similar to: abline() plot order

I am rendering a plot using boxplot, mtext, abline, etc. The X11 view of the plot looks correct. When I change to the png device to: png(filename="bxplot.png",width=640,height=640) I get half of a character label plotted in the lower left corner in the resulting .png file. The character fragment started to appear in png when I started using mtext.

Dear R Users, (and dear Marc) First of all many thanks for the answers to my previous questions. I would like to barplot the mean percent change of a variate with it's CI. Bars should start from the zero reference line to height (in barplot2). Is there a way to tweak barplot2, for example, to do that ? I have tried to see what the function was but unlike other functions was not able to

Hi, Is there any equivalent of type="n" when constructing barplots which will still construct the axes (plot=F, as it says doesn' plot anything at all). Alternatively I tried setting col="white" and border="white" but the border command does not seem to be operational. True?? Any other ideas? What I'm actually trying to do is construct vertical abline()'s

Hi all, my apologies for a probably very obvious question but i can't figure out if, on a bar plot, there is a simple way to have the x-axis cross the y-axis at 1, when the y-axis is on a log-scale? I want to draw a bar plot, and have some of the bars "drop" below 1 while starting from 1. Is this possible? I have been trying various things using barplot, barplot2 etc... without

In <R 1.8.1 the following fragment worked properly, now (1.8.1) it creates the following warning/error: Any advice appreciated. stt <- data.frame() # load all datasets into a dataframe for (ds in 1:n) { stt[ds] <- as.matrix(read.table(fileList[ds])) } -- > stt <- data.frame() > # load all datasets into a dataframe > for (ds in 1:n) { + stt[ds] <-

Dear List: I am working to generate graphs for individual students that will be created through a series of loops in Sweave. Before doing so, I am still trying to design the graph. The code for creating the barplot is below with some sample datapoints just made up for now. Ultimately, this chart will take data from an lme object using longitudinal student data. So, the dots represent the

Hello developers folks! First, congratulations for the wonderful work with R. For science, barplots with error bars are very important. We were wondering that is so easy to use the boxplot function: boxplot(Spores~treatment, col=treatment_colors) But there is no such function for barplots with standard deviation or standard error. It becomes a "journey" to plot a simple graph (e.g.

I need to increase the width of the border in a barplot, i checked both barplot, and barplot2, but cant find how to do it. how can I do? thank you john [[alternative HTML version deleted]]

I am using barplot, and barplot2 in the gregmisc bundle, in the following way: barplot2(sort(xtabs(expend / 1000 ~ theme)), col = c(mdg7, mdg8, mdg3, mdg1), horiz = T, las = 1, xlab = "$ '000", plot.grid = T) The problem is that the values of 'theme', which is a factor, are in some cases rather long, so that I would like to wrap/split them at a space once they

Hello, I try to handle a simple bar-plot, but it turns out to be not as simple as I thought. 1) I have created a .dat-File, e.g. test.dat: DATA DATA-SEM 2.2 0.32 6.2 1.30 12.7 1.61 48.6 3.08 4.1 0.86 4.5 0.32 1.5 1.13 1.2 1.08 The first row is the data represented by bars. The second row deals with the Standard Error of Mean. The lines correspond to time-intervals of experiments. 2) I now

Hello R-experts, I am facing a strange problem while creating a barplot. I have serise of data of which the first on is around 162589 while the remaining data are around 0-150. so when I am ploting the barplot with all the data I am getting a single line -> test1.jpg. But If I remove the 1st value i.e 162589 then I am getting a normal barplot -> test2.jpg Can some one help me regarding

Hello, I get a nice looking barplot using the barplot2 function in the gregmisc package: body2 <- barplot2(hh3, beside = TRUE, col = c("mistyrose", "lightcyan"), .... cex.names = 1.0, plot.ci = TRUE, ci.l = cil, ci.u = ciu, plot.grid = TRUE) box() However, obviously I lose the collors when converting from ps to a pdf (outside of R)

Is there a list of all contributed R libraries available through CRAN? Ideally it would include a one or two line description. I am looking for a packages() command similar to library() but that would access the CRAN repository and provide a listing of the current libraries, and version. example: http://www.cpan.org/modules/01modules.index.html

Hi everyone, This is a graphics question, concerning presentation rather than actually producing figures. After much fiddling I've managed to create bar plots showing error bars. I've put in an x-axis, which goes along all the bars, but doesn't appear between the y-axis and the first bar. I've searched all the resources I have access to but can't find anything addressing this

Hi list, I'm using barplot2 form the gplots package to plot a few numbers (I want to add SD bars later). However, I would like the y-axis not to start from 0 but 500. When I add the parameters YLIM, something goes wrong. The graph is not 'cut off' at 500. Instead the bars seems to sink trough the bottom of the graph. Because its a little hard to explain, here is a self-containing

Hi all, - how can I do a barplot with rotated axis labels? I've seen the example for just a plot in the FAQ, but I'll missing the coordinates to plot my text at the right position beneath the bars. Is there any (easy?) solution? - how can I set the y-axis in a barplot to logarithmic scale? Many thanks in advance! Best Regards Tom --

Dear All I am trying to graph a proportion and CI95% by a factor with ooplot (any other better solution ?) It works well until I try to add the confidence interval. this is the error message and and a description of the data: > dat1 PointEst TT1 1 3.6 TT2 2 5.0 TT3 3 5.8 TT4 4 11.5 TT5 5 7.5 TT5 6 8.7 TT7 7 17.4 > dat2

¿Alguien sabe cómo dibujar un diagrama de barras agrupado (o apilado) con diferente número de elementos en cada grupo y que la leyenda quede "correcta"? Si utilizamos barplot (o barplot2 de gplots) podemos definir una matriz con columnas las diferentes alturas para cada grupo y si un grupo tiene menos categorias simplemente asignamos NA a los elementos sobrantes de esa columna. Pero no

Hi, help.I would like to plot the mean and standard deviation against a factor in the xaxis- in other words I want an errorplot. I also want to put the standard deviation like a "T" on top of a barplot. How can do this in R Bragadeesh

I am making a barplot using barplot2 from gplots and would like to format the names of my categorical variables (tree species) on the x- axis so that the genus name is above the species name (to save room). My code so far is: speciesnames<-c("Dialium guianensis", "Inga alba", "Tachigali versicolor", "Brosimum utile", "Caryocar