similar to: How to install a package that needs to see oher pkg dependencies:

Dear useR I want to know why package gregmisc did not work very well. I did not find this package in my library directory. > local({a <- CRAN.packages() + install.packages(select.list(a[,1],,TRUE), .libPaths()[1], available=a, dependencies=TRUE)}) trying URL `http://cran.r-project.org/bin/windows/contrib/2.0/PACKAGES' Content type `text/plain; charset=iso-8859-1' length 21630 bytes

Hallo zusammen. Da ich R zur Erstellung meiner wissenschaftlichen Arbeit brauche versuchte ich dies heute zu installieren. Zunächst in der Vrsion 1.9.1 (rw1091.exe). Ich benötige das Package "gregmisc" und installierte dies von CRAN. Bei der Installation tritt folgende Meldung auf: trying URL `http://cran.r-project.org/bin/windows/contrib/2.0/gregmisc_2.0.0.zip' Content type

The link from http://cran.r-project.org/src/contrib/Descriptions/gregmisc.html to the windows package gregmisc_2.0.0.zip is broken. Also, could the appropriate email address for reporting web site problems please be added to the website in some conspicous place? Gregory R. Warnes Associate Director, Non-Clinical Statistics Pfizer Global Research and Development LEGAL NOTICE\ Unless

Hi, If I use x<-1:10 y<-rnorm(10,0,1) ### pdf(file="c:\\aldi\\test.pdf") plot(x,y) segments(x,y,x+2,y+2) segments(x,y,x+0.5,y+0.5,col=3) ### dev.off() ### q() Is there a way that I can imbed in the graph plot for each point defined by x to x+0.5 and y to y+0.5 (and colored in green) a different hyperlink? For example point one (together with the green tail) will have the

Hi, Is there a smart way in the R graphs to create a line that is broken in intervals based on the indicator given below. following is a small test graph Location,indicator,otherinfo 1.2,1,2.2 2.5,1,2.5 3.7,1,2.3 20.1,2,4.3 22.5,2,5.2 25.0,2,3.4 27.3,2,2.2 35.1,3,3.4 37.0,3,7.2 38.0,3,6.1 40.1,3,5.4 52.9,3,3.3 Right now in the plot the line is continuous, but I would like to have it broken

Hi All, I've been working on updating the 'genetics' package. As a consequence of the upgrade, .First.lib() looks like: .First.lib <- function(libname, pkgname) { if (!require(combinat)) warning("Unable to load 'combinat' library. Function `diseq.ci' will fail.") require(gregmisc) genotype <-

Hi, I have a data.frame with many variables for which I am performing the mean by subgroup, for a pair of variables at a time, where one of them for each pair defines the subgroup. The subgroups in the x$cm1 are 0, 1 and 2. x ph1 cm1 0.2345 2 1.2222 1 2.0033 0 0.0000 2 1.0033 1 0.2345 0 1.2222 2 2.0033 0 0.0000 1 1.0033 2 > meanbygroup <- as.vector(with(x, by(x$ph1, x$cm1, mean)))

Hi, I was wondering if there is a way to figure out why in SAS random beta coefficients are 0 vs. in R the beta-s are non zero. The variables of the data are nidl, time, and sub (for subject). Time and nidl are continuous variables. I am applying random coefficients model. Any input is greatly appreciated, Thanks, Aldi 1. mixed model in SAS: ====================== ods output SolutionR =

> Date: Mon, 20 Feb 2006 16:43:55 -0600 > From: Aldi Kraja <aldi at wustl.edu> > > Hi, > Using package gclus in R, I have created some graphs that show the > trends within subgroups of data and correlations among 9 variables (v1-v9). > Being interested for more details on these data I have produced also the > var-covar matrices. > Question: From a pair of two

Hi, In Splus7 this statement xlrmN1 <- sample(c(0,1,2),400 ,prob=c(0.02 ,0.93 ,0.05 )) worked fine, but in R the interpreter reports that the length of the vector to chose c(0,1,2) is shorter than the size of many times I want to be selected from the vector c(0,1,2). Any good reason? See below the error. > xlrmN1 <- sample(c(0,1,2),400 ,prob=c(0.02 ,0.93 ,0.05 )) Error in

Hi All, Since I changed the gregmisc package into a bundle, I almost daily questions asking how to get the individual packages contained in the bundle. The standard example arises when someone attempts to install and then use my 'genetics' package which depends on the 'gdata' package contained within the 'gregmisc' bundle. The install succedes, but when the user does

Hi, I have a vector Y1 <-c(8, 11, 7, 5, 6, 3, 6, 3, 3) and an index iy <-c(c(1, 2),c(1 2), c(1, 2, 3, 4), c(2, 3, 5), c(4), c(5, 6, 7), c(7, 8, 9)) how can I produce the mean, or the sum of the elements specified in the index iy from the vector Y1? expecting something like this for the sum: Y2 19 19 31 24 5 15 12 I thought lapply function may perform this, but does not work:

Hi, Using R 2.15.1 on Windows 7. Have installed both versions 32 and 64bit. In both of them among others I have installed a package rgenoud When I open R gui of 32bit and write library(rgenoud) it responds by showing a functional rgenoud version 5.7-8. The same it does on Rgui 64bit. Now I am working in cygwin (v. 1.12.4.0) with xwin. Normally before when I had installed a package, I only had

Hi, Based on par function, I can split the screen into two parts left and right. I wish x occupies the half left screen, and all plants occupy half right screen, which happens right now. But I wish the right screen, to be split in 3 or more vertical parts where each pair of the same type of plant, are together in its own block of boxplot, because each plant has its own unit of measure.

Hi, I have a large group of jobs, some of them are running on the same directory. All of them in batch mode. What are the best ways to protect from corrupting the results two or more jobs running on the same directory. One, I would think can be to run each job in a separate directory, collect the results and after remove the directories. But I have thousands of jobs that will run in parallel

Let me redirect the topic a bit. I've been considering unbundling gregmisc. The pro would be that people would find the component packages (i.e. gdata) more easily. The con is that the packages have a number of interdependencies, so you pretty much will need to get most of them anyway. As the latest gregmisc bundle contains a gregmisc package that is just a stub that depends on and loads

Let me redirect the topic a bit. I've been considering unbundling gregmisc. The pro would be that people would find the component packages (i.e. gdata) more easily. The con is that the packages have a number of interdependencies, so you pretty much will need to get most of them anyway. As the latest gregmisc bundle contains a gregmisc package that is just a stub that depends on and loads

Hi, I am running a large number of jobs (thousands) in parallel (linux OS 64bit), R version 2.14.1 (2011-12-22), Platform: x86_64-redhat-linux-gnu (64-bit). Up to yesterday everything ran fine with jobs in several blocks (block1, block2 etc) of submission. They are sent to an LSF platform to handle the parallel submission. Today I see that only one of the blocks (the 19) has not finished

Hi, I am working with some extremely small p-values and I want to capture the corresponding quantiles. I see the help file it says: 'qnorm' is based on Wichura's algorithm AS 241 which provides precise results up to about 16 digits. What happen after the 16th digits? If I am running R in a server 64-bit, can that improve the chances that beyond 16th digits to still have

Hi, I have a data.frame of this kind: x obs movie earned rating 1 P1 3.2 xx 2 P1 4.2 xx 3 P1 5.2 xx 4 P1 6.2 xx 5 P2 3.5 xx 6 P2 6.5 xx 7 P2 7.5 xx 8 P2 4.5 xx 9 P2 4.5 xx 10 P3 4.8 x1 11 P4 7.3 x2 12 P4 3.2 x2 13 P4 3.3 x2 I want to overlay the