similar to: installing RMySQL

Hi, I installed SJava 0.66-1 on my linux RH 7.2 machine. I am using R-1.7.1. I set LD_LIBRARY_PATH up then called library(SJava) and it was fine. But when I called .JavaInit(), I got weird error that states it could not find java/lang/Hashtable. The session is below and shows my java configuration. I am using j2sdk1.4.2_01 from Sun. Thank you very much. Weiming Zhang > .javaConfig

Running under Redhat 7.3 Linux I have installed R Version 1.8.0 (2003-10-08) from a binary download using the rpm manager. Using packageStatus(), I am attempted to upgrade several packages. This is unsuccessful with the following error messages: * Installing *source* package 'MASS' ... ** libs gcc -I/usr/lib/R/include -I/usr/local/include -D__NO_MATH_INLINES -mieee-fp -fPIC -O2

I have upgraded R on my Linux box from 1.5.1 to 1.6.1 using the binary distributions for redhat 7.x. My machine is runing: Linux 2.4.18-3 Red Hat Linux release 7.3 (Valhalla) After upgrading R, I executed upgrade.packages() During the upgrading of the different packages there was an error on RMySQL. Here is a dump of the upgrading messages:

Hi, I am building R on RH Linux 7.3 and I noticed that ./configure does not set the optimization flag, -O or -O2, for gcc, but does set for g++ and g77. Why is that? Should I try to set it manually, if yes how? Thanks, Vadim P.S. This is the bottom portion of the ./configure run R is now configured for i686-pc-linux-gnu Source directory: . Installation directory:

Howdy, When doing a install.packages("ROracle") in R I'm getting the following error: R CMD COMPILE RS-DBI.c make[1]: Entering directory `/tmp/R.INSTALL.1809/ROracle/src' gcc -I/usr/lib/R/include -I/usr/local/include -D__NO_MATH_INLINES -mieee-fp -fPIC -O2 -m486 -fno-strength-reduce -g -c RS-DBI.c -o RS-DBI.o make[1]: Leaving directory `/tmp/R.INSTALL.1809/ROracle/src'

Hey all, I asked my server administrator to install the RMySQL package for me however he was unable to and received the below errors. I searched the archives for some of the words in the error mesage but found no answers. Does anyone have any ideas what might be going wrong? This is R 1.6.2 on a linux box. Thanks, Fred > install.packages("RMySQL") trying URL

Hi, I have struggled to re-implement the RMySQL package after upgrading from SuSe 6.3 to 7.2 and from R 1.2.1 to R 1.3.1, to no avail It compiles happily but when loading the package I get the following error > library(RMySQL) Error in dyn.load(x, as.logical(local), as.logical(now)) : unable to load shared library "/home/jniesch/R_HOME/lib/R/library/RMySQL/libs/RMySQL.so":

Hi! I am trying to install the RMySQL package. The installation stops with the following error message. path to mysql is set. setenv PKG_CPPFLAGS /home/arabidopsis/software/R1.9.1/linux/mysql/include setenv PKG_LIBS /home/arabidopsis/software/R1.9.1/linux/mysql/lib R CMD INSTALL RMySQL_0.5-5.tar.gz #....cut cut. creating src/Makevars ** libs gcc

Hi, i try to install, but getting no success. What this mean cannot find -lz , any necessary lib left in my SuSE Installation? Many thanks, Christian linux:/usr/lib/R/bin # R CMD INSTALL RMySQL_0.5-2.tar.gz * Installing *source* package 'RMySQL' ... creating cache ./config.cache checking how to run the C preprocessor... cc -E checking for mysql_init in -lmysqlclient... yes checking

Hi there, Installation error was given when I tried to install pmg (Poor mans GUI) http://wiener.math.csi.cuny.edu/pmg/index.html. $ LANG=C sudo R CMD INSTALL pmg_0.6.tar.gz * Installing *source* package 'gtkpmg' ... ** R ** save image Error in library(OOP) : There is no package called 'OOP' Execution halted /usr/lib/R/bin/INSTALL: line -116: 20554 Broken pipe cat

I just installed 1.0 (great job, everyone!) and rebuilt all my packages. I have found an error in making VR_6.1-6.tar.gz: Installing package `MASS' ... libs gcc -I/usr/lib/R/include -mieee-fp -fPIC -O2 -m486 -fno-strength-reduce -g -c MASS.c -o MASS.o MASS.c:631: Arith.h: No such file or directory make: *** [MASS.o] Error 1 The file /usr/lib/R/include/Arith.h used to be there (locate

Oracle is finally up and running on RH 7.3 now. I will try to summarize the pitfalls to avoid here for future reference. 1> Make sure you have the Pro C/C++ drivers in Oracle client installed. This can be verified by looking for the existence of the proc directory in $ORACLE_HOME. Existence of proc means it worked 2> Put the following in the .bashrc script in root export

Hello, After reinstalling the whole OS and R as well, I tried to update.packages() and get the follwing error message: concerning the mgcv update: atlas2-base is installed and blas as well (on debian). I haven't found lf77blas, I assume it's a library or something similar associated with blas. any suggestion how to solve that, thanks Martin * Installing *source* package

Hi All, I am having trouble installing the sm package, and only the sm package. My box is RedHat 7.3 on a PIV. Readline 4.3-3 is installed (suited for RH 8, but same error under readline 4.2 for RH 7.3), but it seems to be looking for the readline library in the wrong directory. Will installing readline 4.1 do the trick? What else could be done? Rohan Sadler [root at rsadler R]# R CMD

Hi all, I'm very new to R. I have installed R 1.9.0 on Linux (Fedora). Now I got an self-made package comprising R functions as well as C-Code which are used in several R functions. I installed the package without any error (see install log below). Then, I checked in /usr/lib/R/library if the package izbi exists and it exists. But whenever I try to load the library on the command line I

Updating my 1.8.0 R installation (>update.packages() ) I obtain the following (SORRY FOR THE LENGTH OF THE LOG BUT IT HELPS!!!): ................ downloaded 135Kb KernSmooth : Version 2.22-11 in /usr/lib/R/library Version 2.22-12 on CRAN Update (y/N)? y mgcv : Version 0.9-3.1 in /usr/lib/R/library Version 0.9-6 on CRAN Update (y/N)? y trying URL

Building vorbis-tools out of today's CVS (Jan 30) on Linux/i386 has a few problems. 1) Building oggenc: gcc -DPACKAGE=\"vorbis-tools\" -DVERSION=\"1.0prebeta4\" -I. -I. -pipe -O2 -m486 -fno-strength-reduce -c platform.c platform.c:55: warning: garbage at end of `#ifdef' argument 2) Building ogg123: gcc -DPACKAGE=\"vorbis-tools\"

Hello, I have upgraded from Mandrake Linux 8.0 to Mandrake 8.1 and try to reinstall my favourite R... Everything is OK for the base software but I have trouble to get some packages installed. Specifically, for some packages, a "collect2" binary seems to be necessary during the compilation/linking process of the library, and LD complains about not finding it : Installing source

Hi all, I'm looking for a way to install the RMySQL-package into my Windows-version of R (1.8.1). I did successfully install this package into my Linux-version of R (RedHat9), but now I want to do this in my Windows-version too. How to? Regards, Maarten -------------------------------------------------------------- Zie ook/see also: http://www.knmi.nl/maildisclaimer.html

Hello, Here is a problem I have had trying to install locfit, the package for R. I have already contacted Clive Loader who thinks the problem has more to do with R than locfit, so here is the point : The version of R I am currently running is R-base-0.90 that I installed using the R-base-0.90.1-1.i386.rpm package. I dowloaded the locfit package available at the CRAN site and ran : R INSTALL