similar to: install error

Deepayan Sarkar <deepayan.sarkar at gmail.com> writes: > On Thu, Oct 29, 2015 at 2:09 PM, Rainer M Krug <Rainer at krugs.de> wrote: >> Dirk Eddelbuettel <edd at debian.org> writes: >> >>> On 28 October 2015 at 21:39, Marius Hofert wrote: >>> | Out of laziness I just used "R CMD batch" instead of "R CMD BATCH". I >>> |

Hi, I directed somebody to install R (2.6.1) on his OSX computer, following instructions from http://cran.r-project.org/bin/macosx. She can run R from the console. But plot(1:10) doesn't produce any output or open a window (as I am used to from linux). More importantly: Rscript is not in the path (minor problem ln -s is hopefully doable). I tried to put a hardcoded path to Rscript into the

Hello everybody I'm am trying to build a pdf out of the Rd files that i wrote for a package, so that I can attach it to my thesis. if i Run Rd2pdf (or Rd2dvi) I get this error massage: Hmm ... looks like a package Converting Rd files to LaTeX . Creating pdf output from LaTeX ... Error in texi2dvi("Rd2.tex", pdf = (out_ext == "pdf"), quiet = FALSE, : Running

I construct a pdf package manual in Windows 7 using R CMD Rd2dvi --pdf --no-preview [packagename] Page numbers are listed correctly under 'R topics documented' at the front, but incorrectly (offset by -2 pages) in the Index at the back. Following the hyperlinked page numbers in the Index takes you to the wrong page. 2 pages happens to be the length of the package overview man page inserted

Hi.... I am assembling an R package (under Windows XP, R v.2.3) and have a very basic question. Running R CMD build does not generate a pdf. R CMD check generates a .dvi, but I cannot figure out how to automatically create the pdf. I thought from reading the "writing r extensions' manual that R CMD build was supposed to generate the pdf. I am having no success using various

> The command Rd2pdf was rather useful for opening a package's manual > when you don't have access to the Internet (by using latex to pdf > conversion). However the way the function seems to operate changed at > version 2.14 of R. The noted changes listed on CRAN for this function > are as follows (which doesn't seem like it would affect my usage as > below): >

Hello, I am running R 1.7.1 on two platforms and it seems to me that order() behaves differently on them. I noticed this when a test case passed in linux but failed on solaris. This is the behavior on the solaris platform: R.Version() $platform [1] "sparc-sun-solaris2.8" $arch [1] "sparc" $os [1] "solaris2.8" $system [1] "sparc, solaris2.8" $status

Hi, I'm new to R and I'm finding it quite a chore trawling through the R documentation to find a function to carry out simple atomic tasks. Is any one aware of R help documentation that is aranged in functional categories for e.g.: String manipulation File I/O Dataframe, List manipulation etc, etc ... Thanks _________________________________________________________________ Get

First I tried 'setenv R_SHELL /usr/local/bin/bash', as bash is the weapon of choice for the faculty wishing to use R, then ran ./configure as before. The ./configure output line using as R_SHELL for scripts ... /usr/local/bin/bash would seem to indicate that the R_SHELL environment variable was recognized and acknowledged. However, I got the same build error: gnumake[2]: Entering

Hi! Due to package maintenance I have removed some functions but forgot to update the coresponding Rd files. If R CMD check is checking for missing documentation entries why it does not check for documentation entries which tell the user about nonexisting funcitons? In my opinion checking for documentation entries that document non-existing functions is much more important than the other way

Hi, I run into following error when using heatmap() for data matrix "xx". Any help is appreciated? "xx" contains many "NA"s. > hv <- heatmap(data.matrix(xx)) Error in hclustfun(distfun(if (symm) x else t(x))) : NA/NaN/Inf in foreign function call (arg 11) Thanks a lot. Yuhong

Hi your guys, Recently, I installed R-1.9.1 on AIX 5.2 with 64 bits environment; I already have following software installed on AIX before I compile R-1.9.1 source codes: g++ 2.9.aix51.020209-4 The GNU C++ compiler and headers gcc 2.9.aix51.020209-4 The GNU gcc C compiler and headers xlf XL Fortran for AIX perl 5.6.1-2 zlib 1.1.3-10 For latex and makeinfo stuffs, I have

Dirk Eddelbuettel <edd at debian.org> writes: > On 28 October 2015 at 21:39, Marius Hofert wrote: > | Out of laziness I just used "R CMD batch" instead of "R CMD BATCH". I > | didn't get an error so didn't think about the consequences... One > | consequence is (at least on Mac OS X 10.11 but probably in more > | generality) that R_BATCH_OPTIONS are

Dear Team, Don't understand output below. Please advise. Windows98 and rw1041(patched) from 1/25/02. Graham Lawrence C:\>PATH=C:\bin;C:\mingw32;C:\Perl;C:\HtmlWork;C:\R\rw1041\bin;C:\Tcl;C:\Tcl\bin C:\>Rcmd INSTALL C:\R\lattice_0.4-0.tar.gz Bad command or file name C:\>Rcmd C:\>Rcmd Install Bad command or file name C:\>dir C:\R\rw1041\bin Volume in drive C has no

hi, can anyone confirm the following problem? when i do dos> rcmd rd2dvi --pdf my-package-name i get dos> Can't open perl script "c:\PROGRA~1\r\rw1091/bin/rd2dvi": No such file or directory might the problem be in (double back slashes rather than forward slashes) R-1.9.1\src\gnuwin32\front-ends\rcmdfn.c(251): strcat(cmd, RHome); strcat(cmd, "/bin/Rd2dvi.sh");

I noticed a shQuote fix for Windows in the svn logs. Just wanted to point out that this will favorably affect texi2dvi on Windows which previously used UNIX quoting and so generated an incorrect Windows command. (Note that texi2dvi is used when creating vignettes.) Another problem is that the recommended tex distribution for Windows, fptex, does not have texi2dvi in the first place. The

If I execute R CMD Rd2dvi foo.Rd I get messages of the form: Converting Rd files to LaTeX ... foo.Rd Creating dvi output from LaTeX ... Saving output to 'foo.dvi' ... cp: .Rd2dvi4366/Rd2.dvi: No such file or directory Done xdvi-xaw: Fatal error: foo.dvi: No such file. Indeed if I add the --no-clean flag and then cd to the .Rd2dvi<whatever> directory, I find that there is no

Is there any way of getting just the LaTex output which R CMD Rd2dvi generates on the way to produces a .dvi file, which could then be incoorporated into another document? Thanks, Jonathan -- Dr. Jonathan Myles e-mail:jonathan.myles at mrc-bsu.cam.ac.uk MRC Biostatistics Unit Tel. 01223 330372 Institute of Public Health FAX 01223 330388 University Forvie Site

R CMD build fails with recent R-devel because it is looking for texi2dvi in /usr/local/bin, but on this system, MacTex has installed it in /usr/bin. $ R CMD build IRanges * checking for file 'IRanges/DESCRIPTION' ... OK * preparing 'IRanges': * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... ERROR

Buenas noches Instale ubuntu 14.04, corro un archivo que me funcionaba en windows, pero no se que librería debería cargar (instalar) para solucionar el problema. El codigo R dice: function(x) tools::texi2pdf El error dice: Error en texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet, : Running 'texi2dvi' on ' Otro archivo se compilo sin problemas (lyx con sreave).