similar to: library manual: documentation of funcs not alphabetically ordered

I construct a pdf package manual in Windows 7 using R CMD Rd2dvi --pdf --no-preview [packagename] Page numbers are listed correctly under 'R topics documented' at the front, but incorrectly (offset by -2 pages) in the Index at the back. Following the hyperlinked page numbers in the Index takes you to the wrong page. 2 pages happens to be the length of the package overview man page inserted

Hello, I have created my own R package and written the documentation in Rd format for each of the functions plus the package itself. However now the functions appear in a random order in the generated PDF and the package documentation entry is placed in between the functions, when I would like it to be first, naturally. Is there an easy way to specify the order of the entries in the generated

Hello, I have been using the TM package to create a TermDocMatrix, which I have saved as a matrix so that I can view word frequencies. Below is a section of the code that I have used and an excerpt of the output: What I wanted to be able to do is to view the output alphabetically - rather than the results being sorted by frequency as below, that an alphabetical list would be generated. This

Hi R-devels, would it be possible to enhance either promptPackage() or the default indexing mechanism for packages so that -- if it exists -- (the contents of) file <pkgname>-package.Rd is sorted first in * the .dvi / .pdf documentation file * the .chm documentation file * the package 00index.html documentation file ? So far I found the following "hand-made" solution

The document R-exts contains the following example of using mathematics in R documentation. \deqn{p(x) = {\lambda^x\ \frac{e^{-\lambda}}{x!}} {p(x) = lambda^x exp(-lambda)/x!} There is a syntax error in there, but that's not my point. The problem is that using "R CMD Rd2dvi" I find that putting the alternate forms of the equation on top of each other doesn't work.

Hi try this: p3dpairs <- function(x,x1, xlim=NULL,ylim=NULL,zlim=NULL,col=par("col"), pch=par("pch"), cex=par("cex"), ...){ if(is.matrix(x)){ z <- x[,3] y <- x[,2] x <- x[,1] } if(is.matrix(x1)){ z1 <- x1[,3] y1 <- x1[,2] x1 <- x1[,1] } if(missing(zlim)) { z.grid <-

Hi How do I concatenate two lists element-by-element? Example: list.1 <- list(temperature=c("hot","cold") , size=c("big","medium")) list.2 <- list(temperature=c("lukewarm") , size=c("massive","tiny")) list.wanted <- list(temperature=c("hot","cold","lukewarm") ,

Hello everybody I'm using contour() to draw streamlines of potential flow, eg jj <- seq(from= -4, to=4,len=20) jj <- outer(jj,jj,function(x,y){x})+1i*outer(jj,jj,function(x,y){y}) f <- function(x){x^2} contour(Im(f(jj)), nlevels=44 , labels="") How best to put arrows on the contour lines to show the direction of flow? (ie I want contour lines looking like

Hi how do I make my axes cross at the origin? x <- seq(from=-pi,to=pi,len=30) plot(x,sin(x)) makes the axes cross at about (-pi,-1). How do I get my x and y axes to cross in the centre of the graph, with the sine curve passing through the intersection? I couldn't find anything in ?par or ?axis; searching R-FAQ for "axis" didn't help. -- Robin Hankin Uncertainty

Hi I want to extract rows of a matrix, and preserve rownames even if only one row is selected. Toy example: R> a <- matrix(1:9,3,3) R> rownames(a) <- letters[1:3] R> colnames(a) <- LETTERS[1:3] R> a A B C a 1 4 7 b 2 5 8 c 3 6 9 Extract the first two rows: R> wanted <- 1:2 R> a[wanted,] A B C a 1 4 7 b 2 5 8 rownames come through fine. Now extract just

Hi again everyone I have an arbitrarily dimensional array "a" and a list "jj" of length length(dim(a)). The elements of jj are vectors of indexes. How do I use do.call() to extract a[ jj[[1]], jj[[2]], jj[[3]], ...] ? Toy example follows: a <- matrix(1:30,5,6) jj <- list(5:1,6:1) I want the following a[ jj[[1]],jj[[2]] ] How do I do this? OBAttempts:

https://bugzilla.samba.org/show_bug.cgi?id=10074 Summary: rsync reorders --from-files alphabetically Product: rsync Version: 3.0.6 Platform: All OS/Version: All Status: NEW Severity: enhancement Priority: P5 Component: core AssignedTo: wayned at samba.org ReportedBy: nicholas.man at

Hi I am writing a bunch of functions that take two, three or four arguments. These functions operate on vectors of the same length; but I want the function to behave sensibly if one or more arguments are scalars. "+" does this for two arguments: "+"(1:10,3) # interpreted as "+"(1:10,rep(3,10)) But my functions can take more arguments. Say f() takes three:

Professor Ripley thanks for this. Very much appreciated. The original subject line reflected my late-night conviction that the answer might involve passing a strange list to do.call(). Anyway, package magic is broken (only in R-devel, I might add) because I have a function called "%eq%". R-2.0.0 CMD check is stopping (I think) because it interprets the "%" as a

Hi I'm having difficulty following the advice in section 2.7 of R-exts. In one of my packages, there is a function called mobius(). I want to refer to it in the Rd file as the M??bius function, and to illustrate the M??bius inversion formula (just to be explicit: this is "Mobius" but with two dots over the second letter). R-exts section 2.7 gives \enc{J??reskog}{Joreskog}

Hi! On the cran "package source" page, to each package there are the "reference manual" in pdf format with a nice title page. I observed that during the R CMD check pkg a pkg-manual.div are generated in the pgk.Rcheck directory. But the nice title page are missing. During the package build and install no div files are produced. Which opitions I have to pass during the build

If I execute R CMD Rd2dvi foo.Rd I get messages of the form: Converting Rd files to LaTeX ... foo.Rd Creating dvi output from LaTeX ... Saving output to 'foo.dvi' ... cp: .Rd2dvi4366/Rd2.dvi: No such file or directory Done xdvi-xaw: Fatal error: foo.dvi: No such file. Indeed if I add the --no-clean flag and then cd to the .Rd2dvi<whatever> directory, I find that there is no

Hi, I''m writing my requirements in rspec, however, I can not figure out a way to execute all specs according to alphabetical order, not by last modified time. According to the documentation, it seems like the default is by alphabetical order, I just can not get that to work. In the unit tests with the rspec package, seems like only mtime was tested. Can anyone tell me how to run specs

Hi guys. Another thing I cannot vectorize: I have an array "a", of size 5-by-2, for example, of 5 2D vectors. I also have a distance function that computes the distance between two vectors (usual Euclidean distance is a good example but I have other metrics I want to use as well). I want a 5-by-5 array with the [i,j]th element being the distance from a[i,] to a[j,] To Wit: a

Hi everyone. I'm playing with aperm(): a <- 1:24 dim(a) <- c(2,3,2,2) permutation <- c(1,2,4,3) b <- aperm(a,permutation) So if my understanding is right, a[1,3,2,1] == b[c(1,3,2,1)[permutation] ] but this isn't what I want because the RHS evaluates to a vector, and I am trying to identify a single element of b. How do I modify the RHS to give what I want? Following