similar to: Compiling R under IBM-AIX using IBM native C-compiler

Hi (and Merry Christmas), I am trying to compile R on an AIX IBM machine using the native C and FORTRAN compilers... and everything goes smoothly (congratulations for the configure and make files, this is very nice)... until the pacakge 'cluster' (see dump below).... Any hint ? Laurent 1501-510 Compilation successful for file pam.f. cc -I/data1/laurent/R-1.6.1/include

...sorry for the spam, but answers I get to my previous question suggest that I should specify that the machine has a *lot* of memory and should be able to the instanciation... Anybody with an IBM mainframe, R-1.6.2 and large matrices ? L.

Dear all, The 'make check' step fails for the pacakge mva on IBM AIX. The tail of the Rout log file looks like: > for(factors in 2:4) print(update(Harman23.FA, factors = factors)) Call: factanal(factors = factors, covmat = Harman23.cor) Uniquenesses: height arm.span forearm lower.leg weight 0.170 0.107 0.166

Dear all, I compiled R-1.6.2 for IBM-AIX (using the native compilers) and I am facing problems to instanciate (rather) large matrices. I have: > m <- matrix(0, 640*640, 102) Error: cannot allocate vector of size 326400 Kb I am not truly familiar with AIX, but this does not seem to be caused by kernel/user limitations: ulimit -Ha gives: core file

Hi, I am trying to compile R for 64 bits on a mainframe running IBM AIX. Setting the environment variable OBJECT_MODE=64 leads to hanging while checking whether leap seconds are treated according to POSIX... Interestingly, it works fine when OBJECT_MODE=32... Any pointer would help me much... Thanks, L. -- -------------------------------------------------------------- currently at the

Hi, I get the wrong eigen values on an AIX machine with R-devel of 5/3/00. Here are the results: R> m <- matrix (c(6.8, 2.4, 2.4, 8.2), nrow=2) R> m [,1] [,2] [1,] 6.8 2.4 [2,] 2.4 8.2 R> eigen(m) $values [1] 19.281403 6.337993 $vectors [,1] [,2] [1,] 0.1918866 0.9967987 [2,] 0.9967987 -0.1918866 And for comparison, here is what I get on a Sun (with

Hi, This email reports bugs in acinclude.m4, src/library/tcltk/src/Makefile, and share/perl/Rd2contents.pl. It is based on R-patched.tgz from 07/27/2001 (R 1.3.0) and comes from trying to compile R on AIX 4.3. 1) acinclude.m4: A string on line 3096 starts with a single quote: ' but is terminated with a double quote: ". (This leads to the weird error message that configure can't

Dear all, I had to extracts/set elements from/in a matrix. Let say I have two vectors dim1 and dim2 of indices in the respective two dimensions of a matrix: I want to extract all the corresponding elements. I the case of a nxn matrix, dim1 <- 1:n and dim2 <- 1:n would extract the diagonal. I know one way would be to use the functions 'row' and 'col', but the matrixes I

On Thu, 10 Jun 1999, Friedrich Leisch wrote: > Yes, if I understood AIX workings correct you have to have a text file > of to-be-exported symbols at the time of linking a shared library, > i.e. the linker is called like (this is pasted from a mail by Arne) > > $(F77) -o module.so -bM:SRE -bE:module.exp -bnoentry $(OBJECTS) $(LIBDIR) $(LIBS) > > where module.exp is a text

Hi, this is not a bug report since this may not be a problem with R per se. The current release of R (1.1.0) will compile cleanly on an AIX box (I have 4.3.2) but it will fail upon startup with an Illegal Instruction. I've located the problem to be in do_strsplit when R calls regcomp. This function is defined in regex.c. However, the text from regex.o doesn't find its way into the

Hi, I'm determined to get R compiling & running on a machine running AIX 4.2. I've seen previous emails in the archive about this topic. The main obstacle is getting dynamic loading to work, but it works for Tcl and hence is feasable. Questions: - is anybody _currently_ working with R on AIX? - why have previous fixes to the sources not been introduced into the released

Hi, I'm determined to get R compiling & running on a machine running AIX 4.2. I've seen previous emails in the archive about this topic. The main obstacle is getting dynamic loading to work, but it works for Tcl and hence is feasable. Questions: - is anybody _currently_ working with R on AIX? - why have previous fixes to the sources not been introduced into the released

Hi there, I am interested if there is anyway to keep track of the occurrence of warning message. I know that warnings will only be printed out at the end of the program if warn=0. However I am also interested at which particular set of data does the warnings occur too. This is because I am running 1000 data, so if there are 2 or 3 data that give warnings, I would like to know which are the ones

Dear R-users, I am currently facing what appears to be a strange thing (at least to my humble understanding). If I understood correctly, starting with the version 1.2.3, R memory allocation can be done dynamically, and there is no need to fiddle with the --nsize and --vsize parameter any longer... So far this everything seemed to go this way (I saw the size of my processes growing when I was

> From: tov@phoenix.ece.cmu.edu > Date: Fri, 16 Jun 2000 16:32:36 +0200 (MET DST) > To: r-devel@stat.math.ethz.ch > Subject: [Rd] Missing -lm for tcltk (R 1.1.0, AIX 4.3) (PR#573) > CC: R-bugs@biostat.ku.dk > X-Loop: R-bugs@biostat.ku.dk > > Hi, > > ok, AIX 4.3 insists on being different. I can't compile --with-tcltk > out of the box. I have to add

Dear R-users, I currently have trouble in trying to compile R-1.3.0-patched on Compaq OSF1. -------- >uname -a OSF1 adenine.fysik.dtu.dk V4.0 1229 alpha -------- The 'configure' step ended seemingly corretly: ----------------------- R is now configured for alphaev6-dec-osf4.0f Source directory: . Installation directory: /home/adenine/sysman/laurent/share/ C

Dear everybody! I m seeking the package named hdarray for the analysis of microarrays data. It must not included in the base packages. Thanks in advance. Aboubakar Maitournam. -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "info", "help", or

Dear all, I may have overlooked something but the following piece of code causes me trouble: > a_data.frame(1:4) > a X1.4 1 1 2 2 3 3 4 4 > apply(a,2,cat) 1 2 3 4Error in ans[[1]] : subscript out of bounds > apply(a,1,cat) 1234NULL Is this the fact my data.frame has only one dimension ? (and do I forget somewhere (but where ?) to specify not to 'drop'

Full_Name: Paul Gutwin Version: R-1.0.0 OS: AIX 4.2.1 Submission from: (NULL) (198.133.22.67) R-1.0.0 fails to compile. I'm using the config.cache file from a successful compliation of R-0.65.0 (prob #290, fixed thanks to Thomas Vogels @ CMU). Compiling R-1.0.0 fails with the following error messages: make Target "R" is up to date. gcc -I. -I../include -I../../src/include

Dear all, The following causes me trouble: > a <- data.frame(2:5,3:6,4:7) > str(a) `data.frame': 4 obs. of 3 variables: $ X2.5: int 2 3 4 5 $ X3.6: int 3 4 5 6 $ X4.7: int 4 5 6 7 > str(data.matrix(a)) int [1:4, 1:3] 2 3 4 5 3 4 5 6 4 5 ... - attr(*, "dimnames")=List of 2 ..$ : chr [1:4] "1" "2" "3" "4" ..$ : chr