similar to: Sweave echoing comments (again)

Hi list, I was using Sweave and was wondering if anyone has had any luck changing the font colors of the code chunks. For instance, in my .Rnw preample I tried including: === \usepackage[usenames]{colors} \definecolor{darkred}{rgb}{0.545,0,0} \definecolor{midnightblue}{rgb}{0.098,0.098,0.439} \DefineVerbatimEnvironment{Sinput}{Verbatim}{fontshape=sl,formatcom={\color{midnightblue}}}

Hi R users. I've got a problem in producing the pdf file from Latex with R code. When I run the code Sweave("example.Rtex") in R it seems working, but when I run the Latex file it doesn't. The code error shown to me is below: *Runaway argument? {echo=FALSE} data<- read.csv("C:\\Users\\Daniele\\Desktop\\dati\\dati_england ! File ended while scanning use of \FV at

Hello Folks, When I run the document below through sweave, rgui.exe/rsession.exe leaves a file handle open to the sweave-001.pdf graphic (as verified by process explorer). Pdflatex.exe then crashes (with a Permission Denied error) because the graphic file is locked. This only seems to happen when there is an error in the sweave document. When there are no errors, no file handles are left open.

Hello all, Sometimes I get to make an R code chunk (in Sweave) which is longer then the margins of the page. Is there a way to force it to "go to the next line" (in Sweave) once that happens? Here are two cases this happens in the resulting .tex file (one is a "hard" case, and the other is simpler) \begin{Schunk} \begin{Sinput} >

Dear all, I have trouble with R-beta sweaving files that include definitions with \SweaveInput in combination with keep.source = TRUE Symptom: SInput is taken from too far down the input file (the shift is the number of lines of the included file). Is that known? Searching didn't turn up anything, yet I think there are more people than just me using keep.source. Example: $

In an Sweave slide, I want to use sem::read.moments() and sem::specify.model(), which work by using scan() to read the following lines, up to the first blank line. However, Sweave throws an error: > Sweave("sem-thurstone.Rnw") Writing to file sem-thurstone.tex Processing code chunks ... 1 : term hide (label=arrests-setup) 2 : echo term hide (label=thurstone-data) Error:

Hi Folks, I'm surprised, but I didn't find this question addressed anywhere. I'd like to generate a LaTeX caption with R code. I've tried the code below, but I get the following TeX error: ! Argument of \@caption has an extra }. <inserted text> \par l.21 } Any thoughts? Perhaps I'll have to write the "\caption{}" text with R? thanks!

Hi, I am having trouble getting \alt (or \altenv) to work with Schunk/Sinput and was wondering if anybody had had success? With the slide \begin{frame}[fragile]\frametitle{Basic R} \alt<2>{ <<echo=TRUE>>= 2+2 @ }{ <<echo=TRUE, eval=FALSE>>= 2+2 @ } \end{frame} I get the error message: ! FancyVerb Error: Extraneous input `> 2+2 \end {Sinput} \end

Hello, recently I read about the SweaveListingUtils package and now I want to try it out. However, I can not make it work... Below a minimal example. The problem seems to be the following line (generated by SweaveListingPreparations()?): \ifthenelse{\boolean{Sweave@gin}}{\setkeys{Gin}{width=0.6\textwidth}}{}% If I comment out this line, it works. What can I do about this? I am using the

I'm trying to put together a poster using the LaTeX a0poster package and including some things from pstricks to get gradient shading, etc. The problem is that the default environments used by Sweave don't work where I need them. A simple code chunk like <<eval=FALSE>>= x <- 1 @ buried in a minipage within a psshadowbox gives the error Runaway argument? > x <- 1

Dear Friends, I not sure whether this is an Sweave or a beamer problem. The Rnw file: \documentclass[compress,smaller]{beamer} %\documentclass{article} %\usepackage{beamerarticle} \usepackage{Sweave} \title{Psychophysics II} \date{September 9, 2008} \begin{document} \frame{ \begin{Schunk} \begin{Sinput} > ro <- 0.2 > c <- seq(from = -3, to = 4, by = 0.1) > fn <- 1 -

The following is 'semicolon.Rnw' > \SweaveOpts{engine=R, keep.source=TRUE} > > <<xycig-A, eval=f, echo=f>>= > library(SMIR); data(bronchit); library(KernSmooth) > @ % > > Code for panel A is > <<code-xycig-A, eval=f, echo=t>>= > <<xycig-A>> > @ % Sweave("semicolon") yields the following 'semicolon.tex'

An Sweave file, 'test.Rnw': \documentclass{article} \title{Sweave minimal} \author{MK} \begin{document} \maketitle We try Sweave: <<1>>= data(airquality) summary(airquality) x <- airquality[1, 1] @ I try Sexpr: \Sexpr{x} We plot: \begin{center} <<2, fig=TRUE, echo=FALSE >>= boxplot(Ozone ~ Month, data = airquality) @ \end{center} \end{document} I check the

Tha handy thinb about the fig=TRUE option in Sweave is that you do not have to bother about filenames and starting and stpping the device. I want the the resulting LaTeX to look as: \begin{Schunk} \begin{Sinput} > x <- seq(-2 * pi, 2 * pi, 0.1) > plot(x, cos(x), type = "l", lwd = 4) \end{Sinput} \end{Schunk} \begin{figure} \includegraphics[width=0.6\textwidth]{xx-001}

Hi, I created a Sweave file (see below). when I want to convert tex file generated from it into pdf, I get error message as follows: > texi2dvi("test.tex", pdf=TRUE) Error in texi2dvi("test.tex", pdf = TRUE) : Running 'texi2dvi' on 'test.tex' failed. LaTeX errors: ! Undefined control sequence. l.8 \begin {Schunk} ? ! Interruption. !

Dear all, When I use the cacheSweave package together with the Sweave option keep.source = TRUE, all the LaTeX code before the Sweave code chunk is included in the TeX file to be compiled. For example, with the following Sweave file \documentclass[12pt]{article} \usepackage[nogin]{Sweave} % Sweave options \SweaveOpts{keep.source=TRUE, strip.white=TRUE, eps=FALSE, pdf=TRUE} \begin{document}

Dear All, I try to use Sweave to make a document. But when I use the Sweave() command on it and build a pdf with pdflatex (3.141592-1.40.3) my apostrophes are replaced by some gibberish (an 'a' with a hat on it, a capital A with a arc pointing upwards on it and a capital Y with two points on it). If I manually replace the apostrophes using the keyboard, I get a different looking

Dear useRs-- I have been using Sweave with miktex for years, but on a new install on Windows XP, miktex seems to be hung up on single quotes. See example below. Digging through stackexchange, I found using \usepackage[noae]{Sweave} in the tex file solved the problem. My questions are: --Why would this happen? I have the ae package installed. --If inserting [noae] is the solution, how do I

Dear R-help, I would like to include the documentation of an R function in an *.rnw document processed by Sweave. Because I'm sharing my *.rnw files with colleagues under Linux and Windows (I'm on Mac OS X), I would like a pure R solution. The naive approach doesn't work, because Sweaving this *.rnw file: -------- tmp.rnw -------- \documentclass{article} \begin{document}

Hello, I'm trying to insert R source code (functions) in an appendix of a latex document. I guess the easiest way to do so is to use the package Sweaved (file : Sweaved.sty) provided with the latest R version. Latex succeeds in loading the package, but my problem comes from the use of this very package. I tried to use the 'Schunk' environment, but '#' characters generate