similar to: File23525

Dear all, I need to read an ASCII file with diffent length lines. This is what is contained in the file gene.txt: 1st line ID description snp_id genotype 2nd line 10003 Low rs152240 3rd line 10003 Moderate rs189011 TC 4th line 10004 Conservative rs152240 GC 5th line 10004 Bad rs154354 6th line 10013 Bad rs152240 7th line 10019 Conservative rs152240 AC etc... This is what I would like to obtain

Dear all, I have a surprising problem with the representation of frequencies in a histogram. Consider, for example, the R code: b<-rnorm(2000,3.5,0.3) hist(b,freq=F) When I plotted the histogram, I expected that values in the y-axis (the probability) varied between 0 and 1. Instead, they varied within the range 0-1.3. Have you got any suggestion for obtaining a correct graph with

Dear all, is there a automatic method to obtain Odds Ratio estimates and their confidence intervals from a GLM Logistic model? Thanks Cristian ============================================= Cristian Pattaro ============================================= Unit of Epidemiology & Medical Statistics Department of Medicines and Public Health University of Verona cristian@biometria.univr.it

Hi! How can I fill with colors a portion of a graph (e.g.: I want fill in red the area within two confidence intervals)? Thank you very much Cristian ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Cristian Pattaro ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Unit of Epidemiology & Medical Statistics University of Verona Tel +39 045 8027668 fax +39 045 505357 cristian at biometria.univr.it

Dear all, I'm using the package "Genetics", and I'm interested in the computation of D' statistics for Linkage Disequilibrium, for which the LD() command has been realised. Unfortunately I don't find any reference on "how" the D' is computed by the LD() function. In the package documentation it is generally referred as "MLE" estimation, but

Hi Cristian, I don't know about a R routine for exact CIs, but I found a function called "ageadjust" using a gamma distribution approximation some time ago -take a look at http://medepi.org/epitools/rfunctions/index.html. That Webpage seems a bit outdated now, but the calculations given in the ageadjust functions should still work, I think. Maybe this helps; regards Heinrich.

hi all, I''m stuck with this: in environment.rb I have: Inflector.inflections do |inflect| inflect.plural /istituto/, ''istituti'' inflect.plural /Istituto/, ''Istituti'' inflect.irregular ''Istituto'', ''Istituti'' inflect.irregular ''istituto'',

Dear R users, I am trying to fit a Cox model such as: Surv(time,event) ~ X1+X1:X2 or Surv(time,event) ~ X1*X2 -X2, This code is working with coxph but not with cph (nor with psm), and the error message is: Error in if (!length(fname) || !any(fname == zname)) { : missing value where TRUE/FALSE is required Any idea about the cause of the problem and how to manage it within the Design

Hello, I have a strange problem affecting samba-3.0.10-1.4E.12.2 on a Red Hat Enterprise Linux AS release 4 system. We have a multi-domain configuration here at University of Verona (Italy). We use Samba as PDC for several faculties. Each faculty has its own daemon instance and its own smb config file: [root@ldapvr1 ~]# ls /etc/samba/smb.* /etc/samba/smb.conf

hi all, I'm facing a problem with a brand new installation on fedora 9. packages were updated right after the installation, so the samba packages are of the latest available version (3.2.0-17.fc9). at the first run were created all the tree of tdb files under /var/lib/samba. now I create a new user: [root@barbara Scrivania]# smbpasswd -a barbara New SMB password: Retype new SMB password:

Hi all! Do you know if there is any R function/package that can be used to estimate "logit" models with panel data and forecasting? Thanks, Moysés. -- Moysés Nascimento Bacharel em Estatística/UFES Mestre em Estatística Aplicada e Biometria/UFV Doutorando em Estatística e Experimentação Agropecuária/UFLA moysesnascim@gmail.com [[alternative HTML version deleted]]

Dear all, I'm working with R 1.2.2 on win98 (256Mb RAM) with ESS 5.1.18. It happens that the start-up is very slow. I don't know exactly how to measure, but with a simple watch I recorded 15 seconds, while the startup of S+ 2000 (Sqpe+4 under ESS) takes around 3 seconds. Tha fact is that sometimes it takes almost a minute (58.30 sec recorded) for the prompt to appear! And ESS gives me an

Dear R users, I would like to employ count data as covariates while fitting a logistic regression model. My question is: do I violate any assumption of the logistic (and, more in general, of the generalized linear) models by employing count, non-negative integer variables as independent variables? I found a lot of references in the literature regarding hot to use count data as outcome,

I need to join my Samba 2.2.3a to a TNG Domain (which stores users and machines account into OpenLDAP) using it as a password server. Provided that TNG is working fine in authenticating users on W2K machines, once they are logged in they should (in my intentions) see Samba 2.2.3a shares. In order to do this I provided the following configuration for Samba: workstation = <tng_domain>

Hi all. I'm "trying" to install R on a linux box (mandrake 7.1) but when I do make install it stops with the following errors: /usr/bin/install: zero.so: File doesn't exist (translated fron italian!!) make[2]: *** [install-objects] Error 1 make[2]: *** [install] Error 2 make: *** [install] Error 1 Where I'm wrong? The only change I've done is ./configure

Hi all. A simple question. Is there a function to compute the Odds Ratio and its confidence intervall, from a logistic model (glm(.......,family=binomial....). I've written my own, but certainly someone did a better job. Thank you in advance, Stefano *********************************************** Stefano Calza Istituto di Statistica Medica e Biometria Universit? degli Studi di Milano Via

Hi all. I'm wondering why there isn't yet the debian version of R 1.2.3. Am I missing something? TIA, Stefano ******************************* Stefano Calza Istituto di Statistica Medica e Biometria Universit? degli Studi di Milano Via G. Venezian, 1 20133 Milano tel. +39 02/2361302, 02/70600908 fax 02/2362930

Dear all, how can I get the R-squared of the sequence of models fitted by step(....,direction="forward")? TIA, Stefano ******************************* Stefano Calza Istituto di Statistica Medica e Biometria Universit? degli Studi di Milano Via G. Venezian, 1 20133 Milano tel. +39 02/2361302, 02/70600908 fax 02/2362930

Hi, is there a function/library like print.display by F.Harrel for R? BTW Harrel clearly states in the reame that "you may not port the library to R" ... Thanks, Stefano. -- *********************************************** Stefano Calza Istituto di Statistica Medica e Biometria Universit? degli Studi di Milano Via G. Venezian, 1 20133 Milano tel. +39 02/2361302, 02/70600908 fax

Hello people... I had to sign up in the list because I don't know what else I could do... I can't find my error anywhere!! :( The thing is that I have a Linux server with Ldap (openldap2.3) + Samba (3.0.26) + smldaptools (0.9.2-3), and I want to authenticate a windows 2000 Professional client machine against that server, but it won't work!! The domain is called "JOME", and