
Robert
Legaie, Roxane wrote:
> Dear Robert Gentleman,
> I am currently working on
2008 May 09
1
str and class
In previous versions of the gnm package, the terms component of "gnm"
objects had a "classID" attribute. This caused problems when used with
str as the following simple example illustrates:
> x <- 1
> attr(x, "classID") <- "type1"
> str(x)
Class 'type1' Class 'type1' Class 'type1' Class 'type1' Class
2008 May 09
0
Incorrect fix for PR#9316: Cook's Distance & plot.lm
Bug PR#9316 noted an inconsistency between the Cook's distance contours
on plot.lm(x, which = 5) and the values given by cooks.distance(x) -- as
shown in plot.lm(x, which = 4) -- for glms:
http://bugs.r-project.org/cgi-bin/R/Analyses-fixed?id=9316;user=guest;selectid=9316
The suggested fix was to modify the contour levels by a dispersion
factor, implemented as follows:
dispersion <-
2008 May 14
0
Cook's Distance in GLM (PR#9316)
Well I suppose a warning's not going to hurt. Even in a case like the
occupationalStatus example where you know some points have been fitted
exactly, it might be useful to be reminded that the standardised
residuals for these points are then NaN and cannot be displayed. Of
course when you don't know in advance that this issue will arise, there
is even more reason to give a warning.
2023 Jan 30
1
thunderbird-102.7.1-1.el8 breaks OAuth authentication
On 29/01/2023 18:24, Orion Poplawski wrote:
> It seems that thunderbird-102.7.1-1.el8 (at least on CentOS Stream)
> broke OAuth authentication with outlook.office365.com.? Downgrading to
> 102.4.0-1.el8 resolved the issue.
>
> Error console reports:
>
> XHR POST https://login.microsoftonline.com/common/oauth2/v2.0/token
> [HTTP/1.1 400 Bad Request 293ms]
>
> Is
2005 Oct 12
1
Using matprod from array.c
Hi,
I was wondering if I could use the matprod function from array.c in my own C routine. I tried the following as a test
/* my_matprod.c */
# include <Rinternals.h> /* for REAL, SEXP etc */
# include <R_ext/Applic.h> /* array.c says need for dgemm */
/* following copied from array.c */
static void matprod(double *x, int nrx, int ncx,
double *y, int nry, int ncy, double *z)
2005 Oct 03
1
storage.mode, C data types and speed
Hi,
I am trying to speed up part of an algorithm in which certain columns of a large matrix (X) are replaced by the element-wise product of a matrix (M) and a vector (v). In R, the code might be
X[, ind] <- M * v
I have written a small C routine to do this for me, but the timing depends on how I define the storage.mode of the objects in R and the data types in C, in a way which I don't
2012 Mar 07
1
gsub: replacing double backslashes with single backslash
Hello everybody,
this might be a trivial question, but I have been unable to find this using
Google. I am trying to replace double backslashes with single backslashes using
gsub. There seems to be some unexpected behaviour with regards to the
replacement string "\\". The following example uses the string C:\\ which should
be converted to C:\ .
> gsub("\\\\",
2007 Aug 13
2
ZFS Boot for Solaris SPARC
Hi,
Searching this alias I can find a number of guides and scripts that
describe the configuration of Solaris to boot from a ZFS rootpool.
However, these guides appear to be Solaris 10 x86 specific.
Is the creation of a ZFS boot disk available for Solaris SPARC ?
If so, could you point me in the direction of where I can obtain details
of this new feature from.
Thanks and Regards,
Paul.
PS:
2010 Dec 06
1
R with ATLAS avoids Linux cpu affinity
Hi all,
I have a problem with cpu affinity in my R-2.11.1 installation compiled against ATLAS running on a Linux (Ubuntu 10.04) cluster under GridEngine. I wish to use Grid Engine's core binding feature to bind user processes into the number of cores they request on the cluster, thus preventing badly behaved multi-threaded libraries from consuming more cores than requested. An example of
2006 Jan 18
0
Loading of namespace on load of .Rdata (was strange behaviour of load)
Last week Giovanni Parrinello posted a message asking why various packages were loaded when he loaded an .Rdata file. Brian Ripley replied saying he thought it was because the saved workspace contained a reference to the namespace of ipred. (Correspondence copied below).
This begs the question: how did the reference to the namespace of ipred come to be in the .Rdata file? Brian did say it is
2006 Jan 18
2
Loading of namespace on load of .Rdata (was strange behaviour of load)
Last week Giovanni Parrinello posted a message asking why various packages were loaded when he loaded an .Rdata file. Brian Ripley replied saying he thought it was because the saved workspace contained a reference to the namespace of ipred. (Correspondence copied below).
This begs the question: how did the reference to the namespace of ipred come to be in the .Rdata file? Brian did say it is
2010 Aug 10
0
useR! 2011: announcement and call for tutorials
We are pleased to announce that the R user conference
useR! 2011
is scheduled for August 16-18, 2011, and will take place at the
University of Warwick, Coventry, UK.
As for the predecessor conferences, the program will consist of two
parts: invited lectures and user-contributed sessions (abstract
submission will be available online later this year). Prior to the
conference, there will be
2010 Aug 10
0
useR! 2011: announcement and call for tutorials
We are pleased to announce that the R user conference
useR! 2011
is scheduled for August 16-18, 2011, and will take place at the
University of Warwick, Coventry, UK.
As for the predecessor conferences, the program will consist of two
parts: invited lectures and user-contributed sessions (abstract
submission will be available online later this year). Prior to the
conference, there will be
2011 Jan 15
0
useR! 2011: abstract submission & registration open
We are happy to inform you that abstract submission and registration for
useR! 2011 is now available online, see
http://www.R-project.org/useR-2011
This meeting of the R user community will take place at the University
of Warwick, Coventry, UK, August 16-18, 2011.
The conference schedule comprises invited lectures and user-contributed
sessions. In addition half-day tutorials presented by R
2011 Jan 15
0
useR! 2011: abstract submission & registration open
We are happy to inform you that abstract submission and registration for
useR! 2011 is now available online, see
http://www.R-project.org/useR-2011
This meeting of the R user community will take place at the University
of Warwick, Coventry, UK, August 16-18, 2011.
The conference schedule comprises invited lectures and user-contributed
sessions. In addition half-day tutorials presented by R
2006 Jul 11
1
Linux/MacOSX and "X11 protocol error: BadWindow..." warnings
This concerns behaviour which has been noted previously, for
example see
http://tolstoy.newcastle.edu.au/R/help/05/03/0844.html
http://tolstoy.newcastle.edu.au/R/help/03b/6873.html
and especially the thread
http://tolstoy.newcastle.edu.au/R/help/04/08/3025.html
I find that it affects both my Linux and Mac OS X setups.
It is a feature which has caused some (at least John Fox in
the
2005 Jan 22
4
rsync failing with return code 13
Hi there,
I'm running rsync on an nslu2 (using nslu2-linux) and it keeps failing
with return code 13. The man page doesn't give a good description of
what this means ("Errors with program diagnostics") so could someone
give me a clue. as to what diagnostics rsync is running and reasons why
they might be failing? The only magic to note is the machine only has
32MB of ram so low
2004 Dec 10
1
IP address given to WINS on a server with multiple interfaces
I have a server that has one interface onto a private subnet, and
another connected to our LAN. I found that the IP address in WINS was
the IP address of the private interface, so things weren't working. By
using the "interfaces" setting in smb.conf I was able to force the use
of the correct IP address.
Now, I notice that the manual says, "By default Samba will query the