similar to: Can not install the packages

I coudn't install Rgobi: Details: my system: Redhat 9.0 platform i686-pc-linux-gnu arch i686 os linux-gnu system i686, linux-gnu status major 1 minor 7.0 year 2003 month 04 day 16 language R --what I did: downloaded ggobi /ggobi_0.99-10.tar.gz ./configure make to run: /usr/local/src/ggobi/bin/ggobi runs fine installed Rggobi (as recommended at

I am troubled by what appears to be a glitch in the current distribution, or in its installation on our system. I've traced it, and found a work- around. Is this normal? Is there a cleaner solution? The problem: During a package installation, the warning message "WARNING: ignoring environment value of R_HOME" from line 31 of <R_HOME>/bin/R is accidentally spliced into the

Starting html help in the current version of R has a very annoying side-effect. It indiscriminantly removes $HOME/.R, and replaces it with a virgin copy. I discovered that when all of a sudden I got complaints about my startup "library" not being found. Below is a modified version of the script that doesn't do this. It is not perfect yet (it shouldn't try to recreate links

Hi my installation of ggobi (!) was successful, but when I try to install Rggobi as described on http://www.ggobi.org/INSTALL.html: as non-su: R_HOME=/usr/lib/R export R_HOME GGOBI_ROOT=/usr/local/src/ggobi export GGOBI_ROOT R_LIBS=/usr/lib/R/library export R_LIBS as: su ln -s $GGOBI_ROOT/lib/libggobi.so /usr/lib/. ln -s $GGOBI_ROOT/lib/libgtkext.so /usr/lib/. R CMD INSTALL Rggobi_0.53-0.tar.gz

We are trying to setup a Windows server that will allow any of our users to build a binary R package given a source package. The idea is to have a central R installation and allow users to install packages to their own package library for the purposes of binary package building. It seems, however, that write access to $R_HOME is required as part of the install step even when -l is used to

First I tried 'setenv R_SHELL /usr/local/bin/bash', as bash is the weapon of choice for the faculty wishing to use R, then ran ./configure as before. The ./configure output line using as R_SHELL for scripts ... /usr/local/bin/bash would seem to indicate that the R_SHELL environment variable was recognized and acknowledged. However, I got the same build error: gnumake[2]: Entering

Thanks a lot for your suggestions. I see what you mean. I have removed all unnecessary files and dependences on https://github.com/Jiefei-Wang/example, but still no luck. I've tried to install the package as a user, not admin, but I got the same error. Also, I apologize for spamming the mail list. I will keep my reply as neat as possible. Martin has suggested checking the encoding of the file

Below is the output. Thanks for the help. > Sys.getenv() BASH_FUNC_module() () { eval `/cm/local/apps/environment-modules/3.2.10/Modules/$MODULE_VERSION/bin/modulecmd bash $*` } COLUMNS 152 CPATH /cm/shared/apps/uge/8.2.1/include CVS_RSH ssh DISPLAY localhost:10.0 EDITOR

I am at a new job where my sys admin installed R in linux and it does run when I log in as a user. I am on linux 2.1.2 but i'm not sure if it''s redhat etc ( but i doubt this matters for my question ). The alias put in my .envfile ( for the kshell ) is R = "/ms/dev/fsf/R/2.0.0/install/.exec/ia32.linux.2.4.lib6/lib/R/bin/exec/R" and my R_HOME is

Thanks, Jiefei, unfortunately your example does not work on my system, and also it is far from minimal. The error message you are getting is from Windows and could be caused for example by accidental quoting of the path using single quotes. Issues with RStudio or devtools would have to be discussed in their mailing lists/with their authors, but my guess is that the problem is in your local

Hello, I've recently transitioned to using R in Linux. My OS/installation versions are: $ Red Hat Enterprise Linux AS release 4 (Nahant Update 6) $ Linux lx-chgmqsd05 2.6.9-67.0.1.ELsmp #1 SMP Fri Nov 30 11:57:43 EST 2007 x86_64 x86_64 x86_64 GNU/Linux I am trying to create a repository of packages under ~/R/library which I've created since I do not have admin access on my system. From my

Hello, I've recently transitioned to using R in Linux. My OS/installation versions are: $ Red Hat Enterprise Linux AS release 4 (Nahant Update 6) $ Linux lx-chgmqsd05 2.6.9-67.0.1.ELsmp #1 SMP Fri Nov 30 11:57:43 EST 2007 x86_64 x86_64 x86_64 GNU/Linux I am trying to create a repository of packages under ~/R/library which I've created since I do not have admin access on my system. From my

Jiefei, you did not commit all files into the example package - your example has things like RcppExports.cpp as well as additional flags which are not in your GH project. I suspect the issue is with the extra flags you're adding - those don't come from R. Please make sure you can replicate the issue with the GH package you created. Cheers, Simon * installing *source* package

I am having trouble getting an install of RCurl to work properly on a Unix server. The steps I have taken are: 1. installed cUrl from source without difficulty 2. installed RCurl from source using the command ~/R_HOME/R-devel/bin/R CMD INSTALL -l ~/R_HOME/R-devel/library ~/RCurl_0.8-0.tar.gz I received no errors during this install 3. when I go back to R and require(RCurl), I get >

I am having trouble getting an install of RCurl to work properly on a Unix server. The steps I have taken are: 1. installed cUrl from source without difficulty 2. installed RCurl from source using the command ~/R_HOME/R-devel/bin/R CMD INSTALL -l ~/R_HOME/R-devel/library ~/RCurl_0.8-0.tar.gz I received no errors during this install 3. when I go back to R and require(RCurl), I get >

Hi, I'm running R-1.9.1 and I'm unable to succesfully install packages using either 'R CMD INSTALL xxx.tar.gz' or 'install.packages("xxx"). For example, if I try to install the msm package I get: R CMD INSTALL msm_0.4.1.tar.gz * Installing *source* package 'msm' ... ERROR: R_HOME ('/root/R-1.9.1') not found ERROR: installing package DESCRIPTION

It is embarrassing, but I just can't get "Rcmd INSTALL" to work. I'm using R1.2.0 under Windows NT4.0, and what I do is open a commands window (cmd.exe) in directory "D:\", and then try the following: ----- REM this is how my PATH is set: D:\>set path = %SystemRoot%\system32;%SystemRoot%;%SystemRoot%\system32\nls\DEUTSC H;d:\PROGRA~1\pfe;

Hi, with R v1.7.1 (=I don't recall I saw it before) I noticed that R CMD INSTALL sometimes generates nonsense information, e.g. "Bundle: NA", even if there was a correct DESCRIPTION file too. I turns out that it happens when a DESCRIPTION.in has empty lines at the end. I have observed this behavior on both Sun Solaris 9 and Windows XP Pro (but here I am using unsupported Cygwin w/

On 7/28/2015 1:32 PM, Uwe Ligges wrote: > Just add the line > > R_LIBS_SITE=F:/R/library > > to the file R_HOME/etc/x64/Renviron.site Thanks, Uwe I have no way to test this and our IT people who do the installation know nothing of R, so follow-up questions: * There is no R_HOME/etc/x64/Renviron.site file, but there is a R_HOME/etc/Rprofile.site I can modify and ask them to

On 29 Oct 2015, at 10:44 , Rainer M Krug <Rainer at krugs.de> wrote: > Out of interest: What is the magic ~R CMD~ is doing? Is it documented > anywhere? R is open source.... (and shell scripts are considered self-documenting by some) On Unix-alikes, R is a shell script which, if called with 1st argument CMD, calls ${R_HOME}/bin/Rcmd, which is another shell script that ends with