similar to: How to remove extra spaces introduced (?) by write.table

Dear all, I am using package.skeleton to build a small packages of misc function for personal use. I have recently discovered that the option force=TRUE doesn't seem to do what is meant to do. Here's what I'm doing: > setwd("/Users/danielk/Documents/R/packages/dk") > files <- paste("codebase", dir("codebase", pattern=".R"),

Hello. I have a problem regarding the output from the R plot window. I have a quite dense dendrogram that I wish to visualize using a suitable software (like Illustrator), and to accomplish that I right click on the image from the plotting device and I save as metafile. The problem is when I scale up the image, some of the vectors in the dendrogram image are inseparable. My question is if

I have used heatmap to visualize my microarray data. I have a matrix of M-values. I do the following. #The distance between the columns. sampdist <- dist(t(matrix[,]), method="euclidean") sclus <- hclust(sampdist, method="average") #The distance between the rows. genedist <- dist(matrix[,], method="euclidean") gclus <- hclust(genedist,

Hi, I''m running Xen 4.2.0 with Linux kernel 3.7.0 and I''m seeing a flood of these messages in xen dmesg: (XEN) traps.c:3156: GPF (0060): ffff82c480159247 -> ffff82c4802170e4 (XEN) traps.c:3156: GPF (0060): ffff82c480159247 -> ffff82c4802170e4 (XEN) traps.c:3156: GPF (0060): ffff82c480159247 -> ffff82c4802170e4 (XEN) traps.c:3156: GPF (0060): ffff82c480159247 ->

This is a patch to forward-port a Xend behaviour. Xend writes IO ABI used for all frontends. Blkfront before 2.6.26 relies on this behaviour otherwise guest cannot boot when running in 32-on-64 mode. Blkfront after 2.6.26 writes that node itself, in which case it''s just an overwrite to an existing node which should be OK. In fact Xend writes the ABI for all frontends including console

Ladies and Gentlemen, As Johan Lindberg points out, the documentation for handling dendrograms is sparse....Does anyone know who is responsible for or working on development of tree methods and objects? I've written a couple of scripts for my own use to translate between parenthetical (A(B(CD))) or binary A00 B10 C11 D11 tree formats and cluster objects in R, but as an inexperienced

Johanna Hasmats wrote: > Ok, attaching all files. You need to run it in the following order: > > parse.RData > > Korrelation.RData I have reduced this script to only include the error > part. > > > Input files are in the following order: > > oligo.prest.out for parse.RData to work. Produces the next input file > > oligolista for Korrelation.RData to

Hi, I''m trying to get Windows Server 2008 R2 installation booting on Xen 4.0.4. Using the following config: kernel = "/usr/lib/xen/boot/hvmloader" builder = "hvm" shadow_memory = "8" memory = "4096" name = "ts" vcpus = "8" cpus = ["0", "1", "2", "3", "4", "5",

Dear Friends, This is Shao from National University of Singapore(NUS). I'm currently doing my exchange study in Royal Institute of Technology(KTH), Sweden. IR is really interesting to me. I've taken a Information Retrieval course during the exchange study here in KTH http://www.csc.kth.se/utbildning/kth/kurser/DD2476/ir12/labblydelser/assignment2. The Weighting Schemes and Learn to Rank

Hello all, My name is Thibault Raffaillac, degree student at KTH, Stockholm, Sweden (in double-degree partnership with Ecole Centrale Marseille, France). I am currently carrying my degree thesis on the usability of compilers, and as such would be very much interested in contributing to LLVM through a Google Summer of Code. The task I would like to propose is implementing the work from my thesis:

Hello all, Some time before Christmas, a project was started. The task was to enhance an existing LiveCD solution with User-mode Linux. A number of requirements was stated, where the greatest challenge was to fit 10 virtual routers within an old no-name PC with only 256MB Ram. And the solution must still be run from a LiveCD. Thanks to Xen, the task was possible to complete. -But, what does it

Hello all (especially MCLUS users). I'm trying to make use of the MCLUST package by C. Fraley and A. Raftery. My problem is trying to figure out how the (model) identifier (e.g, EII, VII, VVI, etc.) relates to the covariance matrix. The parameterization of the covariance matrix makes use of the method of decomposition in Banfield and Rraftery (1993) and Fraley and Raftery (2002) where

I am hoping someone can help translate some WinBUGS code into R code. I would like to use R to create the C[] matrix required for a car.proper model in WinBUGS, but I am having a difficult time negotiating the coding. The C matrix provides normalized weights for each pair of spatial areas. So the WinBUGS example is as follows: # of the weight matrix with elements Cij. The first J1 elements

Please suggest a way out to the following problem. I have a T by n data matrix (say Y) where coulmns are time series of length T. To do some analysis in WinBUGS I need to construct my data as follows. yy<-rep(Y,k) ## this will be a vector Yk<-array(yy,dim=c(T,n,k)) ## data array Here the definition of dim indices is first index: T rows second index: n columns third index: for kth T by n

[I'm cc:ing openssl-users at openssl.org, because questions about this are getting there over and over...] There's a problem that several people who installed OpenSSL to be able to uyse OpenSSH have faced: Could not find working SSLeay / OpenSSL libraries, please install I don't recall how SSLeay was installed, but for OpenSSL, there's a glitch in the way it tries to find

I've compiled OpenSSH 2.3.0p1 with Kerberos 4 from Kth (1.0.4). We use AFS heavily and need the AFS token passing features. This combo is working great on Irix and NetBSD/{alpha,i386}, but it's dying on Digital Unix (4.0f and 5.0). "ssh -v hostname" dumps core in des_pcbc_encrypt() after "Trying Kerberos authentication". My suspicion is that the des routines from

Hi, I'm suffering from a memory corruption problem when compiling OpenSSH 3.0.2p1 with kth-krb4 1.1 on AIX 4.3.2 and 4.3.3. The symptom is that the file name gets zeroed out during ssh key generation, for example during "make install": Generating public/private rsa1 key pair. open failed: No such file or directory. ^ filename normally goes here When I remove krb4 from the

Hello, I have a question in regards to markov chains and transition probabilities. I am trying to figure out a way to calculate the "kth-step transition matrix" of a given matrix. Say for example I have a single step 2x2 matrix: 1 2 P= 1 .95 .05 2 .01. 99 If I were to convert this matrix to a 2-step transition probability matrix I would get:

Hi! How can I get around in R 2.5.1 in Windows: Error in strsplit(linebuffer, "") : object "linebuffer" not found It comes a few lines after the actual strsplit, and yesterday everything was fine… Thank you in advance Kindest regards, ******************************************************************* Johanna Hasmats Ph.D Student Royal Institute

On Thu, Feb 17, 2005 at 16:09:50 -0800, Mikey Sklar wrote > > I use 8MB DOS images with pxelinux to load firmware. Which platform > would you like them for (I have many). I just saw your post and I would definitely be interested in an 8 MB DOS images to work with pxelinux. I have tried the method described in http://people.cs.uchicago.edu/~gmurali/gui/downloads.html but I keep getting