similar to: Query: colouring graph

Dear all, I need to read an ASCII file with diffent length lines. This is what is contained in the file gene.txt: 1st line ID description snp_id genotype 2nd line 10003 Low rs152240 3rd line 10003 Moderate rs189011 TC 4th line 10004 Conservative rs152240 GC 5th line 10004 Bad rs154354 6th line 10013 Bad rs152240 7th line 10019 Conservative rs152240 AC etc... This is what I would like to obtain

Dear all, I have a surprising problem with the representation of frequencies in a histogram. Consider, for example, the R code: b<-rnorm(2000,3.5,0.3) hist(b,freq=F) When I plotted the histogram, I expected that values in the y-axis (the probability) varied between 0 and 1. Instead, they varied within the range 0-1.3. Have you got any suggestion for obtaining a correct graph with

Dear all, is there a automatic method to obtain Odds Ratio estimates and their confidence intervals from a GLM Logistic model? Thanks Cristian ============================================= Cristian Pattaro ============================================= Unit of Epidemiology & Medical Statistics Department of Medicines and Public Health University of Verona cristian@biometria.univr.it

Dear all, I'm using the package "Genetics", and I'm interested in the computation of D' statistics for Linkage Disequilibrium, for which the LD() command has been realised. Unfortunately I don't find any reference on "how" the D' is computed by the LD() function. In the package documentation it is generally referred as "MLE" estimation, but

Hi! After installing R 2.0.0, I have problem with the "help.search" as below: > help.search("table") Error in help.search("table") : could not find package 'file23525' > help.search("mean") Error in help.search("mean") : could not find package 'file23525' I have had the same problem with other request... What is

Hi Cristian, I don't know about a R routine for exact CIs, but I found a function called "ageadjust" using a gamma distribution approximation some time ago -take a look at http://medepi.org/epitools/rfunctions/index.html. That Webpage seems a bit outdated now, but the calculations given in the ageadjust functions should still work, I think. Maybe this helps; regards Heinrich.

Hello, I have a strange problem affecting samba-3.0.10-1.4E.12.2 on a Red Hat Enterprise Linux AS release 4 system. We have a multi-domain configuration here at University of Verona (Italy). We use Samba as PDC for several faculties. Each faculty has its own daemon instance and its own smb config file: [root@ldapvr1 ~]# ls /etc/samba/smb.* /etc/samba/smb.conf

Hi all! Do you know if there is any R function/package that can be used to estimate "logit" models with panel data and forecasting? Thanks, Moysés. -- Moysés Nascimento Bacharel em Estatística/UFES Mestre em Estatística Aplicada e Biometria/UFV Doutorando em Estatística e Experimentação Agropecuária/UFLA moysesnascim@gmail.com [[alternative HTML version deleted]]

Dear all, I'm working with R 1.2.2 on win98 (256Mb RAM) with ESS 5.1.18. It happens that the start-up is very slow. I don't know exactly how to measure, but with a simple watch I recorded 15 seconds, while the startup of S+ 2000 (Sqpe+4 under ESS) takes around 3 seconds. Tha fact is that sometimes it takes almost a minute (58.30 sec recorded) for the prompt to appear! And ESS gives me an

Dear R users, I would like to employ count data as covariates while fitting a logistic regression model. My question is: do I violate any assumption of the logistic (and, more in general, of the generalized linear) models by employing count, non-negative integer variables as independent variables? I found a lot of references in the literature regarding hot to use count data as outcome,

Hi all, Following this guide?https://wiki.samba.org/index.php/Samba_AD_DC_HOWTO After installing samba4 stable version on a debian64 with no issues, I encounter this issue running samba-tool domain provision: ERROR(runtime): uncaught exception - (16, 'Unknown error') ? File "bin/python/samba/netcmd/__init__.py", line 175, in _run ? ? return self.run(*args, **kwargs) ? File

Is it possible to regenerate the index files, on other conditions than the mbox file being read? For instance, it would be nice if I could regenerate the index for a specific mbox whenever procmail delivers mail to it. If theres no existing solution, would it be possible to make a small script with something like "nc" that could send an imap command to dovecot, so that dovecot would

Dear R users, I am trying to fit a Cox model such as: Surv(time,event) ~ X1+X1:X2 or Surv(time,event) ~ X1*X2 -X2, This code is working with coxph but not with cph (nor with psm), and the error message is: Error in if (!length(fname) || !any(fname == zname)) { : missing value where TRUE/FALSE is required Any idea about the cause of the problem and how to manage it within the Design

I'm having trouble getting dovecot lda to work. I'm using dovecot b3, and a dovecot lda cvs checkout, according to http://wiki.dovecot.org/LDA I tr to use the .forward method: |"/usr/local/libexec/dovecot/deliver" I also tried this line: "|/usr/local/libexec/dovecot/deliver -c /etc/dovecot.conf -d joakim" I get this error in maillog: stat=unknown mailer error 80 I

Hello, I'm interested in trying the dovecot-lda with sieve support. What would be the proper way to test it? I'm currently using a Fedore core 2 server, with spamassassin and procmail. To get the same effect with dovecot-lda, would I put a line like this in my .forward? spamassassin|dovecot-lda I'm just guessing, so please correct me if im wrong. Im thinking of setting up a

Its much easier to build RPM:s now, thanks :) -- Joakim Verona www.verona.se

-- Joakim Verona www.verona.se

I'm looking for a spec/rpm file suitable for fedora 11/12, for dovecot and pidgenhole sieve. Has anyone done this yet? Otherwise I will attempt to the dovecot 1.2 spec files for f11. -- Joakim Verona

Hello, Due to a misstake I got many duplicate emails in my inbox folder. They are stored in maildir format, so my initial thought was do simply md5sum the mail files and remove the duplicates. This doesnt work because the mails has differinf uids. Any other hints? -- Joakim Verona

I've developed a web application in PHP and R my script is <?php ... exec("R CMD BATCH --silent /home/marcello/R_in/myfile.bat /home/marcello/R_out/myfile.out"); ... ?> This script execute in R batch mode and write the myfile.out. On Win2000 the similar script is ok, but on linux I've a problem. I suppose is a permession problem because the same script on shell