similar to: boot&table

Dear All, I need to calculate the variance components in a mixed effect model (one fixed and one random effect) with REML (maximizing the proportion of the likelihood that does not depend on the fixed effects). In S+ there is the varcomp function, but I would like to do it in R. Is there a way to do that? Thanks! Katalin ___ Katalin Csillery Division of Biological Sciences University of

Dear All, I have a function which takes a n x m matrix as an argument and returns an n x n matrix. I want to take bootstrap samples form the input matrix in the way as each row represent a multivariate observation, so each bootstrap sample would be an n x m matrix, and on each sample I want to calculate the n x n matrix. This task can be done with the sample function, but I would like to use

Does anyone know how to coerce a list to an array? I have a list with equal sized matrixes and I want to coerce it to a 3D array. Why is that that I cannot feed in equal sized matrixes as layers to an array even if I set dim 3? Thanks! Katalin ___ Katalin Csillery Division of Biological Sciences University of Montana, Missoula MT 59801 Phone: 406 243 6106, E-mail: csillery at selway.umt.edu

Hi, does anyone know how to make pairs of boxplots? E.g. 5 pairs of boxes. I figured a not very elegant way, by inserting a dummy NA field to the list where the data is given. So, where I have the dummy I got more distance between boxes, as a result it looks like groups. But I am having problems with putting the names under the groups, and the thick marks. Any better idea? Thanks, Kati ___

Hi, I have a coding problem. I have data pairs, and I want to calculate a parameter for the data pairs as a whole data set (so not using the information that thely are pairs) I am looking for bias in that certain parameter so I want to bootstrap these data pairs(!), and than calculate the parameter. I run into a coding problem. How should I define theta in order to resample the pairs, but than

Dear All, I am trying to use the bca.ci function on a boot.out object which consists a few NaN's and I want to ignore those NaN's, and get a ci only for the "normal" values. boot.out$t has R number of values for 3000 different statistics, so when I use boot.ci(boot.out, index=i) and i happens to be a column in boot.out$t with some NaN's in there I get an error message. I

Hi, I have a function which does a certain task with two vectors, f1 <- function(a,b){body} I also have a list of matrixes (all with the same dim's), and for each column of each matrix in the list I want to use "f1", in such way that it gives the vector "a" in the first argument of "f1". The second argument of the function "b" also comes form a

Hi, I've been using R 1.7.1 but now I need to upgrade to R-1.9.1. Since it is not on the Fink tree yet I tried to install it from source to my sw library. The configuration runs fine, but make doesn't. Here is the error message I get: /sw/lib/libg2c.a(err.o) definition of common f(short, void, int, char) (size 4) /usr/bin/libtool: internal link edit command failed make[4]: ***

dear group members, I am looking for a function that assess the stability of cluster. The result of hclust function is an hclust object which can be plot as a dendrogram. However to have confidence in the tree topology usualy bootstap is applied. I understand that I can apply bootstarp on the original data and then run hclust(dist() ) as much as I resampled but how to comapre the topologies the I

I use Ubuntu12.04, GNU Make 3.81 and I am not sure if I use some special configure options. The commands I use after clone the repo are as follows: cd xapian ./bootstarp ./configure make cd xapian-letor aclocal -I ../xapian-core/m4 libtoolize --force autoconf autoheader automake --add-missing ./configure make Is this normal? 2014-12-07 22:37 GMT+08:00 James Aylett <james-xapian at

Beyond a general problem with X11, that it sometimes doesn't display -especially when it is inactive for a while- new windows (like new terminal, R device, or emacs) and only the restart helps, I found a problem which might also be especially the X11's problem. >From an apple Terminal window, the following code (which is the first boot.ci example) works just fine.

Encountering a strange one... has been occuring since samba 4.15.x and continues to occur even in 4.17.5 and 4.18 Issue does not occur in earlier versions (4.13.x) and have switched back and forth between versions to confirm. Servers are winbind joined, PAM and krb5 auth, all seems to work fine (reading, writing, creating, moving) until trying to delete an empty folder on the share from Windows

Dear all, I've a problem with bootstarp package... I want to bootstrap correlation ratio of some data. my code is: f<-function(d) cov(d$x,d$y)/sqrt(var(x)*var(y)) boot(d,f,R) As a result I got an error: Error in statistic(data, original, ...) : unused argument(s) (.. .) d is a data.frame containing two vectors with labels x and y. Also, another thing I have problem

On Wed, Mar 15, 2023 at 04:53:16PM +0000, Rowland Penny via samba wrote: > > >On 15/03/2023 16:47, Jeremy Allison via samba wrote: >>On Wed, Mar 15, 2023 at 11:29:10AM -0400, CaptainTrips28 via samba wrote: >>>Encountering a strange one... has been occuring since samba 4.15.x and >>>continues to occur even in 4.17.5 and 4.18 >>> >>>Issue does not

Hi I am on Debian verson 7.7, GCC 4.7.2 and make 3.8.1. I cloned the code : git clone https://github.com/v-hasu/xapian git checkout gsoc2014-evaluation rm xapian-letor/nobootstrap ./bootstrap ./configure --no-documentation make CXXFLAGS='-w' and I get a different set of errors --- ranker.cc: In member function 'std::string Xapian::Ranker::get_cwd()': ranker.cc:80:36: error:

Hi~ Manu I was glad to see you were interested in Xapian, especially the learning to rank project. There are two branch in my repo. The one named gsoc2014 is followed the thought of Parth's work in which we not assign the test set for each ranking and in another one gsoc2014-evaluation we assign the training set and test set explicitly so that we can get the evaluation score of each ranking

Hello, I am doing a simple linear regression analysis that includes few variables. I am using a bootstrap analysis to obtain the variation of my variables to replacement. I am trying to obtain the coefficients 95% confidence interval from the bootstrap procedure. Here is my script for the bootstrap: N = length (data_Pb[,1]) B = 10000 stor.r2 = rep(0,B) stor.r2 = rep(0,B) stor.inter =

Hello list I have a problem that i am confronting for long time and i dont get a result. We use samba 3.0.24 (also tried other versions) with openldap and the smbldap-tools on Suse Linux SLES9. We use openldap for user authentikation for samba (objectClass: sambaSamAccount) and other application like email, apache, squid (objectClass: shadowAccount and objectClass: posixAccount). My scope

Dear All, I have problem installing the 'kinship' package. I used the 'install.packages' from R command line and had no problem installing other packages before. Here is what I get: * Installing *source* package 'kinship' ... ** libs gcc -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/usr/local/include -fno-common -g -O2 -c agfit6b.c -o agfit6b.o

Hi everyone: Polyclass is a polytomous logistic regression model using linear splines and their tensor products. It provides estimates for conditional class probabilities which can then be used to predict class labels. I know there is Polyclass package in S-plus. So I'm wondering if there is a corresponding package in R? I have been searching for it for quite a while, but still