similar to: fexact.c

Displaying 20 results from an estimated 1000 matches similar to: "fexact.c"

2012 Mar 16
1
Segfault while calling fexact in C
Hi folks, I'm trying to call an R function (fisher.test) in my program for like a billion times! Though my program is in Python and I feel that using rpy2 to interface R to python doesn't give me satisfactory performance. So I looked into R code and found out that fisher.test is actually a wrapper around another function called fexact which is implemented in C. Using Cython I managed to
2002 Jun 13
2
fisher.test FEXACT memory bug "should not occur" (PR#1662)
This is a bad bug as reported by Robin Hankin, it is still in "R-patched" ... ##- From: Robin Hankin <r.hankin@auckland.ac.nz> ##- To: r-help@stat.math.ethz.ch ##- Subject: [R] possum sleeping: thanks and fisher.test() FEXACT error ##- Date: Thu, 13 Jun 2002 16:46:26 +1200 ## ..... ## Example slighlty modified (MM) d4 <- matrix(c(0, 0, 0, 0, 0, 0, 3, 0, 1, 0, 0, 0, 0, 0,
2004 Jun 17
1
Bug in FEXACT: gave negative key (PR#6986)
Hello, I'm using R to apply Fishers exact test to a whole pile of contingency tables, and I've run into the bug shown below. regards, Francis -- > dat1 = matrix(c(0,1,0,1,0,0,1,0,0,0,1,0,1,0,0,1,0,0,0,1,0,1,0,0,1,0,0,0,0, 1,1,0,0,1,0,0,1,0,0,1,0,0,3,0,0,2,0,0,1,0,0,0,1,0,0,2,0,0, 2,0,0,1,0,1,0,0,3,0,0,2,0,0,0,1,0,5,0,0,0,1,0,1,0,0), nrow=3) >
2004 Jul 23
2
fisher.test FEXACT error 7
Hello, I have an error message that doesn't seem to make sense in that having read the R documentation I was under the impression that R was able to grab as much memory as it needed, and has been able to do so for some time, so the advice given below about increasing the size of the workspace is redundant. If I'm right, does anyone have a solution to the problem of the size of
2009 Mar 20
1
fisher.test - FEXACT error 7
Dear all, I’m having an awkward problem in R. When I write the command Fisher.test(school.data,workspace=2e+07), where school.data is the matrix corresponding to the data set, I get the error message: FEXACT error 7. LDSTP is too small for this problem. Try increasing the size of the workspace. Increasing the workspace: Fisher.test(school.data,workspace=1e+10), I
2015 Oct 09
4
[PATCH 1/2] kvm/x86: Hyper-V synthetic interrupt controller
Christian, the question for you is towards the end... On 09/10/2015 15:39, Denis V. Lunev wrote: > diff --git a/arch/x86/kvm/hyperv.c b/arch/x86/kvm/hyperv.c > index 62cf8c9..15c3c02 100644 > --- a/arch/x86/kvm/hyperv.c > +++ b/arch/x86/kvm/hyperv.c > @@ -23,13 +23,265 @@ > > #include "x86.h" > #include "lapic.h" > +#include "ioapic.h"
2015 Oct 09
4
[PATCH 1/2] kvm/x86: Hyper-V synthetic interrupt controller
Christian, the question for you is towards the end... On 09/10/2015 15:39, Denis V. Lunev wrote: > diff --git a/arch/x86/kvm/hyperv.c b/arch/x86/kvm/hyperv.c > index 62cf8c9..15c3c02 100644 > --- a/arch/x86/kvm/hyperv.c > +++ b/arch/x86/kvm/hyperv.c > @@ -23,13 +23,265 @@ > > #include "x86.h" > #include "lapic.h" > +#include "ioapic.h"
2015 Oct 09
5
[PATCH 0/2] Hyper-V synthetic interrupt controller
This patchset implements the KVM part of the synthetic interrupt controller (synic) which is a building block of the Hyper-V paravirtualized device bus (vmbus). Synic is a lapic extension, which is controlled via MSRs and maintains for each vCPU - 16 synthetic interrupt "lines" (SINT's); each can be configured to trigger a specific interrupt vector optionally with auto-EOI
2015 Oct 09
5
[PATCH 0/2] Hyper-V synthetic interrupt controller
This patchset implements the KVM part of the synthetic interrupt controller (synic) which is a building block of the Hyper-V paravirtualized device bus (vmbus). Synic is a lapic extension, which is controlled via MSRs and maintains for each vCPU - 16 synthetic interrupt "lines" (SINT's); each can be configured to trigger a specific interrupt vector optionally with auto-EOI
2004 Jun 17
2
using "= matrix (...)" in .C calls
Dear R-devel, I am trying to alter rpart so that it makes additional calculations when growing the tree. In the "rpart.s" there is a call to the C routine: rp <- .C("s_to_rp2", as.integer(nobs), as.integer(nsplit), as.integer(nodes), as.integer(ncat),
2002 Jun 13
0
possum sleeping: thanks and fisher.test() FEXACT error
Dear helplist Many many thanks to everyone who helped me. The trick was to use tabulate() or, better, tab <- rep(0,50) names(tab) <- 1:50 tab[names(table(sleeps))] <- table(c) My original dataset was a list of 50 trees and a length 12 vector recording which tree a certain possum slept in on 12 nights. As Professor Ripley points out, a Monte-Carlo simulation is easy to set up, and it
2015 Oct 16
10
[PATCH v2 0/9] Hyper-V synthetic interrupt controller
This patchset implements the KVM part of the synthetic interrupt controller (SynIC) which is a building block of the Hyper-V paravirtualized device bus (vmbus). SynIC is a lapic extension, which is controlled via MSRs and maintains for each vCPU - 16 synthetic interrupt "lines" (SINT's); each can be configured to trigger a specific interrupt vector optionally with auto-EOI
2015 Oct 16
10
[PATCH v2 0/9] Hyper-V synthetic interrupt controller
This patchset implements the KVM part of the synthetic interrupt controller (SynIC) which is a building block of the Hyper-V paravirtualized device bus (vmbus). SynIC is a lapic extension, which is controlled via MSRs and maintains for each vCPU - 16 synthetic interrupt "lines" (SINT's); each can be configured to trigger a specific interrupt vector optionally with auto-EOI
2009 May 12
2
[LLVMdev] Compiler error: LoopStrengthReduce.cpp
The error given: ..\..\..\..\trunk\lib\Transforms\Scalar\LoopStrengthReduce.cpp(1016) : error C2668: 'abs' : ambiguous call to overloaded function f:\Program Files\Microsoft Visual Studio 8\VC\include\math.h(539): could be 'long double abs(long double)' f:\Program Files\Microsoft Visual Studio 8\VC\include\math.h(491): or 'float abs(float)'
2010 Mar 09
2
speed
Hi, I have found some example of R code : http://commons.wikimedia.org/wiki/File:Mandelbrot_Creation_Animation_%28800x600%29.gif When I run this code on my computer it takes few seconds. I wanted to make similar program in Maxima CAS : http://thread.gmane.org/gmane.comp.mathematics.maxima.general/29949/focus=29968 for example : f(x,y,n) := block([i:0, c:x+y*%i,ER:4,iMax:n,z:0], while
2010 Mar 19
1
chron package install fail in intel I7 - fedora 12
install packages chron fail in Fedora 12, cpu I7/860 See down. Regard, Juan S. Ramseyer. > install.packages() Loading Tcl/Tk interface ... done --- Please select a CRAN mirror for use in this session --- Warning in install.packages() : argument 'lib' is missing: using '/usr/lib64/R/library' tentando a URL
2010 Apr 15
0
[LLVMdev] darwin dragon-egg build issues
Duncan, Do a quick check here on x86_64-apple-darwin10 with svn llvm and svn dragon-egg against release gcc 4.5.0, the results from the himenoBMTxpa benchmark compiled at -O3 look pretty good. With stock gcc-4.5.0, we get... Grid-size = M mimax = 128 mjmax = 128 mkmax = 256 imax = 127 jmax = 127 kmax =255 Start rehearsal measurement process. Measure the performance in 3 times. MFLOPS:
2010 Feb 17
1
crhon compile directive faul in version x64, in Intel i7?
==> CRASH INSTALLING PACKAGES CHRON IN: Intel(R) Core(TM) i7 CPU 860 @ 2800GHz ==> IT'S COMPILED DIRECTIVE WRONG? REGARD YOUR ATENTION ==> I RUN: SO:Linux 2.6.31.12-174.2.19.fc12.x86_64 x86_64 Fedora release 12 (Constantine) ==> AND RECEIVE NEXT MESSAGENS IN INSTALLING: > install.packages() Loading Tcl/Tk interface ... done --- Please select a CRAN mirror for use in this
2016 Feb 15
1
[PATCH 09/23] nv50-: separate vertex formats from surface format descriptions
Why not fix the new names instead to be like the old names? Seems like that would be way simpler... On Feb 15, 2016 12:38 AM, "Ben Skeggs" <skeggsb at gmail.com> wrote: > From: Ben Skeggs <bskeggs at redhat.com> > > We've previously had identical naming between vertex and texture > formats, so it mostly made sense to define these together. > > However,
2008 Jul 08
1
fisher.test
Hi! I am Marta Colombo, student in Mathematical Engineering at "Politecnico di Milano". For my master degree thesis I have to analyze some categorical data. My dataset is composed by 327 individuals and 16 variables. I am using Fisher exact test to test independence on IxJ contingency tables, but I have a problem with one variable. R gives me this error message: FEXACT error 7.