similar to: XML package

Hello, I follow the Bioconductor instruction (http://www.bioconductor.org/download <http://www.bioconductor.org/download> ) to install Biocoductor, there have some errors: /usr/lib/R/bin/SHLIB: line 115: make: command not found chmod: cannot access `/usr/local/lib/R/site-library/affyio/libs/*': No such file or directory ERROR: compilation failed for package 'affyio' **

If anybody could help this would be much appreciated... Samba being used with Domain security, as a printer server with an NT 4.0 PDC and BDC. Can browse file shares, can act as printer admin (FINALLY !!), but cannot upload printer drivers, have created print$ share, have created W32X86 and WIN40 directories. When I try to print I get the following error message in machine specific log,

Following the "security = domain in Samba 2.x" document in the SWAT documentation page I do this: root@pc194-79:/usr/local/samba/bin# smbpasswd -j MDU -r pv-mdu-server1 -Ujohnm%xxxxxxxx Joined domain MDU. root@pc194-79:/usr/local/samba/bin# This is in [globals]: security = DOMAIN encrypt passwords = Yes password server = pv-mdu-server1 pv-mdu-server2 And now I start Samba via smbd

Trying to set up a SAMBA print server using SlackWare 8.1. Have successfully joined it to the domain, but cannot browse into the shares, as it constantly asks for a password, and refuses to accept any including root and NTamdin accounts. Anybody have any ideas error logs and smb.conf are below. This is from the machine specific log file: [2002/08/21 11:41:56, 0]

Dear R users and developers After upgrading to Windows XP and R 1.9.1 and 2.0, I retried to execute plot.baysian() to a data set that I had used previously to plot with no problem in win2000 R1.8. The error I get is: Error in points(Mbar[-index], lods[-index], pch = ".") : only 0's may mix with negative subscripts Thanx in advance Dino P.S. I allready sent this message

Hello everybody, by the way, speaking about the r-cran-rcurl package in Ubuntu, the versions in trusty and vivid are linked by error to the "NSS" flavour of libcurl3 instead of the "OpenSSL flavour", which cause at least problems when using the CRAN devtools package. A bit more details are available in the Debian bug tracking system (https://bugs.debian.org/786473). I am not

On 01/12/2012 09:21 PM, r-sig-debian-request at r-project.org wrote: > Message: 4 Date: Thu, 12 Jan 2012 18:39:53 -0500 > From: Michael Rutter <mar36 at psu.edu> > > Hmisc is available on c2d4u > (https://launchpad.net/~marutter/+archive/c2d4u) for Natty and Oneiric, > but not for Maverick, the others you mention are not. > Dirk, Michael - thanks for the useful advice.

Dear friends: I have just read an article entitled " Monitoring of nosocomial invasive aspergillosis and early evidence of an outbreak using cumulative sum tests (CUSUM)", which is published in "Clinical Microbiology and Infection". We have great need to estimate the fluctuation of incidence of IFI in our hospital. But I don't know the details of the stastical method and

Can anybody tell me where to find a copy of heatmap2? I've seen it in my travels across the web but didn't bookmark it and can't find it again. Thanks in advance. Paul `-:-. ,-;"`-:-. ,-;"`-:-. ,-;"`-:-. ,-;"`-:-. ,-;"`-:-. `=`,'=/ `=`,'=/ `=`,'=/ `=`,'=/ `=`,'=/ `=` >==/ >==/

Hi, I am trying to import a tab delimited file (converted from .xls file) by >Test<-read.table("/Users/....txt", header=T, row.names=1) The command has always worked for me, but now I have been getting the error message saying that "duplicate 'row.names' are not allowed. I have checked my original files and all names were unique. I have also tried to change

OK, so this is a really stupid question and should be incredibly simple to do but I can't figure it out. So maybe someone would be so kind as to tell me. I have a vector of zeros and ones. I want to replace all of the zeros with "black" and all of the ones with "gray". That's it. Any help would be appreciated. Thanks, Paul `-:-. ,-;"`-:-. ,-;"`-:-.

Hi, I'm trying to build a mixed-effects model in which I'd like to include either a distance matrix or a phylogenetic tree as a random effect. The troubles I've had are that: 1. Function lmer() in package lme4 only accepts a data frame column as a random factor and not a distance matrix. 2. Function MCMCglmm() in package MCMCglmm only accepts a rooted and ultrametric phylogenetic

Hi, is it intended that one cannot install packages in non-interactive mode, without explicitly setting a CRAN mirror (see below)? Couldn't a default mirror be used in that case? Thank you. Bests, Renaud $ Rscript --vanilla -e "install.packages('whatever')" Installing package into '/home/renaud/R/x86_64-pc-linux-gnu-library/3.0' (as 'lib' is unspecified)

Dear R wizards, Hopeful someone can help me with what I believe is a pretty simple task. I pretty new to R so some (much) of the obvious escapes me. How do I get a distance matrix into heatmap? What do I tell distfun if what I'm trying to map is already an ordered distance matrix? I tried >heatmap(x, distfun=as.dist(x)) where x is the distance matrix but R gave me an error. Thanks in

OK, I have been wrestling with this for two weeks now, so somebody please help ! We have an existing Samba Print Server, running RedHat linux, kernel 2.2.19, that runs fine, but is a P133 with 64 mb ram. So we built a new PC, the slowest thing we could buy, a duron 1 ghz with 512 mb RAM. Old printer server is running Samba 2.2.5, new printer server is running samba 2.2.5, and Slackware 8.1,

I'm using .C() and .External() and have no problems sending integers, reals or strings from R to C. Nor do I have problems sending integers or reals back from C to R. But I'm pulling my hair out trying to set a string value in a C function and then sending it back from C to to R. I've searched the usual sources and tried various casts, macros and allocation schemes, but I'm

Hi all I am a complete newbie to this list (just subscribed) and a newcomer to R (an S user from olden times). I have been using scatter3d to create a 3d scatter plot with surface. The graphic is created within the rgl package and I have used rgl.postscript to export it so I can generate a publication quality image. My problem is that the plotted surface is no longer transparent in the

I am trying to build the XML package on MacOS. I am using the fink installation of libxml-1.8.17. The configuration information is: Configuration information: Libxml settings libxml include directory: /sw/include/gnome-xml libxml library directory: -L/sw/lib -lxml -lz -lz -lxml libxml 2: no Compilation flags: -I/sw/include/gnome-xml -I/sw/include/gnome-xml/libxml

Hi there, I have two questions about heatmap.2 in gplot. My input is a simple square matrix with numeric values between 75 and 100 (it is a similarity matrix based on bacterial DNA sequences). 1. I can sort my input matrix into categories with rowsidecolors (in this case, very conveniently by bacterial taxa). I do a clustering and reordering of my matrix by Rowv=TRUE (and

I'm having difficulty trying to figure out how to write an R wrapper for a C function that has a "scanf-like" argument list. Recall that in C, functions like scanf() return their values through a variable number of arguments whose type and number is determined by a format string. In C this is handled by parsing the format string and then