Displaying 20 results from an estimated 500 matches similar to: "hypergeometric & population estimates"
2006 Jan 30
4
Logistic regression model selection with overdispersed/autocorrelated data
I am creating habitat selection models for caribou and other species with
data collected from GPS collars. In my current situation the radio-collars
recorded the locations of 30 caribou every 6 hours. I am then comparing
resources used at caribou locations to random locations using logistic
regression (standard habitat analysis).
The data is therefore highly autocorrelated and this causes Type
2012 Oct 01
1
Retrieve hypergeometric results in large scale
I'm going to use
dhyper(x, m, n, k)
to get a 95% coverage. Let me use an example to explain my problem:
Suppose I have a urn containing 90 red and 10 black balls.
Now I wanna remove 3 from the urn. By the following codes:
m<-90;n<-10;k<-3;
x<-0:3
dhyper(x,m,n,k)
I can obtain the probability that 0,1,2,3 red balls will be removed.
0.000742115 0.025046382 0.247680891
2002 Sep 20
0
Samba Help!
I read the docs and did the following: smbd, nmbd, winbind all running,
also able to get domain user/group
info. with "wbinfo". However still can't su, telnet to the linux box with
my active directory user account on w2k. Am I missing something?
In /lib
------
/lib/libnss_winbind.so
/lib/libnss_winbind.so.2
/etc/nsswitch.conf
------------------
passwd: files winbind
shadow:
2010 Mar 30
1
Multivariate hypergeometric distribution version of phyper()
Dear R Users,
I employed the phyper() function to estimate the likelihood that the
number of genes overlapping between 2 different lists of genes is due to
chance. This appears to work appropriately.
Now i want to try this with 3 lists of genes which phyper() does not
appear to support.
Some googling suggests i can utilize the Multivariate hypergeometric
distribution to achieve this. eg.:
2002 Sep 20
0
Fw: Winbind-bug Redhat 7.2
----- Original Message -----
From: David Hoang
To: samba-bugs@samba.org
Sent: Friday, September 20, 2002 4:20 PM
Subject: Winbind-bug
I am using winbind and I notice it's not letting me logon to my unix box
unless i have created a unix-style account with entries in /etc/passwd & shadow.
I thought winbind was suppose to allow me to logon using my active directory (w2k)
box. I please
2008 Oct 13
2
Using an image background with graphics
I would like to use a map or aerial photo as a background to plotting
solid lines and text, and semi-transparent color contours, in base and
lattice graphics. Plot coordinates need to be consistent with the
georeferenced background. For example, a color contour plot would have
an gray-toned aerial photograph as a background for overprinted
semi-transparent color contours of some spatially
2010 Oct 28
1
adding copies of rows toa data frame based upon start and end dates
Hello All and thanks in advance for any advice.
I have a data frame with rows corresponding radio-collared animals (see
sample data below). There is a start date (DATESTART), and end date
(DATEEND), and the number of days on air (DAYSONAIR). What I would like to
do is add a column called DATE to so that each row ID has a row for every
day that the radio collar was on the air while copying all
2012 Sep 22
1
Creating multiple maps so points don't overlap
Hello,
I am working within package 'maptools' to plot a number of collared animal
locations by reading in shapefiles of locations, roads, hydrology, and
landownership as imported layers.
The trouble I have is that some individual locations are overlapping and I
would like to "zoom" into or create new plots for overlapping points/points
that are too close together. I will be
2005 Sep 19
3
Extended Hypergeometric Distribution
Dear R Users,
There exists a non-central hypergeometric distribution function in the (MCMCpack) package, and a hypergeometric distribution function in the (stats) package.
Is there a function for sampling from an extended hypergeometric distribution?
Thanks,
Narcyz
This message is intended for the addressee named and may con...{{dropped}}
2006 Nov 28
2
Aligning aerial photographs and maps
I have read in Paul Murrell's book R Graphics about how to use a bitmap
as background for a plot (page 107). Also, I routinely use function
read.shape() in package maptools to read maps in shapefile format. Now,
I would like to overlay an aerial photograph in .jpg format and a map. I
think I could do the alignment manually for each case, but wonder if
there is a better, automated way. I notice
2008 Dec 03
1
hypergeometric
Hi,
I hope somebody can help me on how to use the hypergeometric function.
I did read through the R documentation on hypergeometric but not really
sure what it means.
I would like to evaluate the hypergeometric function as follows:
F((2*alpha+1)/2, (2*alpha+2)/2 , alpha+1/2, betasq/etasq).
I'm not sure which function should be used- either phyper or qhyper or
dhyper
Where
2001 Sep 08
0
R-function available for noncentral hypergeometric distribution
For those who are interested, I have made available a R function for
noncentral hypergeometric distribution at
http://www.geocities.com/jg_liao/software/Hypergeometric/hypergeometric_in_R.txt
The paper that describes the algorithm will appear in The American
Statistician.
The function does not run on S-plus as the R's scoping rule is used.
Here is how the function can be used:
> n1
2012 Mar 19
2
hypergeometric function in ‘ mvtnorm’
Is there any way to know how the "dmvt" function computes the hypergeometric
function needed in the calculation for the density of multivariate t
distribution?
--
View this message in context: http://r.789695.n4.nabble.com/hypergeometric-function-in-mvtnorm-tp4483730p4483730.html
Sent from the R help mailing list archive at Nabble.com.
2010 Jun 08
1
hypergeometric series in R
Hello.
Somebody knows how to compute generalized hypergeometric series in R?
(see
http://functions.wolfram.com/HypergeometricFunctions/HypergeometricPFQ/02/
to understand what I mean)
Thanks in advance,
Arnau.
2008 Feb 07
1
Appell Hypergeometric function
Dear All,
I am looking for an implementation in R of the Appell Hypergeometric
function.
Any suggestions will be more than appreciated!
GP
--
dr. Giovanni Parrinello
External Lecturer
Medical Statistics Unit
Department of Biomedical Sciences
Viale Europa, 11 - 25123 Brescia Italy
Tel: +390303717528
Fax: +390303717488
email: parrinel at med.unibs.it
2008 Sep 25
1
What distribution is related to hypergeometric?
I have been reading, in various sources, that a poisson distribution is
related to binomial, extending the idea to include numbers of events in a
given period of time.
In my case, the hypergeometric distribution seems more appropriate, but I
need a temporal dimension to the distribution.
I have weekly samples of two kinds of events: call them A and B. I have a
count of A events. These change
2011 Aug 31
0
Fitting the negative hypergeometric distribution
I'd like to fit the (1-displaced) negative hypergeometric distribution
to data samples such as the following:-
x <- c(370, 311, 299, 266, 265, 232, 197, 198, 170, 154, 133, 123, 120,
103, 80, 72, 69, 67, 67, 50, 36, 35, 26, 23, 15, 11, 9, 6, 5, 3, 3, 2,
2, 2)
i.e., I want to estimate the parameter values of K and M (with my data,
n would usually be the same as the length of the data
1997 May 12
1
R-alpha: Hypergeometric Distribution
A cut and paste typo has crept in and is rendering all values returned
for the hypergeometric distribution incorrect. The problem is in
src/main/arithmetic.c in the function "math4". The lines
PROTECT(sy = allocVector(REALSXP, n));
a = REAL(sa);
b = REAL(sb);
c = REAL(sc);
d = REAL(sc); /* <-- change this line */
y = REAL(sy);
should
2010 Aug 13
1
hypergeometric vs fisher.test
Dear R team,
I have a simple question.
I tried this command:
phyper(17,449,19551,181, FALSE)
[1] 1.47295e-07
and then I tried this command:
(fisher.test(matrix(c(17,449,181,19551),2,2),
alternative='greater'))$p.value
[1] 3.693347e-06
Shouldn't be identical the results of the two commands ?
What is the difference ?
Thx a lot
--
View this message in context:
2003 May 02
1
Does R implement Hypergeometric test?
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