Displaying 20 results from an estimated 600 matches similar to: "Re: R equivalent of Splus rowVars function"
2006 Mar 31
2
rowVars
I am using the R 2.2.1 in a Windows XP environment.
I have a dataframe with 12 columns and 1,000 rows.
(Some of the rows have 1 or fewer values.)
I am trying to use rowVars to calculate the variance
of each row.
I am getting the following message:
?Error in na.remove.default(x) : length of 'dimnames'
[1] not equal to array extent?
Is there a good work-around?
2002 Aug 14
3
t-test via matrix operations
I need to calculate a large number of t statistics, and would like to do so via matrix operations. So far I have figured out a way to calculate the mean of each row of the matrix:
d <- matrix(runif(100000,1,10), 1000, 10) # some test data
s <- rep(1,ncol(d)) # a sum vector to use for matrix multiplication
means <- (d%*%s)/ncol(d)
This is at least 1 order of magnitude faster than
2002 Nov 15
2
Why no colSDs etc
Hi people,
If there is a fn "colMeans" why isn't there a "colSDs" etc
Thanks,
Phil.
--
Philip Rhoades
Pricom Pty Limited (ACN 003 252 275)
GPO Box 3411
Sydney NSW 2001
Australia
Mobile: +61:0411-185-652
Fax: +61:2:8923-5363
E-mail: pri at chu.com.au
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2002 Jan 07
0
New package: colSums
I've uploaded a package colSums_1.0.tar.gz to CRAN /src/contrib/Devel. It
contains functions colSums, colMeans, colVars, colStdevs, rowSums, rowMeans,
rowVars, and rowStdevs. These do simple, fast arithmetic on columns/rows of a
matrix, or more generally across dimensions of an array, e.g. colSums(m) =
apply(m, 2, sum) but faster. They should be compatible with the corresponding
S-Plus
2002 Mar 17
5
compute variance of every column in a matrix without a loop
Is it possible to compute the variance of every column in a matrix
without a loop?
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2008 Jan 24
0
deprecate "freq" argument to hist
I request that the "freq" argument to hist be deprecated.
Reason:
One nice thing about SAS is is the consistency of certain inputs
across many PROCs. In particular, they have "weight" and "freq"
statements.
We have added "weights" and "freq" to a number of functions in S-PLUS,
listed below. I would like to see the same in R.
In porting the
2003 Jul 27
1
oggenc questions
Hello everybody!
Some questions concerning oggenc:
1 why is it called oggenc? (vorbisenc would make more sense)
2 Is it true, that oggenc uses only some predefined codebooks (depending on -q)?
2.1 Are they just "random" books, or were they "optimized" in any way
2.2 Is it possible, that some codebooks are stored in the header, but are never used (even in long (>3min) files)?
2007 Mar 09
1
lpSolve space problem in R 2.4.1 on Windows XP
Hi.
I am trying to use the linear optimizer from package lpSolve in R 2.4.1 on
Windows XP (Version 5.1). The problem I am trying to solve has 2843
variables (2841 integer, 2 continuous) and 8524 constraints, and I have 2 Gb
of memory. After I load the input data into R, I have at most 1.5 Gb of
memory available. If I start the lp with significantly less memory
available (say 1 Gb), I get
2007 Jul 12
1
sub-function default arguments
Hi.
I have defined a function, f1, that calls another function, f2. Inside f1
an intermediate variable called nm1 is created; it is a matrix. f2 takes a
matrix argument, and I defined f2 (schematically) as follows:
f2<-function(nmArg1=nm1,...){nC<-ncol(nmArg1); ... }
so that it expects nm1 as the default value of its argument. f1 is defined
(schematically) as:
2009 Sep 20
4
correlation help
Dear group,
I have a matrix like the following:
Name Sample1 sample2 sample3 sample4 ..... sample(n)
nm1 10.5 13.5 30 31
nm2 8 11 34 29
nm3 9 10.3 27.8 35
nm(j)
I want to be able to calculate correlation between all pairs of names.
For example (nm1,nm2),
2009 Mar 13
2
Taking diff of character vectors
Hello, everybody
Say I have
nm1 <- c(rep(1,10), rep(0,10))
then I can do:
diff(nm1)
to see where I have shift in value
but what if I have
nm2 <- c(rep("SPZ8", 10), rep("SPX9", 10))
how can I produce the same ouput as diff(nm1) does, that is zeros
everywhere except for one place where SPZ8 changes to SPX9 (there
should be 1 there)?
What if I have a matrix of characters
2016 Dec 27
0
colnames for data.frame could be greatly improved
Hi there,
Any update on this?
Should I create bugzilla ticket and submit patch?
Regards
Jan Gorecki
On 20 December 2016 at 01:27, Jan Gorecki <J.Gorecki at wit.edu.pl> wrote:
> Hello,
>
> colnames seems to be not optimized well for data.frame. It escapes
> processing for data.frame in
>
> if (is.data.frame(x) && do.NULL)
> return(names(x))
>
> but
2016 Dec 20
2
colnames for data.frame could be greatly improved
Hello,
colnames seems to be not optimized well for data.frame. It escapes
processing for data.frame in
if (is.data.frame(x) && do.NULL)
return(names(x))
but only when do.NULL true. This makes huge difference when do.NULL
false. Minimal edit to `colnames`:
if (is.data.frame(x)) {
nm <- names(x)
if (do.NULL || !is.null(nm))
return(nm)
else
2010 Jun 18
1
ffmpeg2theora 0.27 released
ffmpeg2theora 0.27 - "Works with FFmpeg 0.6"
http://v2v.cc/~j/ffmpeg2theora
Some changes that went into this release:
* Use Skeleton 4.0 by default (including index),
can be disabled with --skeleton-3 or --no-skeleton
* update to FFmpeg 0.6 branch
* use ogv/oga/ogx depending on input if no output name is specified
* aspect ratio fix in twopass mode
* update documentation
2017 Feb 22
0
Crash in the latest release
I found this by accident yesterday. The program that crashes is the first two lines of
the example from the help page for nlmer. That example hasn't changed in a long time, so I
assumed that it is an R-devel issue. It could also be a long latent nlmer bug. The second
run with valgrind is puzzling.
Terry T.
> library(lmer)
> sessionInfo()
R Under development (unstable)
2017 Feb 22
0
[Lme4-authors] Crash in the latest release
Thanks, posted to https://github.com/lme4/lme4/issues/412 for further
discussion ...
On Wed, Feb 22, 2017 at 10:03 AM, Therneau, Terry M., Ph.D.
<therneau at mayo.edu> wrote:
> I found this by accident yesterday. The program that crashes is the first
> two lines of the example from the help page for nlmer. That example hasn't
> changed in a long time, so I assumed that it is
2015 Jan 16
1
S3 generic method dispatch on promises
Dear R friends
I wanted a function to make a simple percent table that would be easy for
students to use. The goal originally was to have a simple thing people
would call like this
pctable(rowvar, colvar, data)
and the things "rowvar" and "colvar" might be names of variables in data. I
wanted to avoid the usage of "with" (as we now see in the table help).
Then
2005 Jul 24
1
Buglet in src/appl/splines.c (PR#8030)
--AZaLVt6Pw+
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Dear all,
I was looking at "splinefun" and the underlying C code and believe
that there is a memory access error in the C routine "spline_eval".
Specifically, on line 368 and following the following code appears:
if(ul < x[i] || x[i+1] < ul)
2023 Aug 19
1
Determining Starting Values for Model Parameters in Nonlinear Regression
Thank you so much Dr. Nash, I truly appreciate your kind and valuable
contribution.
Cheers,
Paul
El El s?b, 19 de ago. de 2023 a la(s) 3:35 p. m., J C Nash <
profjcnash at gmail.com> escribi?:
> Why bother. nlsr can find a solution from very crude start.
>
> Mixture <- c(17, 14, 5, 1, 11, 2, 16, 7, 19, 23, 20, 6, 13, 21, 3, 18, 15,
> 26, 8, 22)
> x1 <- c(69.98, 72.5,
2011 Oct 17
1
plotting issues with PCA
Hi Listers,
This has a simple answer but it has been eluding me nonetheless.
I have been building a PCA plot from scratch with the ability to plot
predefined groups in different colors. This has worked fine but when I try
to get a polygon drawn around each of the groups it is not recognising my
colour file correctly and is only printing the first colour in the
file....code is below