Displaying 20 results from an estimated 2000 matches similar to: "Error in f(x, ...) : subscript out of bounds"
2012 Mar 22
2
Quicker way to apply values to a function
Hi all,
myint=function(mu,sigma){
integrate(function(x) dnorm(x,mu,sigma)/(1+exp(-x)),-Inf,Inf)$value
}
mymu=seq(-3,3,length(1000))
mysigma=seq(0,1,length(500))[-1]
k=1
v=c()
for (j in 1:length(mymu)) {
for (i in 1:length(mysigma)) {
v[k]=myint(mymu[j],mysigma[i])
k=k+1
}
}
Basically, I want to investigate for what values of mu and sigma, the
integral is divergent.
Is there another way
2006 Jul 25
1
HELP with NLME
Hi,
I was very much hoping someone could help me with the following.
I am trying to convert some SAS NLMIXED code to NLME in R (v.2.1),
but I get an error message. Does anyone have any suggestions?
I think my error is with the random effect "u" which seems to be
parametrized differently in the SAS code. In case it's helpful,
what I am essentially trying to do is estimate parameters
2017 Aug 16
1
Bias-corrected percentile confidence intervals
Hi folks,
I'm trying to estimate bias-corrected percentile (BCP) confidence
intervals on a vector from a simple for loop used for resampling. I am
attempting to follow steps in Manly, B. 1998. Randomization, bootstrap
and monte carlo methods in biology. 2nd edition., p. 48. PDF of the
approach/steps should be available here:
https://wyocoopunit.box.com/s/9vm4vgmbx5h7um809bvg6u7wr392v6i9
If
2005 Mar 09
1
Trouble with mixreg
Dear All
I am trying to estimate a mixture of regression and get the
following error using the mixreg package:
Error in y - yhat : non-conformable arrays
The instruction I used were:
x <- as.matrix(LRHUN)
y <- as.matrix(LRINTER)
TS <- list(list(beta=c(3.0,1.0),sigsq=1,lambda=0.4),
list(beta=c(0.0,1.0),sigsq=1,lambda=0.6))
prova <- mixreg(x,y, ncomp=2, theta.start=TS)
2006 Sep 12
4
variables in object names
Is there any way to put an argument into an object name. For example,
say I have 5 objects, model1, model2, model3, model4 and model5.
I would like to make a vector of the r.squares from each model by code
such as this:
rsq <- summary(model1)$r.squared
for(i in 2:5){
rsq <- c(rsq, summary(model%i%)$r.squared)
}
So I assign the first value to rsq then cycle through models 2 through
2010 Jun 29
1
Model validation and penalization with rms package
I?ve been using Frank Harrell?s rms package to do bootstrap model
validation. Is it the case that the optimum penalization may still
give a model which is substantially overfitted?
I calculated corrected R^2, optimism in R^2, and corrected slope for
various penalties for a simple example:
x1 <- rnorm(45)
x2 <- rnorm(45)
x3 <- rnorm(45)
y <- x1 + 2*x2 + rnorm(45,0,3)
ols0 <- ols(y
2010 Apr 29
1
R CMD check Error after R CMD build for R-2.11.0
Dear UseR,
I get an error when I run "R CMD check" on my .tar.gz file package,
and I don't understand why since I don't obtain any error with "R CMD
check" on the package directory. Do you have any idea ?
$ sudo ./R-2.11.0/bin/R CMD check eqtl_1.1.tar.gz
and
$ sudo ./R-2.11.0/bin/R CMD --check-subdirs=no eqtl_1.1.tar.gz
return an Error
* checking for working
2004 May 14
1
help with memory greedy storage
Hello,
I've a problem with a self written routine taking a lot of memory (>1.2Gb). Maybe you can suggest some enhancements, I'm pretty sure that my implementation is not optimal ...
I'm creating many linear models and store coefficients, anova p-values ... all I need in different lists which are then finally returned in a list (list of lists).
The input is a matrix with 84 rows
2009 Mar 31
1
using "substitute" inside a legend
Hello list,
I have a linear regression:
mylm = lm(y~x-1)
I've been reading old mail postings as well as the plotmath demo and I came
up with a way to print an equation resulting from a linear regression:
model = substitute(list("y"==slope%*%"x", R^2==rsq),
list(slope=round(mylm$coefficients[[1]],2),rsq=round(summary(mylm)$adj.r.squared,
2)))
I have four models and I
2004 Apr 23
1
Extracting the MSE and % Variance from RandomForest
Several ways:
1. Read ?randomForest, especially the `Value' section.
2. Look at str(myforest.rf).
3. Look at print.randomForest.
If the forest has 100 trees, then the mse and rsq are vectors with 100
elements each, the i-th element being the mse (or rsq) of the forest
consisting of the first i trees. So the last element is the mse (or rsq) of
the whole forest.
HTH,
Andy
> From: David
2015 Feb 23
2
[PATCH 1/2] nv50/ir: add fp64 support on G200 (NVA0)
Signed-off-by: Ilia Mirkin <imirkin at alum.mit.edu>
---
Untested beyond compiling a few shaders to see if they look like they
might work. nvdisasm agrees with envydis's decoding of these things.
Will definitely get ahold of a G200 to run tests on before pushing this.
.../drivers/nouveau/codegen/nv50_ir_emit_nv50.cpp | 94 ++++++++++++++++++---
2010 Apr 27
3
Problem calculating multiple regressions on a data frame.
Hi there,
I am stuck trying to solve what should be a fairly easy problem.
I have a data frame that essentially consists of (ID, time as seqMonth,
variable, value) and i want to find the regression coefficient of value vs
time for each combination of ID and Variable.
I have tried several approaches and none of them seems to work as i
expected.
For example, i have tried:
2003 Jan 22
1
Intercept in model formulae
Hi,
I'm a new user of R and I'm trying to make a linear model from this kind of
dataset
x
[1] 16.87 19.93 25.85 20.94 17.06 19.49 19.93 25.45 27.74 20.15 25.81
21.06 17.17 20.03 25.50 27.79 20.44 16.88 19.93 25.79
z<-x-10
y
[1] 0.80 1.27 2.22 1.32 0.90 1.18 1.84 2.41 2.97 1.25 2.07 1.41 1.14 1.66
2.59 3.51 1.53 0.81 1.26 2.30
plot(x,y)
I want to be able to force the line of
2015 Feb 23
2
[Mesa-dev] [PATCH 2/2] nvc0/ir: improve precision of double RCP/RSQ results
Does this give correct results for special floats (0, infs)?
We tried to improve (for single floats) x86 rcp in llvmpipe with
newton-raphson, but unfortunately not being able to give correct results
for these two cases (without even more additional code) meant it got all
disabled in the end (you can still see that code in the driver) since
the problems are at least as bad as those due to bad
2012 Mar 18
1
Help with dlply, loop and column names
Hi,
I have a dataframe basically like this:
> head(asturias.gen2011[,c(1,4,9:14)])
municipio total upyd psoe pp iu fac tipo
440 Allande 2031 1.44 31.10 39.75 4.01 21.62 1000-10000
443 Aller 12582 1.37 33.30 37.09 15.53 10.35 10000-50000
567 Amieva 805 1.48 32.69 37.36 6.15 20.16 <1000
849
2010 Mar 20
2
different forms of nls recommendations
Hello,
Using this data:
http://n4.nabble.com/file/n1676330/US_Final_Values.txt US_Final_Values.txt
and the following code i got the image at the end of this message:
US.final.values<-read.table("c:/tmp/US_Final_Values.txt",header=T,sep=" ")
US.nls.1<-nls(US.final.values$ECe~a*US.final.values$WTD^b+c,data=US.final.values,start=list(a=2.75,b=-0.95,c=0.731),trace=TRUE)
2011 Mar 22
2
lm ~ v1 + log(v1) + ... improve adj Rsq ¿any sense?
Dear all,
I want to improve my adj - R sq. I 've chequed some established models and
they introduce two times the same variable, one transformed, and the other
not. It also improves my adj - R sq.
But, isn't this bad for the collinearity? Do I interpret coefficients as
usual?
Estimate Std. Error t value Pr(>|t|)
(Intercept) 1.73140 7.22477 0.240
2010 Apr 08
2
I can´t run the example shown in the inline package
I want to run some R script using the inline package (which allows to create
and run inline C++ code in my humble understanding).
So, after loading the required packages and copy and paste the example that
runs C code (in the Reference Manual as a PDF), I have a compilation error.
Any body has ever tried this inline package?
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2024 Sep 22
2
store list objects in data.table
Thanks everyone for their responses.
My data is organized in a data.table.? My goal is to perform analyses
according to some groups.? The results of analysis are objects.? If
these objects could be stored as elements of a data.table, this would
help downstream summarizing of results.
Let me try another example.
carsdt <- setDT(copy(mtcars))
carsdt[, unique(cyl) |> length()]
#[1] 3
2012 Nov 16
2
R-Square in WLS
Hi,
I am fitting a weighted least square regression and trying to compute
SSE,SST and SSReg but I am not getting SST = SSReg + SSE and I dont know
what I am coding wrong. Can you help please?
xnam <-colnames(X) # colnames Design Matrix
fmla1 <- as.formula(paste("Y ~",paste(xnam, collapse=