similar to: multiple peaks in data frame

Hi, Is there a way to specify a vector of colors for the tick annotation in a call to axis(), to achieve the x-axis here? <<Rplot003.png>> Thanks, Mark Wilkinson Informatics Analyst St. Jude Children's Research Hospital Department of Pharmaceutical Sciences The opinions expressed here are my own and do not necessarily represent those of St. Jude Children's Research

When I execute the following code, it works just like I want it to: three pages of nine (or fewer) plots. However, when I execute the code with the first and last lines uncommented, I get three pages (files), but the 2nd & 3rd pages have overlapping plots. It's like a new page wasn't created. I'm pretty sure I've either misplaced or left out a crucial call to some

Hi, I posted a while ago about 'overlap' problems using png/jpeg. If what Patrick Connolly suggests is truly happening, I think the following may be related. My new problem is with the following code (the overlap is still there if I use png() instead of postscript(), compounded by the difficulty described below): tmp <- matrix(runif(16000), nrow=16)

I think I'm missing something tonight in the usage of 'legend': plot(0, type="n") legend(locator(1), month.abb[1:5], pch=15, col=1:5) gives me something similar to what I want. But legend(locator(1), month.abb[1:5], fill=T, col=1:5) gives me 5 black boxes. What am I doing wrong? Thank you, > version _ platform i686-pc-linux-gnu arch i686 os

Hi, I apologize if this has previously been posted. I've just subscribed to the R-help digest. I'm writing a plotting function that uses layout() to plot several different plots on the same device. This function uses plot(), image(), and a custom function that uses text(). Each cell of the layout needs different par() parameters, so what I'd like to do is pass them as lists:

I saw in the archive a post from Mark Wilkinson (Feb 1, 2003), saying that some of his R-generated png plots came out overlapping. I am seeing the same thing (with R 1.6.2 on Linux i686). My input file generated 4 plot files. The first two were fine, but the last 2 featured a weird overlay of the remaining graphs. The problem is not seen with postscript of pdf output. -- Allin Cottrell

Hello, it want to know if there is a library that transform a file in excell (*. xls) to text file(*.txt, *,prn, *.csv). Thanks

Hello, my question is if I have two axes in a graphics as I can put him a different color al axis and to the number of the scale. ? Thanks. Ruben

Hi, i 'dont understand how to take a general formula, view this: x<-1:5 y<-c(0,1,1.7,2,2.1.4) dummy<-data.frame(x=x,y=y) formula<-"y~A*log(x)/log(2)" formu<-as.formula(formula) fm<-lm(formu,data=dummy) Error in eval(expr, envir, enclos) : Object "A" not found but A is the parameter of fitting, why is this?Thanks Ruben

Hi, don' t understand why the function fomula have this error, i enclose the parameter "a" with the function I() Thank Ruben x<-1:5 y<-c( 2 ,4 , 6 , 8 ,11) formu<-y~I(a*x) form<-formula(formu) dummy<-data.frame(x=x,y=y) fm<-lm(form,data=dummy) Error in unique(c("AsIs", oldClass(x))) : Object "a" not found

HI, sorry but i don't understand how to make a function with as.function() formula<-"2+3*x" formu<-as.symbol(formula) > formu 2+3*x formul<-as.function(alist(x=,formu)) curve(formul,1,5,col="blue") Error in xy.coords(x, y, xlabel, ylabel, log) : x and y lengths differ > typeof(formul) [1] "closure" and not plot the curve function, Why?

Hi, I want to compute the lower triangle of a square matrix (optionally, sans diagonal). With for() loops I can do something like this: ## 5 by 5 matrix rtn for (j in 1:5) { for (k in 1:j) { if (j != k) { ## optional rtn[j, k] <- my.func(j, k) } } } I'd like to do this with apply(). Is there some way I can do this kind of 'short-circuit'? Thanks, Mark Wilkinson

I have two CSV files (exported from Excel), say file1 and file2. The have the same number of rows, and each has several columns, with names on the first line; and some of the columns in file1 are repeated in file2. Using the "foreign" package, I can read these in separately to dataframes say d1 and d2 with > d1<-read.csv("file1") >

http://r.789695.n4.nabble.com/file/n3312061/x_and_y_values.txt x_and_y_values.txt I have the absorbance values form HPLC Chromatogram. I need to find the peaks in datapoints and area under each peak. I am not sure how how to find the peaks, I tried couple of libraries and peak function but they return me a list of values which when computed from area turns out to be huge nnumbers. In the

Hello, Thank you to all those great folks that have helped me in the past (especially Dennis Murphy). I have a new challenge. I often generate time-series data sets that look like the one below, with a variable ("Phase") which has a series of flat-topped peaks (sample data below with 5 "peaks"). I would like to calculate the phase value for each peak. It would be great to

Full_Name: Benny van der Vijgh Version: 2.7.2 OS: Windows Vista Submission from: (NULL) (194.171.252.108) The return value of peaks() in package splus2R is not consistent. This is because of the call to max.col() without additional parameters which peaks() makes. max.col() has a parameter 'ties.method' which specifies how ties are handled, with "random" by default. This means

In 2004 there was this R-Help posting from Jan 2004: http://finzi.psych.upenn.edu/R/Rhelp02a/archive/33097.html R equivalent of Splus peaks() function? The peaks function there has worked well for me on a couple of projects, but some code using "peaks" failed today, which had worked fine in the past. I was looking for a peak in a test case that was a sine curve over one

Hello all, I have some histograms of amount of DNA in some cells (DU145 cells overexpressing Bax and Bcl-xL for those who wish to know). The histograms show not only two peaks as expected, but three, indicating that some cells have more than normal amounts of DNA. I am interested in knowing how much of the cell populations are in each peak as well as between. I am not really sure how to go

Hi, I apologize for not following the posting rules? Here is the text from my previous post: "I started evaluating the 'Peaks' package a couple of months ago and found it to be quite useful. Getting back to it last week I had to set up my R environment due to hardware changes again. The Peaks package loads with no problem. After successfully reinstalling all packages (RedHat

I am looking for a function in R that is equivalent to the function "peaks" in Splus. This function gives the local maxima of a vector. I do not find it using the help and I 'm not sure it exits in R. Could someone help me ? Thanks, Herve Cardot -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read