similar to: Background color in plots.

Hello developers folks! First, congratulations for the wonderful work with R. For science, barplots with error bars are very important. We were wondering that is so easy to use the boxplot function: boxplot(Spores~treatment, col=treatment_colors) But there is no such function for barplots with standard deviation or standard error. It becomes a "journey" to plot a simple graph (e.g.

Version 0.6.0 of the gregmisc package has just been released on CRAN. Description: =========== Package: gregmisc Description: Misc Functions written/maintained by Gregory R. Warnes Title: Greg's Miscellaneous Functions Version: 0.6.0 Date: 2002/09/23 Maintainer: Gregory R. Warnes <Gregory_R_Warnes at groton.pfizer.com> Author: Gregory R. Warnes. Includes code provided by Ben

Version 0.6.0 of the gregmisc package has just been released on CRAN. Description: =========== Package: gregmisc Description: Misc Functions written/maintained by Gregory R. Warnes Title: Greg's Miscellaneous Functions Version: 0.6.0 Date: 2002/09/23 Maintainer: Gregory R. Warnes <Gregory_R_Warnes at groton.pfizer.com> Author: Gregory R. Warnes. Includes code provided by Ben

Hi, I have a 2D chart that is divided into four quadrants, I, II, III, IV: plot(1:10,ylim=c(0,10),xlim=c(0,10),type="n") abline(v=5,h=5) text(x=c(7.5,7.5,2.5,2.5),y=c(2.5,7.5,7.5,2.5),labels=c("I","II","III","IV")) I would like to fill each quadrant with a background color unique to the quadrant. Does anyone know how to do this in R? Thanks, --

I have used polygon() to mark the confidence limits of a survival curve. In another project, I have used the col parameter to fill my boxplots. The poly() description refers to filling but actually produces hatching (i.e. lines ). boxplot() does truly fill the boxes with a colour or shades of grey (e.g. col="red"). My novices perception of R graphics is: If you can hatch it, you

Dear All, I have the following data coming out from s <- with(final, summarize(norm, llist(gtt,fdiab), function(norm) { n <- sum(!is.na(norm)) s <- sum(norm, na.rm=T) binconf(s, n) }, type='matrix') ) ie gtt fdiab norm.norm norm.norm2 norm.norm3 18

Hello, I am making a boxplot of 13 boxes. I tried to color the box using 13 colors but failed. Only red and brown were displayed. Green, blue, and grey disappeared. Please kindly advise modification after checking the code below. Thank you in advance. Elaine R code # data input dataN <-read.csv("H:/a_mig_distance_B_NB/R_data/Mig_bird_586_20120925.csv",header=T, row.names=1)

Hello everybody, often I plot boxplots with different number of boxes (up to 200 boxes). I'd like to give every box a readable label on the x-axis. Therefore, I decrease the fontsize of the names and plot them vertical. But if you zoom into the plot (pdf) you will find an offset between the tickmark and the label - the label is shifted to the right. If you vary the box.count in the

Hi all, I would like to ask a question with regard to R graphics. I am currently trying to add data points in boxplots using points(). In my script, I add up boxplots three times using add=TRUE. I use points() every time I add boxplots, and I see data points. However, I see all data points are clustered at three specific points on x-axis; the locations of the data points are not overlapping with

I've been using par() to check the graphics parameters associated with both plot(<fitted linear model>) and plot(<grouped data object>). AFAIK the only differences are in the $cxy, $usr, $xaxp, and $yaxp parameters but the background color for the grouped data plot is grey while the linear model plot has a white background. When I've tried par(bg = "white") prior to

Hi! How does one change the background color of the map-panel in spplot()? Example: library(sp) data(meuse.grid) gridded(meuse.grid) = ~x+y spplot(meuse.grid, "part.a") How would I get another background-color for the map-panel (but not for the whole plot) here? Thank you! Marcel

Hola: Soy nuevo en esto de R, llevo toda la mañana perdida con esto, a ver si alguien me puede ayudar, Cuando genero el gráfico con el siguiente archivo: library(gplots) data <- read.table("data.dat",h=T) postscript(file = "join10kb.ps", horizontal = FALSE, onefile = FALSE,family = "Helvetica", width = 5, height = 4) par(mar=c(5.1, 4.1, 0.1, 0.1)) d <-

R-Users, Hopefully someone can shed some light on these questions as I had little luck searching the archives (although I probably missed something in my search due to the search phrase). I estimated multinomial probabilities for some count data (number successful offspring) ranging from 0 to 8 (9 possible response categories). I constructed a barplot (using barplot2) and I want to

Dear Greg, Thanks for the new release. The decomposition of the SSQ is just what I need! Regards, Martin. Martin Hoyle, School of Life and Environmental Sciences, University of Nottingham, University Park, Nottingham, NG7 2RD, UK Webpage: http://myprofile.cos.com/martinhoyle >>> gregory_r_warnes at groton.pfizer.com 10/30/02 07:16PM >>> Version 0.7.3 of the gregmisc package

Hi all, I am using Sweave to produce a document. Unfortunately, I have to print several copies and I can't print them in color. So I would like to change the way of printing the code. I would like to print the code in a box with a black borderline and a grey background (quite classic). Is it possible to do it by changing some Schunk options? Christophe

Hi - I'd like to have the area between 2 lines on a x-y plot be filled with grey, but I haven't had any luck using polygon or rect. (In reality, I'd like to do this for twice - once for a low group and once for a high group - and then I'd like to plot a set of data points for a 'normal' group together with these 2 grey areas.) Here's a simple example of the 2 lines:

Very much a rookie at R, and have only recently started using it again so pardon the simple question. I am trying to produce a box plot from one data set and then overlay a line plot from another data set. The box plot data set is made up of 20 sets of 30 data points, or 600 total data points. The line has only 30 total data points. The box plot is plotting fine, but for some reason, the line plot

Dear R Gurus Just started on R ! Using xYplot from Hmisc (R 1.9, W2K) I get a grey/blue background that I would like to change to white (ie no background) or may be to another color. Tried to do that with par(bg) but only changed the color of the trellis heading. What's the right command to do that ? Kind regards, JL PS if anyone has nice default settings for win device please let me

Dear R people, I wonder how to hide tick lines behind other figures in a plot, e.g. in a boxplot. # Sample code: x<- c(rep(4,50),rep(5,20),rep(6,50),rnorm(20,5,1)) boxplot(x) axis(2,tck=1,col.ticks='grey',lty=5 ) # end of sample code The tick lines is put on top of the box-plot, but I would like to put these lines behind the box and whiskers.. Regards Helmer

Hello, I try to handle a simple bar-plot, but it turns out to be not as simple as I thought. 1) I have created a .dat-File, e.g. test.dat: DATA DATA-SEM 2.2 0.32 6.2 1.30 12.7 1.61 48.6 3.08 4.1 0.86 4.5 0.32 1.5 1.13 1.2 1.08 The first row is the data represented by bars. The second row deals with the Standard Error of Mean. The lines correspond to time-intervals of experiments. 2) I now