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Dear R-help As a novice to R I was seeking some advice with respect to using R to help solve a problem I have. I have a large number of infiles that need analysed. This can be done, I believe, using 2 separate R packages (popgen and ape) with the output from 'popgen' being used as input for 'ape'. What I would like to know is whether it is possible within R to write some

Hi!! This is my first time with llvm. I'm still learning and really need help. I wrote only one Function Pass, which uses another Function Pass (blockNrs), and registered this: RegisterPass<FunctionAnalysis> X("gasched", "Genom Scheduling Pass"); When I compile my sourcecode, everything was okay. But when I tried to test it, i got this error Message: nicole at

Hi I would like to eliminate a large number of lines of the dataframe df1 The lines to delete are given here by the values of Mat (ex : 2,4,7,10). but I have a large number (300) values of Mat dput(df1) structure(list(Mat = c(1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 3, 3, 3, 3, 3, 4, 4, 4, 4, 4, 5, 5, 5, 5, 5, 5, 6, 6, 6, 6, 6, 6, 7, 7, 7, 7, 7, 7, 7, 8, 8, 8, 8, 8, 8, 8, 9, 9, 9, 9, 9, 9, 10, 10, 10, 11,

Hello, I'm in need of running a PVA and want to load {popbio}. However, I can't find it. I can't see where or how to load it. I have added repositories and changed the CRAN mirror site. I see {polynom} and {popgen} but no {popbio} between. What am I doing wrong? Thanks, Michelle [[alternative HTML version deleted]]

Hi!! It's me again. I guess that there is a problem in the Makefile of my source code. But I don't know where. Could you please verify it? The Makefile is written like this: # Makefile for Genetic Algorithm Pass CXXFLAGS = -Wall -I/iss/fpga3/nicole/galib247/ LDFLAGS= -L/iss/fpga3/nicole/galib247/ga/ -lga -Wl,-E # Path to top level of LLVM heirarchy LEVEL=../../../ # Name of the

I have what I hope is a simple question - is it possible to do time series analysis on a small data set specifically only four data points? I have collected human threat data (mean number of threats per kilometre walked/ survey) every 3 months in eight different sites (four with an experimental element and four control sites). I am trying to determine the best way to determine if there is a

To detect heteroscedasticity for a multiple linear OLS regression (no time dependencies): What if the residuals vs. fitted values plot shows well behaved residuals (cloud) - but the some of the x versus residuals plots are a megaphone? Also, it seems that textbooks and internet tutorials in R do not agree what is the best plot for detecting heteroscedasticity. What do you use? I found so

Hello, I have a very simple data set i imported from excel including 96 averages in a column along with 96 standard errors associated with those averages (calculated in excel). I plotted the 95 averages using r and I am wondering if it is possible to plot the second column of standard errors while applying error bars to each value so they represent the error corresponding to each average? thanks,

Hi!! This is my first time with llvm. I'm still learning and really need help. I wrote only one Function Pass, which uses another Function Pass (blockNrs), and registered this: RegisterPass<FunctionAnalysis> X("gasched", "Genom Scheduling Pass"); When I compile my sourcecode, everything was okay. But when I tried to test it, i got this error Message: nicole at

Hello everybody, I'm trying to install rJava to use JRI in a Java program as JRI is a part of rJava. There should be the option to install this package via install.packages("rJava"). Unfortunately I'm connected to the internet via a proxy. I have no idea how to tell R to connect via the proxy. The R-help tells me something about environment variables like "http_proxy".

What is the exact formula used in R lm() for the Adjusted R-squared? How can I interpret it? There seem to exist several formula's to calculate Adjusted R-squared. Wherry’s formula [1-(1-R2)·(n-1)/(n-v)] McNemar’s formula [1-(1-R2)·(n-1)/(n-v-1)] Lord’s formula [1-(1-R2)(n+v-1)/(n-v-1)] Stein 1-(n-1/n-k-1)(n-2)/n-k-2) (n+1/n) Theil's formula (found here:

Hello, I'm doing a comparative analysis of mammal brain and body size data. I'm following Charlie Nunn and Natalie Cooper's instructions for "Running PGLS in R using caper". I run into the following error when I create my comparative dataset, combining my phylogenetic tree (mammaltree) and taxon measures (mammaldata): "Error in phy$node.label[which(newNb > 0) -

Hello, I am trying to run R on my Mac (OS10.5.6) and am having trouble installing and running packages (genefilter in particular in Bioconductor) I've tried re-installing R and it hasn't solved the issue. Thanks, ~Nicole Slusher

Dear r-helpers, I downloaded http://popgen.unimaas.nl/~jlindsey/rcode/rmutil.tar (it was originally .tgz, but got unzipped by my browser). Can anyone give me detailed instructions on installing this and Lindsey's other packages on R version 2.4.0 (2006-10-03)---(powerpc- apple-darwin8.7.0, locale: C)? _____________________________ Professor Michael Kubovy University of Virginia

Hi, I''m running SLES10 SP1 with xen 3.0.4 and windows 2003 server as guest. Is it possible to assign ips from different networks to Dom0 and Guest, e. g. 172.27.10.1/24 for Dom0 and 172.27.15.1/24 for Guest? I tried it, but I can''t reach the Guest. If it''s possible, what should I have to configure? Thanks! Nicole _______________________________________________

Hello. I am trying to pull out one country from a time series of 5 waves. For example I need Norway from the 5th wave. This is new to me. Typically, I work with country specific surveys. data = norway I have attached a .tiff of the codebook showing the variable names for Norway and the wave. They appear to be Norway = v218 and wave = v15. But perhaps I am wrong and this is part of the

Hi, I'm trying to build several SCL perl516 modules for using assp spamfilter. Some modules have dependencies which spend a lot of errors or can not be build on a x86_64 system. perl-Email-Valid-0.184 for example needs Win32::IPHelper and Win32::TieRegistry. If I build this rpm for standard perl510, the Win32 modules are not required. Why are theses dependencies only for perl516? Can I

Hello, I have a dataset which I am calling RB09. I am trying to match the questions in the code book with variable codes. It is not very intuitive. example: names(RB09) [1] "ea1" "eaf1" "eaf1a" "eaf2" "eaf2_7" [6] "eaf3" "eafimpun" "eafunpun" "evimpmar"

Hello, I am VERY new to R (one week) and I am trying to run a multinomial logit model. The model I am using is > model1 <- multinom(Y ~ X1 + X2 + , ..., Xn) if I put in > summary(model1) I get #Error in function (classes, fdef, mtable) : unable to find an inherited method for function "fitted", for signature "multinom" and if I put in > coef(model1)

Dear all, I'm studing how to include .c code in my .r functions . In the R-exts.pdf manual I have found the following code. At one point the author write "called from R by"... How can I load a .c file on R? ( I am using a xp windows as so.) Thank you ale void convolve(double *a, int *na, double *b, int *nb, double *ab) { int i, j, nab = *na + *nb - 1; for(i = 0; i < nab; i++)