similar to: Histogram

Dear all, I need to read an ASCII file with diffent length lines. This is what is contained in the file gene.txt: 1st line ID description snp_id genotype 2nd line 10003 Low rs152240 3rd line 10003 Moderate rs189011 TC 4th line 10004 Conservative rs152240 GC 5th line 10004 Bad rs154354 6th line 10013 Bad rs152240 7th line 10019 Conservative rs152240 AC etc... This is what I would like to obtain

Dear all, is there a automatic method to obtain Odds Ratio estimates and their confidence intervals from a GLM Logistic model? Thanks Cristian ============================================= Cristian Pattaro ============================================= Unit of Epidemiology & Medical Statistics Department of Medicines and Public Health University of Verona cristian@biometria.univr.it

Dear all, I'm using the package "Genetics", and I'm interested in the computation of D' statistics for Linkage Disequilibrium, for which the LD() command has been realised. Unfortunately I don't find any reference on "how" the D' is computed by the LD() function. In the package documentation it is generally referred as "MLE" estimation, but

Hi! How can I fill with colors a portion of a graph (e.g.: I want fill in red the area within two confidence intervals)? Thank you very much Cristian ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Cristian Pattaro ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Unit of Epidemiology & Medical Statistics University of Verona Tel +39 045 8027668 fax +39 045 505357 cristian at biometria.univr.it

Hi! After installing R 2.0.0, I have problem with the "help.search" as below: > help.search("table") Error in help.search("table") : could not find package 'file23525' > help.search("mean") Error in help.search("mean") : could not find package 'file23525' I have had the same problem with other request... What is

Hi Cristian, I don't know about a R routine for exact CIs, but I found a function called "ageadjust" using a gamma distribution approximation some time ago -take a look at http://medepi.org/epitools/rfunctions/index.html. That Webpage seems a bit outdated now, but the calculations given in the ageadjust functions should still work, I think. Maybe this helps; regards Heinrich.

Hello, I have a strange problem affecting samba-3.0.10-1.4E.12.2 on a Red Hat Enterprise Linux AS release 4 system. We have a multi-domain configuration here at University of Verona (Italy). We use Samba as PDC for several faculties. Each faculty has its own daemon instance and its own smb config file: [root@ldapvr1 ~]# ls /etc/samba/smb.* /etc/samba/smb.conf

Hi all! Do you know if there is any R function/package that can be used to estimate "logit" models with panel data and forecasting? Thanks, Moysés. -- Moysés Nascimento Bacharel em Estatística/UFES Mestre em Estatística Aplicada e Biometria/UFV Doutorando em Estatística e Experimentação Agropecuária/UFLA moysesnascim@gmail.com [[alternative HTML version deleted]]

Dear all, I'm working with R 1.2.2 on win98 (256Mb RAM) with ESS 5.1.18. It happens that the start-up is very slow. I don't know exactly how to measure, but with a simple watch I recorded 15 seconds, while the startup of S+ 2000 (Sqpe+4 under ESS) takes around 3 seconds. Tha fact is that sometimes it takes almost a minute (58.30 sec recorded) for the prompt to appear! And ESS gives me an

Dear R users, I would like to employ count data as covariates while fitting a logistic regression model. My question is: do I violate any assumption of the logistic (and, more in general, of the generalized linear) models by employing count, non-negative integer variables as independent variables? I found a lot of references in the literature regarding hot to use count data as outcome,

I rebuilt a test version of my yaImpute package using Uwe Ligges' windows build service. I got this reply: Check result: OK R version 2.9.0 Under development (unstable) (2009-01-27 r47756) Here is the issue: I have the following construct in help files (this example relates to "data"): \format{ A data frame with 847 rows and 29 columns: \cr\cr Ground based measurements of

Hi all, I have a rather naive question. I have the height of 100 individuals in a table and I want to assign the tallest 30% as Case=1 and the bottom 30% as Case=0. How do I do that? thanks. jiong The email message (and any attachments) is for the sole use of the intended recipient(s) and may contain confidential information. Any unauthorized review, use, disclosure or distribution is

Is it possible to regenerate the index files, on other conditions than the mbox file being read? For instance, it would be nice if I could regenerate the index for a specific mbox whenever procmail delivers mail to it. If theres no existing solution, would it be possible to make a small script with something like "nc" that could send an imap command to dovecot, so that dovecot would

Hello, The function barplot automatically creates a y-axis that doesn't necessarily cover the range of y-values to be plotted. I know how to manually create my own y-axis so that it does cover the range, but I was wondering if there is some parameter to change so that the scale of the y-axis is automatically taller than the tallest bar. I thought setting xpd=F would do it, since it says that

I'm looking for a spec/rpm file suitable for fedora 11/12, for dovecot and pidgenhole sieve. Has anyone done this yet? Otherwise I will attempt to the dovecot 1.2 spec files for f11. -- Joakim Verona

Hello, Due to a misstake I got many duplicate emails in my inbox folder. They are stored in maildir format, so my initial thought was do simply md5sum the mail files and remove the duplicates. This doesnt work because the mails has differinf uids. Any other hints? -- Joakim Verona

Dear R users, I am trying to fit a Cox model such as: Surv(time,event) ~ X1+X1:X2 or Surv(time,event) ~ X1*X2 -X2, This code is working with coxph but not with cph (nor with psm), and the error message is: Error in if (!length(fname) || !any(fname == zname)) { : missing value where TRUE/FALSE is required Any idea about the cause of the problem and how to manage it within the Design

I've developed a web application in PHP and R my script is <?php ... exec("R CMD BATCH --silent /home/marcello/R_in/myfile.bat /home/marcello/R_out/myfile.out"); ... ?> This script execute in R batch mode and write the myfile.out. On Win2000 the similar script is ok, but on linux I've a problem. I suppose is a permession problem because the same script on shell

I've a problem with a program. Printing system does: type test.txt *>>* \\lnxsrv\printer and it return: "the parameter is incorrect" but if i try: type test.txt *> *\\lnxsrv\printer it works but if i try with early samba before 3.0.21 release "open extend >> " works ! with last samba release 3.0.25 not work and it tell me error ! Only simple >

On Wed, 9 Sep 2020 at 18:15, Min-Yih Hsu via llvm-dev < llvm-dev at lists.llvm.org> wrote: > David mentioned in D87337 that LLVM has used similar techniques on code > size (not sure what he was referencing, my guess will be something related > to hot-cold code splitting). > IIUC, it's just using optsize instead of optnone. The idea is that, if the code really doesn't