similar to: duplicate row importing issue

Hello, I'm new to R, and I'm having trouble importing a text file (I'm on Windows XP) > m <- read.table("/Desktop/work/128_L") Error in file(file, "r") : unable to open connection In addition: Warning message: cannot open file `/Desktop/work/128_L' do you know why this isn't working? All I have is a bunch of text files, each with a

Hello, I'm trying to do a cluster analysis on a large data set. I tried it out with a smaller one first, but I got this error: > hc<-hclust(dist(x),"ave") Error: cannot allocate vector of size 4129151 Kb The data sample used (i.e. "x") is a numerical data set of size 32513 by 31 Does anyone know how I can do this analysis? Is R capable of this

Hello, If I have a four column data set (with thousands of rows), that doesn't have a header, how do I load in this text file, WITHOUT a row added for naming(i.e. numbering the rows, 1 2 3 4 5......). Also, if a row is added for naming, then will it be actually included in the data? That is, will that numbered row be included in analysis I run? (like PCA) Thanks!

Hello, I'm attempting to run a PCA on an example data set. I ran it just fine, but I don't know how to few the output? I listed what the variable got stored in it, but I don't know how I can get anything else out of it. Are there other ways to view the results? Also, I'm confused about the last line "6 variables and 8 observations" Aren't the rows the

I want to run deconvolution of a time series by an impulse or point-spread function through Wiener filter, regularized filter, Lucy-Richardson method, or any other approaches. I searched the CRAN website and the mailing list archive, but could not find any package for such a deconvolution analysis. Does anybody know an existing R function for deconvolution? TIA, Gang

Hi I am struggling with nested random effects and hope someone can help. I have individuals (ID) who are nested within families (FAM). I want to model an outcome variable, and take account of the intercorrelation of individuals within each family. I think this amounts to two random effects, one nested within the other. How can I model this in R? So far I have tried using the

I have several newbie questions - any help much appreciated: 1. I run a combination Windows 98 and XP home network - have been looking at Linux on two boxes at home - one desktop - one laptop - RH 7.3 2 I can get samba to run okay and in each of the two Win98SE machines can see them as localhost 3. I cannot access any resources on the Linux machines - Win98 asks for a password - \\localhost\IPC$

Hi, Suppose I have a multidimensional array: tmp <- array(1:8, c(2,2,2)) is there a function out there that, given a one-dimensional array index, will return the separate indices for each array dimension? for instance, tmp[8] is equivalent to tmp[2,2,2]. I'd like to derive the vector (2,2,2) from the index 8. thanks, Brad Buchsbaum

The following commands illustrate a problem with graphing relatively large data sets using the "line" option to plot: temp <- runif(200000) # or whatever other numbers you like; # same thing happens with a sine wave plot(1:200000, temp) # everything fine plot(1:200000, temp, type="l") # data gets cut off The number of points isn't crucial. The cutoff point

Hello All First - a warning. I'm not very R or programming savvy. I am trying to do something without much luck, and have scoured help-pages, but nothing has come up. Here it is: I have a matrix (m) of approx 40,000 rows and 3 columns, filled with numbers. I would like to convert the contents of this matrix into another matrix (m_p), where the numbers of (m) have been coerced into a

hello, I'm trying to use R to take an image matrix and paint it into a tcltk canvas. I'm using R-1.9.0 within ess-5.2.0 on a linux machine running the 2.4.30-31.9smp kernel. I'm using the ActiveTcl8.4.6.1-linux-ix86 tcltk libraries. When I run the following comands, however, I get an R segmentation fault: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Hello, all. I've got what is probably a simple question about comparison of models using anova, specifically about the situations in which it's valid. I understand, I think, what's going on when the models are strictly nested (as most are in the demo(lm) examples). My question involves what happens when the models aren't strictly nested. In my particular case, I'm doing

Below is the output. Thanks for the help. > Sys.getenv() BASH_FUNC_module() () { eval `/cm/local/apps/environment-modules/3.2.10/Modules/$MODULE_VERSION/bin/modulecmd bash $*` } COLUMNS 152 CPATH /cm/shared/apps/uge/8.2.1/include CVS_RSH ssh DISPLAY localhost:10.0 EDITOR

Hi, all. Using the patched version of R-0.99.0, I cannot reproduce the following example from the strsplit documentation: (Example) unlist(strsplit("a.b.c", ".")) ## [1] "" "" "" "" "" ## Note that `split' is a regexp! ## If you really want to split on `.', use unlist(strsplit("a.b.c", "\."))

Hi, all. The lower bound in a barplot (or the left bound if you're making a horizontal barplot) is -0.01 no matter what. This causes problems if you're making a barplot of small values (say, < .001), as most of the plot is taken up with blank space beneath the axis, and the bars are squeezed in at the top. The fix seems to be simple: replace lines 41: xlim <- range(-0.01,

Hi, all. Does anyone have an equivalent to Splus "peaks", which finds local maxima (with locality defined by a parameter "span")? I thought I'd check whether anyone has done it already before trying to put something together myself. Thanks, Matt Wiener -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read

Two more details: Someone else who works here, and hasn't used 0.65.0, thinks he's seen the error before. He restarted R, and it went away. Second, I think the relevant code is in SEXP do_function, in eval.c in the main directory. line 695: WrongArgCount("lambda") Beyond that I'm afraid I'm getting in over my head. Matt

Hi. I'm having a problem with disappearing comments when I transfer files (entire .RData files) from one machine to another, and I'm not sure whether it's an R problem or an ESS problem. Since ESS seems more likely, I'm trying this list first. (However, it seems to me this problem only showed up when I upgraded to R-0.65.0 or R-0.65.1.) Functions originally shows up fine -- if

Could somebody advise me about importing a txt file as a frame? I am using the command: test <- read.delim ("~/docs/perl/expr_ctx.txt2", header=T, sep = "\t", row.names = 1) This gives me an error because there are duplicate rows. In the txt file, the columns are unique subjects and the rows are variables, so I had planned to transform the file after importing. The first

Full_Name: Matthew Wiener Version: 1.1.1 OS: linux Submission from: (NULL) (156.40.248.102) I've come across a glitch in hist. I can reproduce it on linux for Intel, linux for PPC, and Irix 6.5. t1 <- c(41, 42, 42, 43, 43, 43, 44, 44, 45, 46) hist(t1, breaks = 10) (OK) hist(t1/50, breaks = 10) Error in hist.defauilt(t1/50, breaks = 10): some 'x' not counted; maybe